Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01927 atggaAATCAACATGGTAACACTTGTGTGCTTTCTCCAATTTTTCTCCTTCGTACCCATTTTCAGTGCCTTGGACAGCATCACTCCAAATCAGCCCCTCCATTACAATGAAACCCTCATTTCAAAAGCTGGATCCTTTGAAGCTGGATTCTTTAGTTTCGATAATTCACAAAGGCAGTACTTTGGTATTTGGTTCAATAGAATATCGCCAAGGATTTTTGTATGGGTAGCCAATAGGGATACTCCTATAGAAAATTCTTCAGGAGTTTTTAGAATCGCCGAAAAGGgaaatctttttattcttgatgGCAAAGGGGCTATAATCTGGTCCACCAATTCATCAGATACTGTACAAAACCCAGTCGTGCAGCTTCTTGACTCAGCCAATCTAGTTGTGAAAGATAGAAATAACTCAAACCCAGATGGAGATAGCGTTTTGTGGCAGAGTTTTGATTATCCTGGTGATACTTTCCTTCCAGGAATGAAACTTAAGAGCAATTTAGTAACAGGTGAATATAGGGCTCTGACATCGTGGAGAAGCTCAGAAGATCCTGCTCCTGGTGGATTTTCATTGCATATAGACACTCATGGACTCCCCCAAGAAATTATTACAAAGGGAAAGATTATTACTTCTAGAATAGGTCCATGGAATGGTATTCATTTCGTTGGTGTTCCTTGGGGGAAGAGGCagcaatttttgaatttttcttttgtgttgaCTGAGCAAGAAGTCTCTTATGAATATGGACTCTTGAACAGTTCAACTGTTACAAGATACTTTATCACTCCAACAGGTCTTGTGCAACGTTTCTTTTGGTCAGATCAGACCCAAAGGTGGGATCTTTATGCTGTTGGTCCTGCAGACCAGTGCGAAACTTATGCCATTTGTGGTGCAAATGCTAATTGTGACGTCAATACTTCTCCTTTGTGCGAATGCTTGAAAGGGTTCACACCCAAATTTCAGGAGAAATGGAGTCCTGATAATTGGTCTGATGGATGCATTCGGAGAATAAATCTGGGATGTGATAATGGAGATGGTTTTATGAAGTATGAAGGGATCAAATTGCCAGACACATCTTCGTCGTGGTTTAACAAGAGCATAAACCTTGAGGAATGCAAGAAATTGTGTTCCAGAAATTGCTCATGCACAGCATATGCAAATTTAGATATCAGAAATGGTGGAAGTGGGTGCTTGCTTTGGTTTGGTGACATTGTGGACATGAGAATACATGCCACTGCAGGTCAAGACATTTACATAAGAGTGGCTGCTTCAGAGCTAGGTGATACCAGCAATAGCAGGCATTTTAATGGGAAGAGGCTTGCAGTGATTCTGGTAGGATCTTCTATATCCATCATAGGTATAATGGTAATTGGTTTCATCATAAGGGCATGGAGTAAGAAACTTGAGAAGCCAGGTAttcttaaacttatttttgggAAGGATAAGAAGGAGAAGCAAGACATCAATTTACCTGCATTTGATTTGTCAATCATTGCTAATGCCACTAATCAGTTCTCTGCCACTAACATAATAGGAGAAGGTGGATTTGGACCAGTTTACAAGGGTGTGATGGATAACGGGCAAGAAATTGCTGTCAAGCGGCTTTCCCAGCATTCTCGACAAGGACCAGAGGAGTTCAAAAATGAGGCTATGTTGATTGCAAATCTTCAGCATAGAAATCTTGTGAAACTTATTGGTTTTTCCATTAAAGATGATGAGAGACTCTTGATCTATGAGTACATGCCCAATAGAAGCTTGGACTGCTTTATTTTCGATCAAGATAGAACTAAGTTCTTGAATTGGGATCAACGCTTCCAAATTATTTGTGGGATTGCTCGGGGACTTCTCTATCTTCACCAAGATTCTAGATTAAGGATTATTCATAGAGATCTTAAAACAAGTAATATTCTTCTTGACAAAAATATGAATCCTaaaatatcagattttggTTTAGCTAGGATTATTGGGAGAGATGAAGCTCAGAcgaaaaccaaaaaagtggTTGGAACTTATGGTTATATGTCTCCAGAGTACGCAATGCACGGTTCCTTTTCCGTAAAGTCTGATGTCTTCAGCTTTGGTGTTGTTGTACTAGAAATAGTTGGTGGGAGAAGGAATACCGAATTTTCCGTTCCTCATGATCACAATACTAACCTTCTTGCATTTGCATGGGAACTGTGGAATAAAGGGAGGCCACTGGAGCTATTATATGCATCAGAAGGTGATTCCCTCACTGTAGATGAATTATTAAGATGCATTCAAATTGGGCTCTTATGTGTGCAAGAGAGACCAGAGGATAGACCTGACATGTCCTATGTAATTCTAATGCTGAACGGTGAGAGACAATTGCCCAAGCCAAGGGAACCCCCCTTTCATCCCCACAAGTTTGGTTCTTCAGGCAGTTGTCCACCGAAGTCAATAAATGAGATGTCTTGTACATCACTAGAGGCGAGATA 2456 0.3897 MEINMVTLVCFLQFFSFVPIFSALDSITPNQPLHYNETLISKAGSFEAGFFSFDNSQRQYFGIWFNRISPRIFVWVANRDTPIENSSGVFRIAEKGNLFILDGKGAIIWSTNSSDTVQNPVVQLLDSANLVVKDRNNSNPDGDSVLWQSFDYPGDTFLPGMKLKSNLVTGEYRALTSWRSSEDPAPGGFSLHIDTHGLPQEIITKGKIITSRIGPWNGIHFVGVPWGKRQQFLNFSFVLTEQEVSYEYGLLNSSTVTRYFITPTGLVQRFFWSDQTQRWDLYAVGPADQCETYAICGANANCDVNTSPLCECLKGFTPKFQEKWSPDNWSDGCIRRINLGCDNGDGFMKYEGIKLPDTSSSWFNKSINLEECKKLCSRNCSCTAYANLDIRNGGSGCLLWFGDIVDMRIHATAGQDIYIRVAASELGDTSNSRHFNGKRLAVILVGSSISIIGIMVIGFIIRAWSKKLEKPGILKLIFGKDKKEKQDINLPAFDLSIIANATNQFSATNIIGEGGFGPVYKGVMDNGQEIAVKRLSQHSRQGPEEFKNEAMLIANLQHRNLVKLIGFSIKDDERLLIYEYMPNRSLDCFIFDQDRTKFLNWDQRFQIICGIARGLLYLHQDSRLRIIHRDLKTSNILLDKNMNPKISDFGLARIIGRDEAQTKTKKVVGTYGYMSPEYAMHGSFSVKSDVFSFGVVVLEIVGGRRNTEFSVPHDHNTNLLAFAWELWNKGRPLELLYASEGDSLTVDELLRCIQIGLLCVQERPEDRPDMSYVILMLNGERQLPKPREPPFHPHKFGSSGSCPPKSINEMSCTSLEAR 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01927 818 PIRSF SRK 1 818 IPR024171 GO:0004674
Bva01g01927 818 Gene3D Transferase(Phosphotransferase) domain 1 581 786 - -
Bva01g01927 818 ProSiteProfiles Protein kinase domain profile. 505 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g01927 818 Pfam PAN-like domain 341 407 IPR003609 -
Bva01g01927 818 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 15 818 - -
Bva01g01927 818 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 15 818 - -
Bva01g01927 818 MobiDBLite consensus disorder prediction 784 818 - -
Bva01g01927 818 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 184 IPR036426 -
Bva01g01927 818 SMART serkin_6 505 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g01927 818 ProSitePatterns Serine/Threonine protein kinases active-site signature. 626 638 IPR008271 GO:0004672|GO:0006468
Bva01g01927 818 ProSiteProfiles Bulb-type lectin domain profile. 24 145 IPR001480 -
Bva01g01927 818 CDD B_lectin 30 153 IPR001480 -
Bva01g01927 818 Pfam Protein tyrosine and serine/threonine kinase 508 774 IPR001245 GO:0004672|GO:0006468
Bva01g01927 818 Gene3D - 20 150 IPR036426 -
Bva01g01927 818 Gene3D Phosphorylase Kinase; domain 1 479 580 - -
Bva01g01927 818 ProSiteProfiles PAN/Apple domain profile. 341 422 IPR003609 -
Bva01g01927 818 CDD PAN_AP_plant 338 422 - -
Bva01g01927 818 Gene3D Hepatocyte Growth Factor 338 417 - -
Bva01g01927 818 Pfam D-mannose binding lectin 73 179 IPR001480 -
Bva01g01927 818 Pfam S-locus glycoprotein domain 212 320 IPR000858 GO:0048544
Bva01g01927 818 CDD STKc_IRAK 511 779 - -
Bva01g01927 818 MobiDBLite consensus disorder prediction 801 818 - -
Bva01g01927 818 SMART blect_4 30 153 IPR001480 -
Bva01g01927 818 SUPERFAMILY Protein kinase-like (PK-like) 490 800 IPR011009 -
Bva01g01927 818 SMART ntp_6 342 421 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01927 Bva-Chr1 19479746 19482948 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01927 430 801 Receptor kinase-like Gene Family AT4G23190 48.168 6.25e-117 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bva01g01927 PK_Tyr_Ser-Thr 5.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01927 - - ccaj:109805721 1003.43