Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01947 ATGTTTTCGAGCCAAGCTTACAGTAACGGTCACCACCGGCAGCAAGGTGGCAGTGCCACCTCCTCAGAACAGCAACTCGGTATGAGTCACAGACAGCGAGTCCGCCGGGGAAGTCGCCGGTCACGGGATTCAAGAGACACGTACGTTAGCGGTGGTAGCATTAGGGTTTCTGAGCAGGAGCAACAACCTGAGAGACCTCCTTTTACGGACTTCGATATGGCGTATTTCAATTCTTACGCCCACGTTGGCATTCACGAAGAAATGATCAAGGATCGGGTACGAACTGAAACATATAGGGCTGCAATCATGCGACATCAGAATTTCATTGCAGGCAAAGTTGTAATGGATGTTGGATGTGGCACTGGCATCCTTTCTATATTTTGTGCTCAGGCTGGTGCAAAGCGGGTGTATGCAGTTGATGCCAGTGAAATTGCTGTGCAGGCAAATGAAGTTGTCAGAGCAAATAATCTATCTGATGTTGTCATTGTATTGCATGGAAGAGTTGAGGATGTTCAAATTGAAGAAGGGGTCGATGTTATAATTTCAGAATGGATGGGCTATATGCTCCTATACGAGAGCATGCTAGGAAGTGTCATTACTGCCAGAGATCGCTGGCTTAAACCTGGAGGTCTTATTCTTCCCTCAAATGCAACgTTGTACATGGCTCCTGTCACTCATAATGATAGATACAGGGAAAGTATCGATTTCTGGCGCAATGTCTATGGGATTGATATGTCTGCGATGTTACCATTAGCAAAACAATGTGCCTTTGAAGAACCTTCTGTGGAGACAATAGCAGGTGAAAATGTCTTAACGTGGCCACATGTGGTTAAACATGTTGACTGTTATTCAGTTACCATCCAAGAGCTACAATCTGTTACAACTAGGTATAGGTTCAAATCAATGATGCGAGcacCACTGCATGGTTTTGCATTTTGGTTTGATGTTGAATTTAATGGGCCTGCAATATCACAAACCAACCGTCAGCCCTCAGCTTTGATGGCTGACAACCAGGCAGAGGATGGTAGTCAGAGAAAAAAACGGACAAATCCAAATGAAGCATTGGTTCTTTCCACCGCACCTGAGGACCCTCAAACGCACTGGCAACAGacATTGATATACTTTTATGATCCAATAGACCTGGAACAAGATCAAGTCATAGAAGGTTCAGCGACACTATCACAAAGCAGAGAAAATGCTCGATTTATGAATATTCGCCTTGAATATGCTTCAGGTCAAAGATCGTTTGTGAAAGAATGTGTTATGAGATG 1271 0.4406 MFSSQAYSNGHHRQQGGSATSSEQQLGMSHRQRVRRGSRRSRDSRDTYVSGGSIRVSEQEQQPERPPFTDFDMAYFNSYAHVGIHEEMIKDRVRTETYRAAIMRHQNFIAGKVVMDVGCGTGILSIFCAQAGAKRVYAVDASEIAVQANEVVRANNLSDVVIVLHGRVEDVQIEEGVDVIISEWMGYMLLYESMLGSVITARDRWLKPGGLILPSNATLYMAPVTHNDRYRESIDFWRNVYGIDMSAMLPLAKQCAFEEPSVETIAGENVLTWPHVVKHVDCYSVTIQELQSVTTRYRFKSMMRAPLHGFAFWFDVEFNGPAISQTNRQPSALMADNQAEDGSQRKKRTNPNEALVLSTAPEDPQTHWQQTLIYFYDPIDLEQDQVIEGSATLSQSRENARFMNIRLEYASGQRSFVKECVMR 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01947 423 PANTHER BNAC03G41340D PROTEIN 1 420 - -
Bva01g01947 423 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 1 420 IPR025799 GO:0016274|GO:0018216
Bva01g01947 423 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 78 411 IPR029063 -
Bva01g01947 423 Pfam Ribosomal protein L11 methyltransferase (PrmA) 110 184 - -
Bva01g01947 423 MobiDBLite consensus disorder prediction 1 28 - -
Bva01g01947 423 MobiDBLite consensus disorder prediction 327 351 - -
Bva01g01947 423 Gene3D - 216 421 - -
Bva01g01947 423 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 72 406 IPR025799 GO:0016274|GO:0018216
Bva01g01947 423 CDD AdoMet_MTases 114 213 - -
Bva01g01947 423 MobiDBLite consensus disorder prediction 1 68 - -
Bva01g01947 423 Gene3D Vaccinia Virus protein VP39 69 214 IPR029063 -
Bva01g01947 423 MobiDBLite consensus disorder prediction 47 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01947 Bva-Chr1 19594756 19605221 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01947 75 390 C2H2 Transcription Factor Family AT3G12270 39.577 4.21e-67 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01947 K11437 - zju:107421966 663.299