Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bva02g00009 | ATGAATATCCCTCACAAGAAAAGAAcactcttttctctctttgtcCTCAGTATCCTTGTTCTCCCAACCCAAGTTTCTGCTAAATGTAAAtgtgatgaagaagatgaagaccGCGATAGGACACAAGCTCTCAAGTTCAAAATAGTAGCCATAGCTTCAATAGCAGTTGCTAGTGCTATTGTGGGTTTGTGGCTATGTGCACTGCCACGGGAACCGGTTGATGCTTTTGCAACTATGTATTTCAACGAATCTCATGTAAATAAAGGTCAAGATGAGGTACCAAGCGAAGAAGGGCGTTTGCCTATTCATACCCACACATCACATGGTCATGCACTTGGCTCAGATGTATTGGAGCTTGGTATTGTTGTTCATTCTGTGATAATAGGAATTTCTTTGGGAGCATCAGAGAGTCCGAAAGCAATAAAGCCTTTAATAGCTGCATTGACTTTCCATCAATTTTTTGAAGGCATGGGACTCAGTAGCTGTATGACTCGGGCTAAATTCAAGAGTATTGTTGTTATAATGATGGCATTGTTCTTCTCTCTTACTACACCAGCGGGCATTGCAATTGTATTAGGGATAAGCAATGTTTATGACAAGAACAGTCCAACTGCACTTGTCGTAGAAGGAATTTTAAATGCAGCATCAGCTGGGATCTTAATCTATATGGCACTTGTGGATCTTCTTGCAGCTGATTTTATGAATCCAAGGATGCAAAATAGTATTATGCTTCAAATGTTAGCAAATGTATCTCTGCTTCTAGGGGCTGGTTTGGCGTCTCTTCTTGCCAAATGGGCTTA | 800 | 0.3862 | MNIPHKKRTLFSLFVLSILVLPTQVSAKCKCDEEDEDRDRTQALKFKIVAIASIAVASAIVGLWLCALPREPVDAFATMYFNESHVNKGQDEVPSEEGRLPIHTHTSHGHALGSDVLELGIVVHSVIIGISLGASESPKAIKPLIAALTFHQFFEGMGLSSCMTRAKFKSIVVIMMALFFSLTTPAGIAIVLGISNVYDKNSPTALVVEGILNAASAGILIYMALVDLLAADFMNPRMQNSIMLQMLANVSLLLGAGLASLLAKWA | 266 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bva02g00009 | 266 | PANTHER | ZINC TRANSPORTER 1 | 72 | 266 | - | - | |
| Bva02g00009 | 266 | PANTHER | ZINC TRANSPORTER 1 | 17 | 65 | - | - | |
| Bva02g00009 | 266 | PANTHER | ZINC/IRON TRANSPORTER | 17 | 65 | - | - | |
| Bva02g00009 | 266 | TIGRFAM | zip: ZIP zinc/iron transport family | 108 | 266 | IPR004698 | GO:0005385|GO:0016021|GO:0071577 | |
| Bva02g00009 | 266 | PANTHER | ZINC/IRON TRANSPORTER | 72 | 266 | - | - | |
| Bva02g00009 | 266 | Pfam | ZIP Zinc transporter | 104 | 263 | IPR003689 | GO:0016020|GO:0030001|GO:0046873|GO:0055085 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bva02g00009 | Bva-Chr2 | 121296 | 123622 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Bva02g00009 | 73 | 266 | Inorganic Solute Cotransporters | AT3G12750 | 56.542 | 2.21e-69 | 216 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bva02g00009 | K14709 | - | vvi:100255284 | 233.417 |