Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00019 ATGATAACTATGGGAGAAACACAAAAAGAGGTTATGTgggagaaagaggaagaagaagaagctcaaGTCAGTATGTGGAAGTACATATTTGGGTTTTCTGAAATGGCAGTTGTAAGATGTGCTATCGATCTTAAAATAGCAGATGCCATTGAAAGCCATGGAAGCCCCATGACACTATCCCAGTTATCATCAACTCTAGACTGTGATTCTTCCCTTCTCCTCCGCATCATGAGATTTCTGATCCACCGCaagattttcaaagaaataccCACCAACCATGGCTCCCCAAGCTATGCTCAAACCCCACTTTCTGCCCCATTTGAGAAGGCTCATGGTGAAGATTTTTGGAGCTATTCAGCAGCAAATCATGGTCACAGTGAAATCTTCAATGAAGCAATGGCTAGTGATACTAGGTTTTGTGTTCCTATGATAATTGAACGCTGTGCTGAGGCATTTGATGGGGTGAACACTGTGGTGGATGTTGCTGGGGGAAATGGCACTGCCATGGGTGTGTTAGTTAAGGCATGCCCTTGGATCAAAGCCATTAACTTTGATTGTCCCCATGTTGTCTCTGCGGCCAAAACTTATGATGGTGTGGAGCATGTGGGAGGTGACATGTTTCCAGAGTTCCTAAAGCAGATGATGTCTTTCTTAAGgaaaTGTAGAGAAGCtatcccaaaagaaaatggaagggtTATAATTGTTGATGCTGTGATTGATGAAGATGGAAACAAAGAGGACAGGTTTAAGGATGTGAAGTTGATGGTAGACATGGTAATGATGGCTCCTACTACAATGGGCAAAGAGAGGGAATGGGACTA 821 0.3971 MITMGETQKEVMWEKEEEEEAQVSMWKYIFGFSEMAVVRCAIDLKIADAIESHGSPMTLSQLSSTLDCDSSLLLRIMRFLIHRKIFKEIPTNHGSPSYAQTPLSAPFEKAHGEDFWSYSAANHGHSEIFNEAMASDTRFCVPMIIERCAEAFDGVNTVVDVAGGNGTAMGVLVKACPWIKAINFDCPHVVSAAKTYDGVEHVGGDMFPEFLKQMMSFLRKCREAIPKENGRVIIVDAVIDEDGNKEDRFKDVKLMVDMVMMAPTTMGKEREWD 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00019 273 Pfam Dimerisation domain 37 80 IPR012967 GO:0046983
Bva02g00019 273 SUPERFAMILY "Winged helix" DNA-binding domain 16 109 IPR036390 -
Bva02g00019 273 Gene3D - 8 105 IPR036388 -
Bva02g00019 273 PANTHER 3'-HYDROXY-N-METHYL-(S)-COCLAURINE 4'-O-METHYLTRANSFERASE 2-LIKE 10 104 - -
Bva02g00019 273 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 105 272 IPR029063 -
Bva02g00019 273 PANTHER 3'-HYDROXY-N-METHYL-(S)-COCLAURINE 4'-O-METHYLTRANSFERASE 2-LIKE 104 271 - -
Bva02g00019 273 PANTHER O-METHYLTRANSFERASE 10 104 IPR016461 GO:0008168
Bva02g00019 273 Pfam O-methyltransferase domain 105 271 IPR001077 GO:0008171
Bva02g00019 273 Gene3D Vaccinia Virus protein VP39 113 273 IPR029063 -
Bva02g00019 273 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 273 IPR016461 GO:0008168
Bva02g00019 273 PANTHER O-METHYLTRANSFERASE 104 271 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00019 Bva-Chr2 271520 272595 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00019 38 270 Monolignol Biosynthesis Gene Families AT5G54160 27.027 3.96e-28 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00019 K22588 - jre:108999749 291.582