Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01933 ATGAAGGTGGATGAAGAGGATAGTAGCTCTCTGTGGAGCAGAGAGCAGGATAAAGCATTTGAAAATGCCCTTGCAACTCATCCTGAGGATGCTTCAGATCGATGGGAGAAGATTGCGGCTGATGTACCAGGGAAAACTTTAGAAGAGATTAAACAACACTATGAACTCTTGGTTGATGATGTTAAACAGATCGAATCTGGTTGTATCCCTTTGCCATCTTATAATTCTTCTTCAGAGGGTTCAACTAGCCATGCCAGTGATGAAGGAGGTAGCAAAAAGGGTGGCCATCCTGGGCAATATAACAGCGACTCTAATCATGGAACTAAAGCTTCAAGATCAGATCAGGAACGGCGAAAGGGTATTGCTTGGACGGAGGATGAACACAGGTTATTTCTTCTTGGCTTGGATAAGTATGGGAAAGGAGATTGGCGAAGTATATCAAGGAACTTTGTAGTGACAAGAACACCTACCCAAGTAGCAAGCCATGCCCAGAAATACTTCATTCGTTTAAACTCGATGAATAAAGATAGAAGGCGATCCAGCATACATGATATCACCAGTGTAACCAATGGAGAAATTTCAGCAGCTCAAGGACCAATTACTGGTCAGTCGAACAGCTCCTCTGCTGGAAATGGAAATTCTGCGGCAAAATCAGGAAAACCAGCGCCTCAAACCGCGGTAGCGGCACCTGGAGTTGGAATATATGCTGCTCCAAGTATTGGACAACCTATAGGAGGGCCTCTTGTATCTGCAGTAGGCACTCCTGTAAATCTTCCTGTACCTCCACACATGGCATATGGTGTTCGAGCACCGGTTGCCGGTGGAATTGTTCCTGGTGCACCAGTGAATATGGGTCCTATGCAGTACCCTATGCCTCACACAACTGCTCATCGATG 896 0.4565 MKVDEEDSSSLWSREQDKAFENALATHPEDASDRWEKIAADVPGKTLEEIKQHYELLVDDVKQIESGCIPLPSYNSSSEGSTSHASDEGGSKKGGHPGQYNSDSNHGTKASRSDQERRKGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSVTNGEISAAQGPITGQSNSSSAGNGNSAAKSGKPAPQTAVAAPGVGIYAAPSIGQPIGGPLVSAVGTPVNLPVPPHMAYGVRAPVAGGIVPGAPVNMGPMQYPMPHTTAHR 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01933 298 MobiDBLite consensus disorder prediction 193 224 - -
Bva01g01933 298 PANTHER TRANSCRIPTION FACTOR KUA1 7 287 - -
Bva01g01933 298 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 119 169 IPR006447 GO:0003677
Bva01g01933 298 ProSiteProfiles Myb-like domain profile. 115 167 IPR001005 -
Bva01g01933 298 Pfam Myb-like DNA-binding domain 122 167 IPR001005 -
Bva01g01933 298 Pfam Myb-like DNA-binding domain 12 54 IPR001005 -
Bva01g01933 298 MobiDBLite consensus disorder prediction 69 88 - -
Bva01g01933 298 MobiDBLite consensus disorder prediction 1 37 - -
Bva01g01933 298 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 114 171 IPR017930 -
Bva01g01933 298 SMART sant 119 169 IPR001005 -
Bva01g01933 298 SMART sant 8 60 IPR001005 -
Bva01g01933 298 CDD SANT 12 58 IPR001005 -
Bva01g01933 298 SUPERFAMILY Homeodomain-like 10 66 IPR009057 -
Bva01g01933 298 CDD SANT 122 167 IPR001005 -
Bva01g01933 298 MobiDBLite consensus disorder prediction 193 220 - -
Bva01g01933 298 ProSiteProfiles Myb-like domain profile. 4 58 IPR001005 -
Bva01g01933 298 SUPERFAMILY Homeodomain-like 117 172 IPR009057 -
Bva01g01933 298 Gene3D - 121 173 - -
Bva01g01933 298 Gene3D - 10 57 - -
Bva01g01933 298 ProSiteProfiles SANT domain profile. 123 171 IPR017884 -
Bva01g01933 298 MobiDBLite consensus disorder prediction 68 120 - -
Bva01g01933 298 PANTHER HOMEODOMAIN-LIKE TRANSCRIPTIONAL REGULATOR-RELATED 7 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01933 Bva-Chr1 19511232 19518838 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva01g01933 Myb_DNA-binding 7e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01933 - - gmx:100779792 506.523