Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01929 ATGAAGAAGTCGTGACAAGACATTTATGTAAGAGTAGCTGCTTCAGAGTTAGGTCATATACGCAATAGCAGTCATTTTAACAAGAAGAGGCTTGCAGTGATTGTGGTAGGATCTTCTATACCTATCATAGGTATAATGGCAGCTGGATTCATCTTATGGGCACGGAGGAGGAAACTTGAGAAGCTAGGTATTCTTGAACCTATTTATGAGAAGGATAAGAAGGAAAAGCAGGACATCAACTTACCAGAATTTGATATGTCAATCATTGCTAATGCCACTAATCAGTTCTCTGCCAGTAACAAATTAGGAGAAGGTGGATTTGGACCAGTTTATAAGGGTATGTTGGATAATGGGCAAGAAATTGCTgccaaaacaagaaaagtggTCGGAACTTATGGTTATATGCCTCCGGAGTATGCAATGCATGGTTCTTTTTCAGTGAAGTCTGACGTCTTCAGCTTTGGTGTCATTATACTAGAGATAGTTAGTGGGAGAAAAATTATCGATTTTTCTATGCAAAAGGATCATAGTATTAACCTTCTTGCATTTGCATGGGAACTGTGGAAAGAAGGAAAGCCATTGGAGTTATTATATTCTTCAGAAGATGTGTTCTCAAAGGAAACTGTTTCATCTTGTTTGAGCTG 644 0.3727 MKKSQDIYVRVAASELGHIRNSSHFNKKRLAVIVVGSSIPIIGIMAAGFILWARRRKLEKLGILEPIYEKDKKEKQDINLPEFDMSIIANATNQFSASNKLGEGGFGPVYKGMLDNGQEIAAKTRKVVGTYGYMPPEYAMHGSFSVKSDVFSFGVIILEIVSGRKIIDFSMQKDHSINLLAFAWELWKEGKPLELLYSSEDVFSKETVSSCLS 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01929 213 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 2 123 - -
Bva01g01929 213 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 122 205 - -
Bva01g01929 213 ProSiteProfiles Protein kinase domain profile. 1 213 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g01929 213 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 2 123 - -
Bva01g01929 213 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 122 205 - -
Bva01g01929 213 Pfam Protein tyrosine and serine/threonine kinase 126 165 IPR001245 GO:0004672|GO:0006468
Bva01g01929 213 SUPERFAMILY Protein kinase-like (PK-like) 78 125 IPR011009 -
Bva01g01929 213 SUPERFAMILY Protein kinase-like (PK-like) 124 189 IPR011009 -
Bva01g01929 213 Gene3D Transferase(Phosphotransferase) domain 1 126 191 - -
Bva01g01929 213 Gene3D Phosphorylase Kinase; domain 1 51 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01929 Bva-Chr1 19490181 19493521 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01929 119 212 Receptor kinase-like Gene Family AT3G45860 50.000 5.14e-26 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bva01g01929 PK_Tyr_Ser-Thr 2.6e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01929 - - fve:105350824 123.635