Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00003 ATGGAATTTGTTTCCATTGTTGTGGACAAATTATTGGAATACACTCTGATTCCAGTTGCACGACAAGTGAACTATGTGATTTCCTACAAAGGTAATGTAGAAGAGCTTAAGGAACAAGCTAAACGACTCTTGGGTGAGAGAGAAGCTTTACAACACCGAGTTAATGCTGCCAcaagaaatggagaagaaatCGCAGGTCCGGTTATTGAGTGGCTACGTAAGGTCAAAGAGAATGCTTCCAAGGCAAAGATCTTGcttgatgaagatgataaaCGCCATAAAAGAAATGCAGAAGAAATCGAAGGTCACGATCTGAAGTGGCCAAGTGATGTTGCTTCCAAGGCAGAGGAGCTGcttgatgaagatgataaaCGCAGCAAAACTGCTTGGTGTTCAAGCAAATCATTCTCAAGCATGTGCTGGAGGCATCAAATTAGTAGAAAGGCAAAAAAGTTGGCACAGGAAATTGCCAATATTAAAGGAGAGAAAGAATTTACTCAGGTTTCTTACCGTGGAGAACTGAACATCACAGAGACATGGTCTTCATCAGCCAAAAACAATGAGGCCTTTGAATCCCGAGTGGCAGCTTTGAGCCAGATTATGGAGGCACTAGCAGATCCTAATCTTAGATTGATTGGAGTGCATGGGTTAGGTGGTGTGGGCAAGACCACTCTAGTCCGTGAGGTTGcaataaaagttaaagaaaagtCACCTGACACAAACGTTGTTTTCGTGGATGTGAAACAGAACCCGAAGATAGAAAAAGTTCAGCAAGATATTGCTGACATGATAGGACTGGAACTGAAACAGCAGTCTCTTCTTGTGAGAGCAACTTCATTACGCCAAAGCTTAGaggaagacaaaaagaaaaatattcttgtGATCTTAGATGATCTCTGGGAAAAGCTTGATTTGAACGAAATAGGCATCACTTTTagaaaagagaacaagaaTTATAAGATACTAATGACCTCTAGAAAGAGAGATGTGTTGTCTAAAATGAATACTCAAAGGAACTTTTGGCTTAAAGAATtgacagaagaagaaagttggGAGTTATTTATGGTGAAAGTTGCCTTAAATGAATCTTCAAAAGGTGAAGAATTGCTCGATATAGCTAGAAAGGTTGTTGGAAAGTGTGGTGGGTTGCCTATTGCCATTGTGACAATTGCTGCTACTCTAAAAGGAAAGGAGGAGATAGCAGAGTGGAGGAATGTGTGGCAACGAGTGCAGAATCATCATTATGATGAGATAAATAGACCAATTGTAGTgagttatgaaaatttaaaagatgattGCCTTCGATCAATATTCGTGCTTGCTGGTGTGATTAATTCTTCTGCCaccattgatttatttaagtaCTGTCGTGGCCTGGGTTTATTCTATGACATCGATAATCTTGATGCTCGTATCAGTGAACTAAAAGATTCATGCCTATTACAAGATAATAACTCTTCCAAGAGCCATTTTTCAATGCATGATGTTGTCCGTGACACTGCCATATCAATAGCATCTAAGGATGaccaatttttcttaaaaaaaattgagaacgCTGATCAAGATGAATGGATATCAGTTGATAAGCTGAAAAGTTGCAGAAAAATGCTTTTAGATTTCAGCAACGTTAGAGAACTTCCAGAGGGACTACAATGCTCAAATCTCACTTTTTTCTATCTATGCAGTAAAGATTCTTCTCTGAAATTACCACACAACTTTTTCAAAGGAATGCCTAAACTCGAAGTATTAGTTTTGATCAACATGACCTTTGAGTTTCTGCCTTCCTTTATCAGTGTCTTACGCAATCTGCACACCTTGTGTCTTGATGAATGTGTTTTGGAGAACATAGAAGGAATTGGGGAATTGAAAGGTTTAAAAATTCTGAGTCTTAGTGGCTCTAAGTTTACAAATTTGCCACAAGAAATTGGGAAGCTGACGAAGCTGCAGTTGTTGGACTTGAGCCGTTGCGTCCAGCTTGAATCTATTCCTCCTGGCGTCCTATTAAACTTGCAATTGTTGGAAGTGTTATTAATGGGTAACAGTTTTAGTAAGTGGGCTGTTGGTGATCAACAATCTATGGCTAGTCTTGCTGAGATAAAAGCTTTGAGGAACTTGAACACTTTAGCAGTATATGTTCCTGATCAAAATATGCTTCCCAAGGAACAATTGTTTGAGAGTTTGCACTTGCAAAGATATGAAGTATGCATAGGTGATGAATATTGGTACAGGTTTGGTGAGTCTAAAACTTCAAGGTTCTTGAAACTGGATCTTCATACAGGTATTGACACAAAGCATTACTTCAAAAGTTTGCTAGATCATGTGGGAGATCTGCACGTGGGAAGATTGGCAGATTTGAAGAATGTTGTtccaaatataaacaaaaaaggttTGATAGAATTAAAGCATCTTCTAGTCGATCGAAATCGTGAACTTCAATTCATAGCTGATTTAGTAGAGCATGAGGATATGATCTTTCCAAAATTAGAGTCATTGGATGCCCATGATTCAAATTTGGTAAAGTTATGCAATGGTTTTATCACGGCGAGATCCTTTTCCAAATTGAAGGTTGTTAAAGTGTATTTCTGTACAGAAATGAAGAGGCTATTTTCATTATCTCTTCCAACGTGTCTTCCACATCTTAATGAAATTCAAGTTGACAAGTGCATTAATTTGGAGGGGATAGTTTCTGACGCTGGACTGTTTGCTGGTCCACTTCATTTTGTAGAATTACGCACTGTGACATTAAACTGGCTGCCTTCACTAATTGGCTTTTATTCTGAAGACGAAACATCTTCTAAAGTTCAGCAGAAGAAGACTCAAGTTGGAGATGATAATATTCTTGATCCTCCGGTCACACTGTTCTCTCACAAGGTTTTTATTCCGAATTTGGAGACGTTGAATATCAAGAGTGTatataaattgaagaaattatgGGATCAACAATTTGACAGGTtatcattttgtaatttgaaaactCTGAATGTATGGTGTTGTCATGGGATTTCAAAACTACTCCCATTTAATGTGTTGGAAAACTTGGAAGAGTTGGAAGTGAAATATTGTAATTCCTTAGaagtaatatttgatttggagGGAACAACGATAGAAGAAACACACGATGTTGTCAAGTCATCACATTTGAGGAAATTGAATTTAGATGGACTACCCAAACTGAAACATGTATGGAATAAGgaacccaaaaaaattcttggtTTTCAGTTTTTGTCTACAATAGAAGCTTCGGAATGTGACAgcctcaaatatttatttccagCCTCAGTTGCCAAAGCTCTTCCGAAGCTTCATTTCCTAAGCATAAGAAGATGCTGTGAGCTTCTGACTATTGTtggaagggaagaagaaggagcTGATGTCCCAATTAATTTCGTATTTGCTAGAGTAACTGAATTGCATCTTCAACGGTTACCGAAACTTATGAGCTTTTATCCTGGAACATATTCTACAGAATGGCCactattacaaaaattttattgtaaatctGTTAACAGgagttggaatttttttggGGCTGGACTTCTTGGATTTGAAGAATTCCACTGTCAAAATGGACTTGAAGTGTCAATTCATTTATCTCTTGCTCTTGCCATTCAAAAGtCAATTCCAACGTTAAGAGAGTTAAAATTGGGTTGTAACAAAAATATGATGGCATGGATTCAACGATATTCACCTGATTTTTGTTGGAATGAACTTAAAATTCTCAAACTTAAATTCTTTCATGAGGTGCCTCTATGGACATTTATCAAAACTAAAAGCTTGAGTCGACTCACCACAATGGAGATAATGGaatgtaaaatgataaaagaaatagtggCAGGTAAGGTGACTGATGATGAAATCACGTTCAGCGAATTGAAGAGTTTAACGCTTGACAATTTACCACGGTTGAAAAGCTTTTGCTCATTGAACTGTGTCTTCAATTTCCCAGCTTTGGAAAATGCAGTCATAAAGCGATGCCCCAAGCTGAAGTTATTTTCCAAGCAAGCCCCTATCACAACAAAGCTTCCAAGTGTAAAGGAGGGTTACAGGTTGAGTGCAAAATGCTATTGGGAGGATGACCTTAATTCTACTGTACAAAAGCTGTATACAAATAAGTTATATTATGAGCTAGAGGATTTAAATCTTTCAGAGTATCCAGAGCTAAAGCAAATATGGCATACCCAACTTCCTAATGGAGCATTTTGTAAATTGAAGACTCTAACACTTTCAAACTGTGAATGGTCCTCAAAAGTGCTTCAGTGGAATGTATTGAAGTGCTTAGTCGGATTAAAAGAGCTGAAAGTGGAATCTTGTAAGTCTGTAGAAGTTGTGTTTGATTTGGAAGGAGCCAAAGATGAGGAAAGAGACTATGTATTGGCACTGAGCACATTGACTTTAACTTTCCTACCAAATTTGAAGCATATATGGAACAAAGATCCACAAggaattcttaattttcttaaattaaccAAATTGAAACTTGTGGATGTACCTAAACTAGACCACAGCTTGGTTGAAAAGGCAATCCCCCACTTAGAATTAAGGAGATTGGTAGTAGACAAAGCCATAATGACATGGTTCAGACAATTTCCAGCAGACCACCTTAATTCCCTTGAAGTGCTTGGATTGCAATTCTTATACGATCTCAACACGGGATTTCCATATTCTGTCCTCCAAAAAACGTCCAACTTGAAAACTCTTATCGTTAAAGATGGTTTATTTGAGGAGATATTCCCTTTCAAACAACAGGTTGTTGAGGGAAACCATAGCGCTGTAGTACAACTTAAATGCTTAAGGGTTGAAAATCTCCAAAAATTAAGGCATATATGTGAAGAAGGATATGAATTGGATCCAAGTCTGAAGAATCTTAAAGGATTATACATTAAGAAATGTTCTCGTTTGTTGAACTTAGGGCCTTCATCGCTAACTTTCAATCTTTTGACAGAACTGgcaattaaaaaatgtgagcAGTTGTCATATTTGATGACACCATCAACAGCAAAAAGTTTGGGTGAACTTAAGTATCTGATCATAGAAGAGTGTagtatgataaaagaaataatattaggCAAGGGGGTTGATGCTCAAACAATAGATGAGATCACATTTAGCAGATTGAAAGGTTTAGTGCTTAAAAACTTACCATGTTTGGAAAGCTTTTGCTCAATGAATTATGCCTTCAATTTCCCGTCTTTGGAAGATCTAGTCATATGGCAATGCCCCAACCTGAAGAAGTTTTCCAACGGAGTCTCTAGCACGCCAAATCTAGAACGTATAGTTGGAGACTTGTTTGAGTTTGATCTGAATTCCACTGGACAAGAGACGTATAAATATAAGATTGTTTCTGAAGATGACTTGCTGGTTATGTATGTCTTCTCGGATGTGGACAGCGAGAGCGATGACGAACACCTGAATGAATTAGATCAATTTGAAGTAGAGGAAGAAGACAAAGTGGAAGAACACAAGGAACAtgaagaggagaaagaagagaacatTAATAGGTGCGTAACTGAGCAAAGCACTATAAGCTATTCAGAAAGTAGAGACATAGATTTGCAAGCTTGTACAAATGAAGATATTACTTATAGCACTCCACTTTTGGCAATAAGTCAAGAATACCAAACCTCAGGAAAAGGAGGCAGTCAAAAGAAGATAGAGGACATGAATGTAATTGAGCAGAGTACCACAAGTTATTCAGAAAACGTGGAAGCTCATAAGAAACAGAAGCAAGGGTTCGAAATATCAATCAGCAATTTTGATAGTGAGAAAAGGCTTCAagaacaacatatatattttagagagAGTATGGGAGAGACTACAAATGATGACAAAGGCCTTCTACTGGAGATATTGACAGAGGCAACTTCATCACTTGATTCTATCATTGAAGAACCAATGAGTGAACTGGTTTTGATGGACCGACAAGAAGGACTTGAACAAAATCAAGTTACCATTGAATTTCTTGACAGAACTGATGTGATTCCAGAAGCTGTACATAATGCTATAGAACTCATTGATCGTAGTATTTCTACAGTTTCAACATCAACGGAACTGCAAGGCCTTAGTAGGTGTTCTCCCATTTCCCAACCTTTCTCCTCCATTGCCAATGCAGCAGGTTCCTTAGAGGTAAAACCAATTGAAGTAGTTCAATCAACGCAAGATTCCCAAGAAAGTGACAGCAATGGCAGTAAATCCAATAGCTTCCTTCAAACACAAACGATGACAAGACATGGTGGGGAATTACAATCAAAGGAAGTCCATCAAGAACCGAAAAAGCCACATAGTAGTCCAACAAACCAAGGAGAGGAGATACCTAAAAAGGAGCCAAATAGTGAAGTAGTTTTGACAGACCGACAACTTACCCTTGAGGGAAACAAAGCATCAAGGGAATTGCAACCCCTTGCTACAAGTTCTCACCTTTCACCAATTTTTGGTTATCCTCCGTCTAATTCTTATCAGTCTCTCGATTCTGCAGCTGAAACTTCTGGTCCTCCCTTAACATCCAATGCTGCAATACCATCACCACTGGAGGACCTTCTGTCTCGGCTCCATCTTTTCTCATCATATGAGGAGATGTCTTATTTGCGTGATGGATTTTCTCGCTACCCTTGGGCTTTACATCTGCTGGAATCTTGGAGTGATGAGCGTTGGAAGTGGtcctatttcattattttcgcTCGTGTGCTATGTATTTTGCAAACGACAAGAGCAGCGGATCTTTCTGAGACACTAAATGCTGAGCTGAATTCTTCTTTGAACACTTTGGAGAGTGTTGGTTTTAATGCTAATTGGATTGCTGCAATCCGCGGTCACATTTGTTATTGCCAAGATGGTTTAACCAACGTTAATGAGGCTAAGGCATTGAGGGCTAGTAAAGATGTCATTGCAAGTCGGTTCACAGAGTTTGAGTTGGCTATGCGGACTGAGCTTGCAAGAATAGATGCTTTGTTGGCTAAATATGCTCAAAGAGAGGAGTTGGCTCGCAATGTCATAGGACTTCCTTG 7001 0.3607 MEFVSIVVDKLLEYTLIPVARQVNYVISYKGNVEELKEQAKRLLGEREALQHRVNAATRNGEEIAGPVIEWLRKVKENASKAKILLDEDDKRHKRNAEEIEGHDLKWPSDVASKAEELLDEDDKRSKTAWCSSKSFSSMCWRHQISRKAKKLAQEIANIKGEKEFTQVSYRGELNITETWSSSAKNNEAFESRVAALSQIMEALADPNLRLIGVHGLGGVGKTTLVREVAIKVKEKSPDTNVVFVDVKQNPKIEKVQQDIADMIGLELKQQSLLVRATSLRQSLEEDKKKNILVILDDLWEKLDLNEIGITFRKENKNYKILMTSRKRDVLSKMNTQRNFWLKELTEEESWELFMVKVALNESSKGEELLDIARKVVGKCGGLPIAIVTIAATLKGKEEIAEWRNVWQRVQNHHYDEINRPIVVSYENLKDDCLRSIFVLAGVINSSATIDLFKYCRGLGLFYDIDNLDARISELKDSCLLQDNNSSKSHFSMHDVVRDTAISIASKDDQFFLKKIENADQDEWISVDKLKSCRKMLLDFSNVRELPEGLQCSNLTFFYLCSKDSSLKLPHNFFKGMPKLEVLVLINMTFEFLPSFISVLRNLHTLCLDECVLENIEGIGELKGLKILSLSGSKFTNLPQEIGKLTKLQLLDLSRCVQLESIPPGVLLNLQLLEVLLMGNSFSKWAVGDQQSMASLAEIKALRNLNTLAVYVPDQNMLPKEQLFESLHLQRYEVCIGDEYWYRFGESKTSRFLKLDLHTGIDTKHYFKSLLDHVGDLHVGRLADLKNVVPNINKKGLIELKHLLVDRNRELQFIADLVEHEDMIFPKLESLDAHDSNLVKLCNGFITARSFSKLKVVKVYFCTEMKRLFSLSLPTCLPHLNEIQVDKCINLEGIVSDAGLFAGPLHFVELRTVTLNWLPSLIGFYSEDETSSKVQQKKTQVGDDNILDPPVTLFSHKVFIPNLETLNIKSVYKLKKLWDQQFDRLSFCNLKTLNVWCCHGISKLLPFNVLENLEELEVKYCNSLEVIFDLEGTTIEETHDVVKSSHLRKLNLDGLPKLKHVWNKEPKKILGFQFLSTIEASECDSLKYLFPASVAKALPKLHFLSIRRCCELLTIVGREEEGADVPINFVFARVTELHLQRLPKLMSFYPGTYSTEWPLLQKFYCKSVNRSWNFFGAGLLGFEEFHCQNGLEVSIHLSLALAIQKSIPTLRELKLGCNKNMMAWIQRYSPDFCWNELKILKLKFFHEVPLWTFIKTKSLSRLTTMEIMECKMIKEIVAGKVTDDEITFSELKSLTLDNLPRLKSFCSLNCVFNFPALENAVIKRCPKLKLFSKQAPITTKLPSVKEGYRLSAKCYWEDDLNSTVQKLYTNKLYYELEDLNLSEYPELKQIWHTQLPNGAFCKLKTLTLSNCEWSSKVLQWNVLKCLVGLKELKVESCKSVEVVFDLEGAKDEERDYVLALSTLTLTFLPNLKHIWNKDPQGILNFLKLTKLKLVDVPKLDHSLVEKAIPHLELRRLVVDKAIMTWFRQFPADHLNSLEVLGLQFLYDLNTGFPYSVLQKTSNLKTLIVKDGLFEEIFPFKQQVVEGNHSAVVQLKCLRVENLQKLRHICEEGYELDPSLKNLKGLYIKKCSRLLNLGPSSLTFNLLTELAIKKCEQLSYLMTPSTAKSLGELKYLIIEECSMIKEIILGKGVDAQTIDEITFSRLKGLVLKNLPCLESFCSMNYAFNFPSLEDLVIWQCPNLKKFSNGVSSTPNLERIVGDLFEFDLNSTGQETYKYKIVSEDDLLVMYVFSDVDSESDDEHLNELDQFEVEEEDKVEEHKEHEEEKEENINRCVTEQSTISYSESRDIDLQACTNEDITYSTPLLAISQEYQTSGKGGSQKKIEDMNVIEQSTTSYSENVEAHKKQKQGFEISISNFDSEKRLQEQHIYFRESMGETTNDDKGLLLEILTEATSSLDSIIEEPMSELVLMDRQEGLEQNQVTIEFLDRTDVIPEAVHNAIELIDRSISTVSTSTELQGLSRCSPISQPFSSIANAAGSLEVKPIEVVQSTQDSQESDSNGSKSNSFLQTQTMTRHGGELQSKEVHQEPKKPHSSPTNQGEEIPKKEPNSEVVLTDRQLTLEGNKASRELQPLATSSHLSPIFGYPPSNSYQSLDSAAETSGPPLTSNAAIPSPLEDLLSRLHLFSSYEEMSYLRDGFSRYPWALHLLESWSDERWKWSYFIIFARVLCILQTTRAADLSETLNAELNSSLNTLESVGFNANWIAAIRGHICYCQDGLTNVNEAKALRASKDVIASRFTEFELAMRTELARIDALLAKYAQREELARNVIGLP 2333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00003 2333 PANTHER RPP4C3 1253 1363 - -
Bva02g00003 2333 Gene3D - 344 430 IPR042197 -
Bva02g00003 2333 PANTHER - 1253 1363 - -
Bva02g00003 2333 Coils Coil 142 162 - -
Bva02g00003 2333 Pfam NB-ARC domain 197 425 IPR002182 GO:0043531
Bva02g00003 2333 PRINTS Disease resistance protein signature 211 226 - -
Bva02g00003 2333 PRINTS Disease resistance protein signature 643 659 - -
Bva02g00003 2333 PRINTS Disease resistance protein signature 286 300 - -
Bva02g00003 2333 PRINTS Disease resistance protein signature 380 394 - -
Bva02g00003 2333 PANTHER RPP4C3 1072 1166 - -
Bva02g00003 2333 PANTHER RPP4C3 1634 1768 - -
Bva02g00003 2333 PANTHER RPP4C3 20 1035 - -
Bva02g00003 2333 SUPERFAMILY L domain-like 1372 1757 - -
Bva02g00003 2333 Coils Coil 26 60 - -
Bva02g00003 2333 MobiDBLite consensus disorder prediction 2075 2112 - -
Bva02g00003 2333 SUPERFAMILY RNI-like 958 1252 - -
Bva02g00003 2333 Gene3D Ribonuclease Inhibitor 495 712 IPR032675 -
Bva02g00003 2333 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 439 IPR027417 -
Bva02g00003 2333 CDD AAA 190 325 - -
Bva02g00003 2333 SUPERFAMILY L domain-like 493 918 - -
Bva02g00003 2333 Gene3D - 175 340 IPR027417 -
Bva02g00003 2333 PANTHER - 1072 1166 - -
Bva02g00003 2333 PANTHER - 1634 1768 - -
Bva02g00003 2333 Coils Coil 1806 1837 - -
Bva02g00003 2333 Gene3D Ribonuclease Inhibitor 1533 1760 IPR032675 -
Bva02g00003 2333 Gene3D Ribonuclease Inhibitor 1339 1517 IPR032675 -
Bva02g00003 2333 Gene3D Ribonuclease Inhibitor 945 1116 IPR032675 -
Bva02g00003 2333 Gene3D Ribonuclease Inhibitor 764 944 IPR032675 -
Bva02g00003 2333 PANTHER - 20 1035 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00003 Bva-Chr2 37267 49306 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00003 208 675 WRKY Transcription Factor Family AT5G45050 21.000 6.43e-11 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00003 - - qsu:111984752 667.922