Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01909 ATGCCTAGCTCGAGGCAATTCCTCtacatttcttcttcttcttcttcttcttcttcttcttcttcttcttcttattgcTCTTCATTGTTTTGTACCATTCTCCTCCTCACCACTCTATTCAATGGCCTTGTCTTCTCTGCCAACCATGaagcttctcttctcttctcttggcTTCACAGTTCTGCTTCACCACCCCCTTCATCTTTTTCTAACTGGAACATCCTTGACACCAATCCATGCAATTGGACCTGCATAACATGCTCCCCACAAGGCTTTGTCACTGAAATCAATATACAGTCCACCCCTCTTGAGCTTCCTTTGCCTTCTAATCTTCCTTCTTTTCGTTATCTTCATAAACTTGTAATTTCTGATGCTAATCTCACAGGAACTATTCCTGGAAACATTGGTGATTGTTCCAATCTCATGGTCATCGACCTTAGCTCAAACAATCTTGTTGGGTCCATCCCTGCAAGTATTGGTAAGCTCCTAAACTTGGAGAGCTTGATTTTGAACTCTAACCAGCTCACTGGAAAAATACCAGTTGAGCTAAGCAACTGCATTGGCCTAAAATCGCTTCACCTTTTTGATAACCAGCTAAGTGGGACTATCCCATCTGTGCTGGGAAAATTGTCAAAACTTGAGGCCCTCAGAGCAGGAGGGAACAAAGACATTATTGGGAAAATCCCAGATGAGCTTGGAGAATGCAGAAATTTAACTGTATTGGGGTTAGCTGATACGCGAATTTCAGGCTCTCTGCCAGCTTCATTGGGTCAGCTCAGCAAGCTTCAGACATTGTCCATCTACACCACCATGATATCAGGTGAAATTCCACCTGAGTTAGGTAACTGTTCTGAGCTGGTTGATTTGTTTCTATATGAAAATAGCCTATCTGGTTCTATTCCACCTGAACTTGGTAAGCTCCAAAAGTTGCAGCAGTTGTTTTTATGGCAAAATAGTCTAGTTGGGGCTATCCCAGTTGAGATTGGAAATTGCACAAGCTTGATAAAAATTGATCTCTCTTTAAATTCTCTATCTGGTACAATACCTTTGTCTTTGGGGAGTCTTTCAGAACTTGAAGAGTTTATGATTAGTGATAATAATGTTTCTGGTTCAATACCTTCTAGTCTTTCAAACGCTACCAAGCTGCAACAATTGCAGGTTGACACAAATCAGCTCTCAGGTTTGATTCCAGAAGAGCTTGGGCAATTGTCAATGCTGACACTGTTCTTTGGTTGGCAGAACCAACTTGAAGGAAGCATTCCTTCTAGTTTGGCAAACTGTAGTAACTTACAATCACTAGATTTATCTCGCAATGCACTGACTGGCAACATTCCTAGTGGCCTATTCAAGCTTCAAAACCTCACGAAACTGCTTCTGATTGCCAATGATATATCTGGTTCAATACCATCAGAAATAGGCAGTTGCACCTGTCTCATAAGGTTAAGGCTGGGAAGCAATAGGATCACTGGTGAGATTCCTAAGAGCATTGGCAGccttaaaaacttaaactttttagaTCTCTCTAGTAACCGCCTTTCTGGGCAAGTGCCTGATGAGATTGGTGGCTGCACAGAACTGCAAATGATTGACCTAAGCAGTAATAACCTTGAAGGCTCACTGCCTTATTCCTTGTCATCACTATCAGGTCTCCAGGTATTGGATGCATCTTCTAACAAGTTTTCAGGTCAGATACCAGCAAGTTTGGGCCGTCTCGTTTCACTAAGCAAGCTAATCCTGGGAAGAAATTCATTCTCTGGAACAATTCCTGCATCACTAGGCCTGTGTTCAAGTCTCCAAATGCTTGACCTTAGCAGCAATGAGCTCACTGGAAACATCCCAGCAGAGCTAGGCCGTATCGAAACTCTTGAGATTGCTCTTAATCTTAGTTGCAATTCTCTCAATGGTCCAATTCCAGCTCAGATATCTGCTCTTACCAAGCTTTCCCTTTTGGATCTTTCACACAATCAGTTGGAAGGAGATTTGCTTCCACTAGCAGGGCTAGATAATATTGTCTTTCTCAATGTTTCTTACAATAATTTCACTGGCTATCTTCCAGATAATAAGCTCTTTAGGCAGTTACCACCAAAAGATCTAACTGGAAATCAAGGGCTTTGCACTTCAGGTCTGGACTCATGCTTCTTAAGTGATTCTAGCAAGACAAGTATGGCACTGAATGGAAGTGACGCAAGGAAGTCAAAAAGGCTGAAACTAGCAATTGGATTGCTGATAGTCTTAACAGTGCTAATGATGGCTATGGGGATAACTGCTGTAATAAAGGCAAGAAGAAGCATCAAAGATGATGATTCAGAATTAGGGGACTCATGGCCATGGCAATTCATTCCATTCCAGAAGCTGAACTTCTCAGTGGATCAAGTATTGAGATGTTTAGTTGATGGAAATATAATTGGAAAAGGTTGCTCCGGTGTTGTTTATCGCGCTGAAATGGACAATGGTGAGGTCATTGCTGTGAAGAAACTATGGCCAACAACAATGGCTGCAGGGGAGGGATATAAAGATGATAAAAGTGGAGTTCGTGACTCATTCTCAGCTGAGGTGAAAACTCTTGGCTCAATCAGGCATAAGAACATAGTTAGATGCTTGGGTTATTGCTGGAATAGAAACTCAAGATTGCTTATCTTTGATTATATGCCAAATGGGAGTCTTAGCAGTCTACTTCATGAAAGAACTGGAAATTCCCTGGAATGGGAACTGAGGTATAGAATCCTGTTAGGAGCTGCACAAGGCCTTGCATACCTACACCATGACTGTGTCCCTCCTATAGTACACAGAGACATCAAAGCCAATAACATCCTCATTGGTCTTGAATTTGAACCTTACATTGCTGACTTCGGCTTGGCCAAGCTTGTTGATGATGGCGATTTTGGTCGATCCTCTAATACAGTTGCTGGTTCCTATGGATATATAGCTCCAGAATATGGCTATATGATGAAGATCACAGAAAAGAGTGATGTTTATAGCTTTGGTGTGGTGTTATTAGAAGTCTTAACAGGCAAGCAACCGATCGATCCAACAATACCAGATGGTCTACATGTTGTTGATTGGGTGAGACAGAAAAGAGGGGTCGAAGTACTTGACCCCAGTTTATTATCTAGACCAGAATCAGAAATAGAGGAGATGATGCAGGCACTAGGCATAGCCTTGCTATGTGTAAATTCAGCTCCTGATGAAAGGCCAACAATGAGAGACATTGCAGCAATGCTCAAGGAGATCAGAcatgaaagagaagaatatgcAAAACTTGATGTGCTTCTAAAGGGATCCCCAGCAGCAGATGGAAACAAAAGCTGCAGTGCAGTTCAGGCAACATCTTCATCAGTGCTAACAAAGCAAAGCATGTATCCAAGAAGTAATAACACTTCATTCTCTGTATCTTCATTGCTTCATTCATCTTCTACTGGTGCCAACATAGGCATCAAGTG 3440 0.407 MPSSRQFLYISSSSSSSSSSSSSSYCSSLFCTILLLTTLFNGLVFSANHEASLLFSWLHSSASPPPSSFSNWNILDTNPCNWTCITCSPQGFVTEINIQSTPLELPLPSNLPSFRYLHKLVISDANLTGTIPGNIGDCSNLMVIDLSSNNLVGSIPASIGKLLNLESLILNSNQLTGKIPVELSNCIGLKSLHLFDNQLSGTIPSVLGKLSKLEALRAGGNKDIIGKIPDELGECRNLTVLGLADTRISGSLPASLGQLSKLQTLSIYTTMISGEIPPELGNCSELVDLFLYENSLSGSIPPELGKLQKLQQLFLWQNSLVGAIPVEIGNCTSLIKIDLSLNSLSGTIPLSLGSLSELEEFMISDNNVSGSIPSSLSNATKLQQLQVDTNQLSGLIPEELGQLSMLTLFFGWQNQLEGSIPSSLANCSNLQSLDLSRNALTGNIPSGLFKLQNLTKLLLIANDISGSIPSEIGSCTCLIRLRLGSNRITGEIPKSIGSLKNLNFLDLSSNRLSGQVPDEIGGCTELQMIDLSSNNLEGSLPYSLSSLSGLQVLDASSNKFSGQIPASLGRLVSLSKLILGRNSFSGTIPASLGLCSSLQMLDLSSNELTGNIPAELGRIETLEIALNLSCNSLNGPIPAQISALTKLSLLDLSHNQLEGDLLPLAGLDNIVFLNVSYNNFTGYLPDNKLFRQLPPKDLTGNQGLCTSGLDSCFLSDSSKTSMALNGSDARKSKRLKLAIGLLIVLTVLMMAMGITAVIKARRSIKDDDSELGDSWPWQFIPFQKLNFSVDQVLRCLVDGNIIGKGCSGVVYRAEMDNGEVIAVKKLWPTTMAAGEGYKDDKSGVRDSFSAEVKTLGSIRHKNIVRCLGYCWNRNSRLLIFDYMPNGSLSSLLHERTGNSLEWELRYRILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGLAKLVDDGDFGRSSNTVAGSYGYIAPEYGYMMKITEKSDVYSFGVVLLEVLTGKQPIDPTIPDGLHVVDWVRQKRGVEVLDPSLLSRPESEIEEMMQALGIALLCVNSAPDERPTMRDIAAMLKEIRHEREEYAKLDVLLKGSPAADGNKSCSAVQATSSSVLTKQSMYPRSNNTSFSVSSLLHSSSTGANIGIK 1146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01909 1146 SUPERFAMILY L domain-like 451 708 - -
Bva01g01909 1146 ProSiteProfiles Leucine-rich repeat profile. 646 668 IPR001611 GO:0005515
Bva01g01909 1146 Pfam Leucine rich repeat N-terminal domain 48 88 IPR013210 -
Bva01g01909 1146 Gene3D Ribonuclease Inhibitor 251 348 IPR032675 -
Bva01g01909 1146 Gene3D Ribonuclease Inhibitor 349 449 IPR032675 -
Bva01g01909 1146 SMART LRR_typ_2 644 669 IPR003591 -
Bva01g01909 1146 SMART LRR_typ_2 355 379 IPR003591 -
Bva01g01909 1146 SMART LRR_typ_2 571 595 IPR003591 -
Bva01g01909 1146 SMART LRR_typ_2 307 331 IPR003591 -
Bva01g01909 1146 SMART LRR_typ_2 427 451 IPR003591 -
Bva01g01909 1146 SMART LRR_typ_2 499 523 IPR003591 -
Bva01g01909 1146 SMART LRR_typ_2 162 186 IPR003591 -
Bva01g01909 1146 Pfam Protein tyrosine and serine/threonine kinase 799 1073 IPR001245 GO:0004672|GO:0006468
Bva01g01909 1146 Gene3D Transferase(Phosphotransferase) domain 1 883 1092 - -
Bva01g01909 1146 Gene3D Ribonuclease Inhibitor 450 716 IPR032675 -
Bva01g01909 1146 ProSitePatterns Serine/Threonine protein kinases active-site signature. 927 939 IPR008271 GO:0004672|GO:0006468
Bva01g01909 1146 SMART serkin_6 796 1074 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g01909 1146 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 23 1139 - -
Bva01g01909 1146 Gene3D Ribonuclease Inhibitor 165 250 IPR032675 -
Bva01g01909 1146 ProSitePatterns Protein kinases ATP-binding region signature. 802 825 IPR017441 GO:0005524
Bva01g01909 1146 PRINTS Leucine-rich repeat signature 502 515 - -
Bva01g01909 1146 PRINTS Leucine-rich repeat signature 644 657 - -
Bva01g01909 1146 Pfam Leucine rich repeat 116 175 IPR001611 GO:0005515
Bva01g01909 1146 Pfam Leucine rich repeat 480 536 IPR001611 GO:0005515
Bva01g01909 1146 SUPERFAMILY Protein kinase-like (PK-like) 777 1074 IPR011009 -
Bva01g01909 1146 Gene3D Phosphorylase Kinase; domain 1 783 882 - -
Bva01g01909 1146 Gene3D Ribonuclease Inhibitor 50 164 IPR032675 -
Bva01g01909 1146 ProSiteProfiles Protein kinase domain profile. 796 1082 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g01909 1146 PANTHER RECEPTOR-LIKE PROTEIN KINASE 2 23 1139 - -
Bva01g01909 1146 SUPERFAMILY L domain-like 54 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01909 Bva-Chr1 19385884 19389469 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01909 45 1093 Receptor kinase-like Gene Family AT5G56040 49.060 0.0 989
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bva01g01909 PK_Tyr_Ser-Thr 1.8e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01909 - - gmx:100818541 1719.9