Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01961 atgtctttctcattctcttgTCAAGCCTGTCCGAACTCTCAACGGGTTGCTGATCCGAAGCCAGTCTCCGACGCGCAGTGCAGAGGACGATACAGAGGAAAAGCAATGAACGAGGAGTTGGGTTCGAGTGGTTCTGCAACAGCAATCAACTCTTCCAATATAGGCTTTcggCTTTTGAAGAAACAAGGTTGGAAAGAAGGGACTGGTCTTGGAGTCTCTGAGCAGGGTAGATTAGAGCCTGTGGAAACATATGTGAAGAATAATAAACGAGGTTTGGGGGCTGataaagtgaagaaaaaggcTGTGAAACCTCCTATTAGAGATGActccaaagagaaaaatgaacagGAACATTCATCTTCAAAGAAAACCAAGGCAGTTTCTAAACGGATGAGAAAGATGCAGgagatggaaaagaaattgcagGAGAAGGAATTTGAACGTGCCTTCTTTAGGGAGTTTTGGCCAGAAAATGTTTA 479 0.3716 MSFSFSCQACPNSQRVADPKPVSDAQCRGRYRGKAMNEELGSSGSATAINSSNIGFRLLKKQGWKEGTGLGVSEQGRLEPVETYVKNNKRGLGADKVKKKAVKPPIRDDSKEKNEQEHSSSKKTKAVSKRMRKMQEMEKKLQEKEFERAFFREFWPENV 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01961 159 ProSiteProfiles G-patch domain profile. 51 97 IPR000467 GO:0003676
Bva01g01961 159 MobiDBLite consensus disorder prediction 90 139 - -
Bva01g01961 159 SMART G-patch_5 49 95 IPR000467 GO:0003676
Bva01g01961 159 PANTHER BAT4 PROTEIN-RELATED 36 159 IPR039146 -
Bva01g01961 159 Pfam G-patch domain 52 94 IPR000467 GO:0003676
Bva01g01961 159 Coils Coil 127 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01961 Bva-Chr1 19688917 19691543 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01961 38 93 C2H2 Transcription Factor Family AT5G26610 46.429 1.06e-10 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01961 - - cam:101497292 170.629