Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01915 ATGGCTCTATCTGGTGGTCACAAAGATAGAGGGGAGTTGAGGATTCATGAGAGTTTGGATGAGCTAAAGACAGATTTGGCAGACTATATTGCTGAAATATCAGAGGCGTCTGTGAAGGAGCGGGGAGTCTTTGCCATTGTTTTATCTGGTGGTTCTCTCATTGGATTAATGGGAAAACTCTCTGAAGCTCCTTACAACAAGACAGTAGACTGGTCCAAATGGTATATCTTCTGGGCTGATGAACGTGTTGTGGCAAAAAACCATGCTGACAGCAACTTTAAGCTCGCAAAAGATAGCCTTTTGTCCAAGGTACCTATTGTCCCCAGTCATGTACATTCTATAAATGATACTGTGTCAGCAGAGGAGGCTGCTGATGACTATGAGTTTGCCATCCGGCAACTGGTGAAAACCCGGGTGGTCAGTGTATCCGAGATCAGTGACTGCCCAAAGTTCGATCTCATACTTCTTGGATTAGGTCCTGATGGCCATGTTGCCTCTTTATTTCCTGATCACTCAGCACTCGATGAGAAGGAAGAATGGGTAACTTTCATTACTGATTCCCCTAAACCGCCACCGGAGAGGATCACATTCACCTTGCCCGTCATCAATTCTGCATCCAATGTGGCTGTGGTTGTGACAGGGGACAGCAAGGCCGAGGCTGTGCACTTGGCAATAGATGATGTTGCACCGGAGTGCCCATTAATCCCGGCAAGGATGGTTCAGCCGGCAAAGGGGAAGTTGGCGTGGTTTTTGGATAAGCCGGCTGCCTCAAAGCTTGAAGCTTTGAATTCGTCTCAGTA 800 0.4738 MALSGGHKDRGELRIHESLDELKTDLADYIAEISEASVKERGVFAIVLSGGSLIGLMGKLSEAPYNKTVDWSKWYIFWADERVVAKNHADSNFKLAKDSLLSKVPIVPSHVHSINDTVSAEEAADDYEFAIRQLVKTRVVSVSEISDCPKFDLILLGLGPDGHVASLFPDHSALDEKEEWVTFITDSPKPPPERITFTLPVINSASNVAVVVTGDSKAEAVHLAIDDVAPECPLIPARMVQPAKGKLAWFLDKPAASKLEALNSSQ 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01915 266 Pfam Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 19 249 IPR006148 GO:0005975
Bva01g01915 266 SUPERFAMILY NagB/RpiA/CoA transferase-like 13 260 IPR037171 -
Bva01g01915 266 Coils Coil 19 39 - -
Bva01g01915 266 Gene3D - 9 261 - -
Bva01g01915 266 PANTHER 6-PHOSPHOGLUCONOLACTONASE-RELATED 1 263 - -
Bva01g01915 266 TIGRFAM pgl: 6-phosphogluconolactonase 15 259 IPR005900 GO:0005975|GO:0006098|GO:0017057
Bva01g01915 266 CDD 6PGL 20 251 IPR005900 GO:0005975|GO:0006098|GO:0017057
Bva01g01915 266 PANTHER 6-PHOSPHOGLUCONOLACTONASE 1 263 IPR039104 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01915 Bva-Chr1 19414548 19418791 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01915 K01057 - pvy:116132899 455.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01915 01 19414548 19418791 Bva01g01915 01 19414548 19418791 ECH