Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01969 ATGCCTCGCAAGGTAAACTACGGacttgattttgatgatgacTATGAAGACTATGATTATGACATTGACATAGAAGAATATGAACAACCTGGTGCAAAGCAAGAAACTTCTGATCCTGGGCTTTGGAGTTGCTCCATTTGCACGTATGATAATGATGACAGTATGACAGCTTGTGATGTTTGTGGGGTTTTGCGTGGTCCTTTGGTTAATAGAGACACTCCCAGCAATAACAAAGCAGTTGAAGGCATATGCAAAAATTCTGGAGTATCCAAATTGGCCAAGTCTCTTTTCGCATCACTGCCAAAGCAGATGCCCAAAGAGGGTTTGTTATTTCAAAAGCATAGTGATGGTTTTCTGATGGATGACAGTAACTTCTACAAGCTTGGGAATGTCCAAGGAGAATTTCATGAGACTTTTAACACTCAAAGCCATTGCCATCTAAATATAGCCCCTTTCAAGTTTGATATTCCATCACCAGATGATGTGGTTTCTAATGGGCTGCATTCTTCCAAAATGGGTTCAAAAGCCCAAGTTATTAACTCAAAAACGTCACGGCTTTCCTCAAACATCATGGAAAAGAATGAACCTGATTTACTATCTAGTTCTGAAAGTTCAGACAAGTCATTGTCCTTAACGCAGAAATCTAGGCTGGATAGTTTAGCAGAGAGCAAGTTTTCGAAGCATATGTCAGTTGATCCAGAAACAAGTAGTAAAACTTCAGAGAGTTTGCAAGTTCCTTTGCAAAAAGGCAAACCTAATAATGTGAATAAAATAAGCTCTTCGAAAATTGGTACTGTTGATGCGATTAGTCACTCTTCTATTAAAGATGGGAAACCTCAAAGCCTTGCAAGCAGTTTCAACCATATGGCTCTTGATGTTAGATCTGGACGGTTAGATGAATCAAATGCTAAAGGACCTCGTCCACATGTACCTTATAGACCAGAAAAATGGATGTTTCCTCAACAATCTGAAGATACATTGACTCAGCTGAATCTTGCTGTTGTTGGCCATGTTGATTCTGGTAAGTCGACTCTCTCGGGTAGACTACTACACCTGTCAGGACGAATATCCCAGAAAGAAATGCACAAGTATGAAAAGGAGGCCAAGTCGCAGGGCAAGGGGTCCTTTGCTTATGCATGGGCATTGGATGAAAGTTCAGAAGAAAGGGACAGGGGAATAACTATGACTGTGGCTGTTGCTTACTTTGACACTAAGAAATATCATGTTGTTGTGCTTGACTCCCCTGGCCATAAAGACTTTGTCCCTAACATGATTTCTGGGGCAACACAAGCTGATGCTGCAATTCTTGTTATAGATGCCTCTGTTGGTGCATTTGAAGCCGGTATGGATGGTAGCAAAGGACAAACAAAGGAGCATGCCCAACTTATCAGAAGTTTTGGTGTTGACCAGGTTTTAGTTGTAGTAAATAAGATGGATGTTGTGGCATACTCCAAGGATCGGTTTGATTTAATTAGGCAACAACTGGGAACATTTCTCCGCTCTTGTGGTTTCAAAGACTCTTCTTTGTCATGGATTCCCTTGAGTGCCatggaaaatcaaaatttggtCACTGCCCCTTCAGACATTCGTCTCAAGTCTTGGTATCATGGATCTTGTCTGTTAGATGCAATTGATTCTTTCCAACCTCCTAGTAGAGAATTCTCAAAGCCTTTACTAATGCCTATATGTGATTTCATCAAATCACCTACAATTGGGCATGTGTCTGTTTGTGGTAAATTGGTAGCGGGAGCTCTTCGGACTGGAACAAAGgtCTTAGTTATGCCTTCAGCTGTCTTGGGTACAGTACGTTCATTGGAGCGTGACTCAAATGGATGTTCTGTTGCAAGAGCTGGTGACAATGTAGCTGTCACGCTGCAAGGTGTAGATGGAAGTCATGTAATGGCAGGAGGTGTGTTATGCCATCCCGACTTTCCTGTTGCGGTTGCAAAACATTTGGAGTTAAAGGTGCTTGTCTTGGATGGTTCAAGCCCCGTATTGGTAGGCTCTCTGTTAGAGTTTCATATACACCATGCGAAAGAGCCGGCTACGGTGTCAAGAATTGTGTCAGTACTTGATTCCAAGACTGGTAAGGTGACAAAAAAATCCCCTCGCTGGCTCACTGCAAAGCAGAGTGCGGTAATTGAGGTAGTTTTGTCTGAGCCAGTCTGTGTGCTGGAGTTCTCTAGTTGCAAAGCTCTTGGACGGGTGTCTCTAAGATCATTAGGAAGAACCATTGCCGTTGGAATCGTAACACGAGTAATTGAAGAACAAGATTA 2276 0.4161 MPRKVNYGLDFDDDYEDYDYDIDIEEYEQPGAKQETSDPGLWSCSICTYDNDDSMTACDVCGVLRGPLVNRDTPSNNKAVEGICKNSGVSKLAKSLFASLPKQMPKEGLLFQKHSDGFLMDDSNFYKLGNVQGEFHETFNTQSHCHLNIAPFKFDIPSPDDVVSNGLHSSKMGSKAQVINSKTSRLSSNIMEKNEPDLLSSSESSDKSLSLTQKSRLDSLAESKFSKHMSVDPETSSKTSESLQVPLQKGKPNNVNKISSSKIGTVDAISHSSIKDGKPQSLASSFNHMALDVRSGRLDESNAKGPRPHVPYRPEKWMFPQQSEDTLTQLNLAVVGHVDSGKSTLSGRLLHLSGRISQKEMHKYEKEAKSQGKGSFAYAWALDESSEERDRGITMTVAVAYFDTKKYHVVVLDSPGHKDFVPNMISGATQADAAILVIDASVGAFEAGMDGSKGQTKEHAQLIRSFGVDQVLVVVNKMDVVAYSKDRFDLIRQQLGTFLRSCGFKDSSLSWIPLSAMENQNLVTAPSDIRLKSWYHGSCLLDAIDSFQPPSREFSKPLLMPICDFIKSPTIGHVSVCGKLVAGALRTGTKVLVMPSAVLGTVRSLERDSNGCSVARAGDNVAVTLQGVDGSHVMAGGVLCHPDFPVAVAKHLELKVLVLDGSSPVLVGSLLEFHIHHAKEPATVSRIVSVLDSKTGKVTKKSPRWLTAKQSAVIEVVLSEPVCVLEFSSCKALGRVSLRSLGRTIAVGIVTRVIEEQD 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01969 758 Gene3D - 31 79 - -
Bva01g01969 758 SUPERFAMILY Translation proteins 549 644 IPR009000 -
Bva01g01969 758 MobiDBLite consensus disorder prediction 165 219 - -
Bva01g01969 758 Gene3D Translation factors 555 644 - -
Bva01g01969 758 PRINTS GTP-binding elongation factor signature 426 437 IPR000795 GO:0003924|GO:0005525
Bva01g01969 758 PRINTS GTP-binding elongation factor signature 331 344 IPR000795 GO:0003924|GO:0005525
Bva01g01969 758 PRINTS GTP-binding elongation factor signature 410 420 IPR000795 GO:0003924|GO:0005525
Bva01g01969 758 PRINTS GTP-binding elongation factor signature 390 398 IPR000795 GO:0003924|GO:0005525
Bva01g01969 758 PRINTS GTP-binding elongation factor signature 471 480 IPR000795 GO:0003924|GO:0005525
Bva01g01969 758 SMART zf_4 40 64 IPR001876 -
Bva01g01969 758 MobiDBLite consensus disorder prediction 232 259 - -
Bva01g01969 758 Gene3D Translation factors 648 758 - -
Bva01g01969 758 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 329 572 IPR027417 -
Bva01g01969 758 Gene3D - 319 551 IPR027417 -
Bva01g01969 758 MobiDBLite consensus disorder prediction 165 259 - -
Bva01g01969 758 PANTHER OS04G0595300 PROTEIN 45 756 - -
Bva01g01969 758 CDD EF1_alpha 331 550 - -
Bva01g01969 758 PANTHER TRANSLATION FACTOR 45 756 - -
Bva01g01969 758 CDD HBS1_C_III 645 753 - -
Bva01g01969 758 Pfam Elongation factor Tu GTP binding domain 330 546 IPR000795 GO:0003924|GO:0005525
Bva01g01969 758 SUPERFAMILY Ran binding protein zinc finger-like 38 65 IPR036443 -
Bva01g01969 758 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 650 754 IPR009001 -
Bva01g01969 758 Pfam Elongation factor Tu C-terminal domain 648 753 IPR004160 -
Bva01g01969 758 ProSitePatterns Zinc finger RanBP2-type signature. 42 61 IPR001876 -
Bva01g01969 758 ProSiteProfiles Zinc finger RanBP2 type profile. 38 67 IPR001876 -
Bva01g01969 758 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 327 552 IPR000795 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01969 Bva-Chr1 19726984 19735665 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01969 40 79 Eukaryotic Initiation Factors Gene Family AT5G10630 52.500 7.03e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01969 K14416 - gmx:100801724 1116.29