Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00004 ATGAGGCATGATCATTCAGAGGGTATAGTTGTAATTTGCTCTAAAATACATTTCTCTCCTTTCTACTCTCGCTTTTCCCTTCTTTCCCCTCATTCTAGAGCTCCCATTCTCTCTCCTAGGTTCAGAACTTTTCCAACGAGACTCTTCTTCGACATTTTAGTCAATGTAAACTTTGTTGAGATCAAATTTGCTGCTGCTGTTATCAGTAAGACAGgagAAAGCACATTTGGTTCATATTTCCTTGAAGGAGCAACAATGGAAGTTCTCATTTCAATTGCTGCCAAAATTGCTGAGTACACTGTGGCACCAATAGGACGACAAGTTGGTTATGTGTTATTCTACAAAGGCAATTTGAAGGAGTTAAATGAAGCAGCAAAGGAGCTTGAGGTTGCAAGAGAAAGTATCAAACATTTGGTTGATGCTGAAATAAGAAACGGAAAAGAAATTCTAGCTGTTGTGCAGGATTGGCTGAAAAATGTGGATGATATCACAGAAGAGGCCAAACAACTTTGGGAAGATCCACAGCATGCCAATGCAGGATGTTCCAAATGGTCATTTCCCGATCTGAAGTCTCGACATCAATTGAGCAGAAAAGCCAAGAAGATGGTGAAACGTGTTGCTGATGTCAACCAGAAAAGAAACTTTGATATTGATAGCATTAGTTATCTCCCTGCTCTACAGATTATTCGTCCTAGTACAGCTTTAAGAAGTAATGAAAGGTTTGAGTCAAGGCATTCAGTGATGAAGCAGATTATGAGGGCCTTAGCTGACTCTAAACTGAGCAAGATAGGAGTTTATGGGCTTGGTGGTGTGGGTAAGACCACCCTTATGAAGGAAATTGCAGCAAAGGTTAGGGATGACAAGCTATTTGATGCAGTTGTCATGGCATTTGTGACAAAATCCCCGGATATTACAAGAATTCAAGATGAAATTGCAGACCAGTTGGGTCTCCAATTTGGTGAAAAATCTTCATTTGGCAGAGCATGCCGCCTACATGACAGGATTGAAAGGGAGAAATCTATTCTTATCATTCTGGATGATTTGTGTACAAAGCTTGATTTGGAGGAAGTGGGAATACCTTTTCGGGATGCACAAGAGTatttgaaaagagaaatgaaaagtaTCCATCCTGGTTGCAAATTGTTGCTAACCTCCATAAATGGAGAAGTCTTACAAGAaatgaaaactgaaaagaattttagaCTAGAAGTTTTAAACCAAACTGAAACATGGAGCTTGTTTGCAGACATGGTTGGTGATGCTATTAGAGATCCGAGTTTACGAAGCATAGCCATTGACGTGGCTAAAAAATGCAATGGTTTGCCTGTTCTTATAACGACCATAGCAAGGGCAGTGAGAAATAAAGGTATTGATGAATGGAAAGAGGCCATAAAGAAACTTGAAAGAGTCGACAATACAGATGCTTATTTGGCTTTGGAATTCTGTTACAACTCGTTGGGGAGCAATGAAGTGAAGGCTCTCTTCTTGCTCTGTGGCATCGTGGGACCATCCGTTGAAGTAGAATACTTGTTGAAATGTGCTATGGGGTTGGGTATGTTCAAAGACATAACAACCATGGAAGGTGCAAGGAAAAAACTTCGTGAAATGATTGTTGCCCTCCAGGCATCTTGCTTGCTACTTGAAAGTGATACAACTGTGGAAGTCAAAATGCATGATATCGTTCGTGAAGTTGCTATCTCAATTGCTCATAGGGATCAACATGTTTACATAGCTAAAGAGGGCTCCAAGTCATTTGAATGGCCCACTcagaattttctaaaaaagtgctccatcatcaaattaaaatggtGTCCCATCCACACGCTTCCTAAAAAGTTACATTGCCCTAAGATTAAGTTTTTACTCCTTGAGAGTGGTAATCGCTTTTTGGAAATACCAACTTTGTTTTTTGAGGGGATGAGAAACCTTAAAGTTTTAGATTTAACAGCAATGAACTTGATTTCCTTTCCTacatcttttctttccctaaCCAACCTTCAAACTTTATGCTTGGATCAATGTGCTTTGGAAGATATTACTTCAATAGGAGCCTTGAAGAATCTAGAAATTCTTAGCCTCATCCACTCGTCCATTACAAAATTTCCTAGTGAAATAGCAGAATTGATAAATCTCAAAATGTTAGATTTGAGCAATTCTGGGATTGAAGTCATCCCATCCAACATCatatcaaagttgaccaaattagAGGAGCTGTATATGGGCAACACCTCCATCAAGTGGGAGCATGAAAATTCAGTTAACGAACACAAAAATGCTAGCCTTGCTGAACTCAGGCAGTTGCCTAACTTGACTGCTCTAGATTTACAAATTCCAGAGGCTTGGATGTTGCCTAGAGACTTACTGTTTGGGAAACtagaaagatataaaatatttatcggTGACGTATGGGAATGGTCAGGCAAGTATGAATCCTCAAAAACATTAAAGCTAAAGCTCCACACAAGTATTCATCTAGAGCATGGGATTAAACTTCTGCTTAGAATAGTGGAAGATTTGCACTTGGATGAGTTGAGTGGCATTTCAAATGTGCTTTTCGAATTAAATGGGGAAGGATTTCCATGTTTAAAACATCTCTATATTCAAAACAATGCTGAAATTAAGTATATCGTTGATTCAATTGGCTGGATTGTATCCGAGCAATCTTTCCCCAAGTTAGAGACTCTAACACTTCAGAATCTCAACAATTTGGAAAAGATTTGTCATGGACAACTAATGGTTAATTCATTCAGCAATCTTAaggaaatcaaaatcaaaagctgTGATAGATTAAGATATCTTATCTCATGTTCAATGGCCAATCAACTTCCACAACTGCTGGAACTGGAAGTTTCAGAATGTAAGTCCATGAAAACGATTTTGCATGTTGAAAGAGATGCAAGTGTTGATGGGGGCACAATTGAGTTTCACCAACTGCGCTCTTTGGCTTTACAAAGTCTACCATTACTTGATGAATTCTACTCTGATGAGTTGAAGTCTCCAACAATAGTACCAACGTGCAAGCAATTAGTGACTTATATTCAAAGGCCACTTTTTAGCAAAAAGGTAgtatttttgaatttggagACGTTGAAGCTAAGTTCAATTAATCTGAAAAAAATATGGGAAGGCAATTCATCAGCTACTTTTGTTCAAAATTTGACTCATTTGACCGTAGAGGACTGTGGTGCCCTAAAGTACTTATTCTCAACCTCCAAGGTTTCCAATTTTCCAAAACTCAAATGGCTTGAAATAAGGAAATGCCATATGATGGAGGAGATTATGGAAACAACAAGCAACGTTGTATTTTCTGAAGTTCAGTTTCTCAAACtggaaaagataataataaatgacatGCAAAACTTGAAGACAATATGGCACCCTGCAAGTTCCTTTGGTGAATTGAAAACTCTGGAAGTCAAAAGCTGTCCAAGACTTGCAAATGTCTTTCCATCTTATATGCAGAGAAAATTTGGCAACCTAGAGACATTGACAGTTAGTGATTGTGATTCAATGGAAGTGATATTTCAGTTGGATGCCAATGAAACTTTCAGTGAAGAGGATAGAACAGAATTGAAAAGCATGACTTTATGTAGGCTGCCTAAGCTAAAGCAGATATGGAGTAGGGAACCCCAaggaattctttcttttcacagtctacaattagtaaatattcaAATCTGTTGGGAGTTGGAATACATCTTTCCATTCTCTATAGCTGCAAACCTTCATCTGCTGGAAGAACTCTTCCTAGATGAGTGTGGCTTGACGTTTgttgttgaaagaaaagatggTCAGATGGAGGGGAAGCCCGTATTTGTGCTCAAGAGTCTCAAATCCCTATATCTTTGGAATTTAAAGAATCTCAAGGGTTTCTACGCTGGGATTCATAATCTGTCCTGTTCATCcttgaaagaaatatatgtatttggtTGCTACAAGTTGAGAATATTCAAGACGATGTCTACAAGTGAAATAAGATATCTTGATGACATAGTATATGGGCGACCTTTATTCTCATTCGAAGAgGTGATGCCCAACTTGGAGCAGTTAACATTACGCAATGAGGATGCCAGCATTGTATTGGATCAATTATCAAGGCAACTGTTCAGCAAGCTAAAAGTTCTTAGGGTGTCCAGGTTTGAAAATGAGGAAGCCACCTTTCCATATTGGTTTCTGCAAAATATACAAGCTCTTGAGATGTTGGCTGTTGAATATAGTTCTTTCAATGAGATATTTCAAGATGAAAAACATGAATGTGGGGAAGGAAATGTTGAAAGTAGCACACAGCTCAAAGAGTTGAGACTGCGGTTTTGCTCAAGCAAGTGCCTCCTAAGATTCAAATTGTTGGAAAAAGTAGTTGTGAAGCAATGCCCACGGATGAATACTTTCTCCAATGGATCCACATCTGCAGTAAAACTTCGCAAAGttcaaatagaagaaagtgATGATGAGCGTTACTGGGAGGTGGACCTAAACCAAACAATCAGAAAGATGCACTTAGAAAAGGTGGCATTTCATGGCTTCAAGCTTTTGGAGCTATCTGAATATCCTGAGCTGAAAGAATTATGGTATGATGGGCCGTATAGCCACGGTGGGCACCATATATTTGCCAATTTGAAATCATTAAGGGTGAagaaatgtgattttttatcAGACgtaattttttcatcaaatttacTGCAAGTTCTTTGCAATCTGGAAGAGTTGGAAGTAACAGACTGTGCTTCATTGGAAGCACTAATTGATGTGAAAGGTGTCAATGGTAAAGAGATGCAGATGAAAGAAATCAGTcagttgaaaaaatttaagctcTCTGGTCTGCCAAATCTGAAGCACATATGGAACAAGGAAACTCATAGAATCATCAGCTTCAAGAATCTGCTTACAGTGGACGTTGTCGACTGTGAAAACTTGGAAAGTCTGTTTCCAGTATCACTAAGCAAAGATCTTGTTCAGCTTCAAGAGGTGGACATAGAGTCTAGTGGACTTGTAGAAATTTTCTCAACGGAAGATGGTTTAGAGGAATGTAGGTTTGATTTCCCTCAGTTGACCAAATTGAGACTATGGAATCTGACCAAACTCAAGTGTTTCTACCGTGGAAGGCATATTCTAGACTGCCCTTCattgaagaatttaaatatttatcattgtGGAACATTGCAAACATTTTCCTTCGGCCATTCAGTCTTCCAGCAGGCGAATGGGATGGGTGAAGATGAATTTCCACAAGCCCTTTTTCCACTCGAAAAGGTATGCACCAAACTCGAGTTGATGACATTAAATGGGAATGACATGAAGAGAATAGCAAATGACAACTTTGAAGAATCTCTCTTTGACAAAATAGTAGATCTTCGTATCCAATGCTTTCATGAAACTCATGATGATTTTCcaattgattttcttcaaaGATTTCCAAATCTAGTAACACTTTGGGTGCGCTGTTGTTCTTTCAATTCACTATTCCCATTGAAAGGAGTTGGTCATCAATATATAGGAGCTCCCTTACATATAAGAGAGTTGATTCTCTATAAAATGGAACAGCTTAAATATATCTGGGAAGAAGACATTCTGTCATCAGGACATGCTGAAACACTTGACTCTCTACCATCTTCAATATCTGTCAAAAATTTAACCATTTTGCAAATGGAAGACTGCAAAGAGCTGGTGTATTTGCTTACAAAAAGTGTTGCTAAAAGTTTATTGCAActcaaaatcatatatatagaaaactgTGAGAGCATGGTGGATGTAGTAAAGAATGATGAAGAAGCAGCTGAAGAGATCATTACATTCAAGAATTTGGAACGTCtgactttgatttctctgtCAAGCTTGAAAAGTTTCTGCTCTGGGAAACAAACATTCATATTCCCATCGTTGGTAGGGTTAAAAGTAAAAGGATGTCCTAAAATGAACATTTTCTCTTCAGGAGTAGTAACAGCACCGTTGCTCCAATCAGTAACAGTGGAGGATGAAAGAGAGCATTGGAAAGGTGACCTTAACACCACTATTCTACAACTGTTCAATGGCAAGGTGATCCGAGATAGTTA 6050 0.3626 MRHDHSEGIVVICSKIHFSPFYSRFSLLSPHSRAPILSPRFRTFPTRLFFDILVNVNFVEIKFAAAVISKTGESTFGSYFLEGATMEVLISIAAKIAEYTVAPIGRQVGYVLFYKGNLKELNEAAKELEVARESIKHLVDAEIRNGKEILAVVQDWLKNVDDITEEAKQLWEDPQHANAGCSKWSFPDLKSRHQLSRKAKKMVKRVADVNQKRNFDIDSISYLPALQIIRPSTALRSNERFESRHSVMKQIMRALADSKLSKIGVYGLGGVGKTTLMKEIAAKVRDDKLFDAVVMAFVTKSPDITRIQDEIADQLGLQFGEKSSFGRACRLHDRIEREKSILIILDDLCTKLDLEEVGIPFRDAQEYLKREMKSIHPGCKLLLTSINGEVLQEMKTEKNFRLEVLNQTETWSLFADMVGDAIRDPSLRSIAIDVAKKCNGLPVLITTIARAVRNKGIDEWKEAIKKLERVDNTDAYLALEFCYNSLGSNEVKALFLLCGIVGPSVEVEYLLKCAMGLGMFKDITTMEGARKKLREMIVALQASCLLLESDTTVEVKMHDIVREVAISIAHRDQHVYIAKEGSKSFEWPTQNFLKKCSIIKLKWCPIHTLPKKLHCPKIKFLLLESGNRFLEIPTLFFEGMRNLKVLDLTAMNLISFPTSFLSLTNLQTLCLDQCALEDITSIGALKNLEILSLIHSSITKFPSEIAELINLKMLDLSNSGIEVIPSNIISKLTKLEELYMGNTSIKWEHENSVNEHKNASLAELRQLPNLTALDLQIPEAWMLPRDLLFGKLERYKIFIGDVWEWSGKYESSKTLKLKLHTSIHLEHGIKLLLRIVEDLHLDELSGISNVLFELNGEGFPCLKHLYIQNNAEIKYIVDSIGWIVSEQSFPKLETLTLQNLNNLEKICHGQLMVNSFSNLKEIKIKSCDRLRYLISCSMANQLPQLLELEVSECKSMKTILHVERDASVDGGTIEFHQLRSLALQSLPLLDEFYSDELKSPTIVPTCKQLVTYIQRPLFSKKVVFLNLETLKLSSINLKKIWEGNSSATFVQNLTHLTVEDCGALKYLFSTSKVSNFPKLKWLEIRKCHMMEEIMETTSNVVFSEVQFLKLEKIIINDMQNLKTIWHPASSFGELKTLEVKSCPRLANVFPSYMQRKFGNLETLTVSDCDSMEVIFQLDANETFSEEDRTELKSMTLCRLPKLKQIWSREPQGILSFHSLQLVNIQICWELEYIFPFSIAANLHLLEELFLDECGLTFVVERKDGQMEGKPVFVLKSLKSLYLWNLKNLKGFYAGIHNLSCSSLKEIYVFGCYKLRIFKTMSTSEIRYLDDIVYGRPLFSFEEVMPNLEQLTLRNEDASIVLDQLSRQLFSKLKVLRVSRFENEEATFPYWFLQNIQALEMLAVEYSSFNEIFQDEKHECGEGNVESSTQLKELRLRFCSSKCLLRFKLLEKVVVKQCPRMNTFSNGSTSAVKLRKVQIEESDDERYWEVDLNQTIRKMHLEKVAFHGFKLLELSEYPELKELWYDGPYSHGGHHIFANLKSLRVKKCDFLSDVIFSSNLLQVLCNLEELEVTDCASLEALIDVKGVNGKEMQMKEISQLKKFKLSGLPNLKHIWNKETHRIISFKNLLTVDVVDCENLESLFPVSLSKDLVQLQEVDIESSGLVEIFSTEDGLEECRFDFPQLTKLRLWNLTKLKCFYRGRHILDCPSLKNLNIYHCGTLQTFSFGHSVFQQANGMGEDEFPQALFPLEKVCTKLELMTLNGNDMKRIANDNFEESLFDKIVDLRIQCFHETHDDFPIDFLQRFPNLVTLWVRCCSFNSLFPLKGVGHQYIGAPLHIRELILYKMEQLKYIWEEDILSSGHAETLDSLPSSISVKNLTILQMEDCKELVYLLTKSVAKSLLQLKIIYIENCESMVDVVKNDEEAAEEIITFKNLERLTLISLSSLKSFCSGKQTFIFPSLVGLKVKGCPKMNIFSSGVVTAPLLQSVTVEDEREHWKGDLNTTILQLFNGKVIRDS 2016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00004 2016 SUPERFAMILY L domain-like 556 993 - -
Bva02g00004 2016 PRINTS Disease resistance protein signature 262 277 - -
Bva02g00004 2016 PRINTS Disease resistance protein signature 335 349 - -
Bva02g00004 2016 PRINTS Disease resistance protein signature 638 654 - -
Bva02g00004 2016 PRINTS Disease resistance protein signature 438 452 - -
Bva02g00004 2016 PANTHER RPP4C3 1865 2003 - -
Bva02g00004 2016 PANTHER RPP4C3 1622 1728 - -
Bva02g00004 2016 SUPERFAMILY RNI-like 1024 1171 - -
Bva02g00004 2016 Gene3D - 225 403 IPR027417 -
Bva02g00004 2016 Gene3D Ribonuclease Inhibitor 1333 1619 IPR032675 -
Bva02g00004 2016 Gene3D Ribonuclease Inhibitor 1857 2010 IPR032675 -
Bva02g00004 2016 Gene3D Ribonuclease Inhibitor 682 965 IPR032675 -
Bva02g00004 2016 Gene3D - 404 487 IPR042197 -
Bva02g00004 2016 Coils Coil 111 141 - -
Bva02g00004 2016 PANTHER RPP4C3 101 1105 - -
Bva02g00004 2016 PANTHER RPP4C3 1502 1589 - -
Bva02g00004 2016 PANTHER RPP4C3 1124 1218 - -
Bva02g00004 2016 PANTHER RPP4C3 1215 1317 - -
Bva02g00004 2016 SUPERFAMILY RNI-like 1495 1766 - -
Bva02g00004 2016 PANTHER - 1622 1728 - -
Bva02g00004 2016 PANTHER RPP4C3 1436 1494 - -
Bva02g00004 2016 PANTHER - 101 1105 - -
Bva02g00004 2016 PANTHER - 1502 1589 - -
Bva02g00004 2016 PANTHER - 1124 1218 - -
Bva02g00004 2016 PANTHER - 1215 1317 - -
Bva02g00004 2016 SUPERFAMILY L domain-like 1752 1981 - -
Bva02g00004 2016 Gene3D Ribonuclease Inhibitor 577 681 IPR032675 -
Bva02g00004 2016 PANTHER - 1865 2003 - -
Bva02g00004 2016 PANTHER - 1436 1494 - -
Bva02g00004 2016 Coils Coil 1347 1367 - -
Bva02g00004 2016 Gene3D Ribonuclease Inhibitor 1154 1332 IPR032675 -
Bva02g00004 2016 Gene3D Ribonuclease Inhibitor 971 1153 IPR032675 -
Bva02g00004 2016 SUPERFAMILY L domain-like 1115 1313 - -
Bva02g00004 2016 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 230 498 IPR027417 -
Bva02g00004 2016 Gene3D Ribonuclease Inhibitor 1620 1829 IPR032675 -
Bva02g00004 2016 Pfam NB-ARC domain 248 469 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00004 Bva-Chr2 66110 78935 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00004 263 652 WRKY Transcription Factor Family AT5G45050 21.320 3.73e-09 60.5