Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01907 ATGGGGAAAACGAAAGACACAGAGAAACGAAAACCAGAAGCAGAGGAGAAAATGGATGGTCTCGAAATCATCTCCATTGGTTCTCTCTACAAAGGTCCTTGGGACAAGAAGTACTGGAGCAGCTCTAGGGGAAAAGATCGGTATCCATATCCAGTTGGTTATAAAGCTTGTAGAGCTCATAATGGTACCACATATAATATGGAAATCCAAGAAGGTGTAAATGGGCCAAAATTTGTGATTTCTTATGCTGATGGGCATTCGTGTTCCGGGAAAACTCCAGAAATTGTATGGgaagaatttcaaaaaagaagcTCTCCCCGCATGAAGATTTGGCATGGGAAGAGACTTTCATCTAAGATGGATGGTTTGGAGCTTTTTGGGTTTAAAAATCCGCTTATCCAGAGGTTGCTTCGCGAACTGGTTGCAGATATAAATGGAACAGCAGAACAGAGCTTGGTATCATCAAACTTATGTGATGGGATTTCTAGAATAGGGCATGATGATTGCCGCCCAAATTCAGGCACATCTCCTGATTTACTACTTTTTCCGGGGAAACCACAGGTTACTGGGAAGAGAAGCAGGGGATGTGAAATTAAACGTACAAAGTCACATGGTGGAACTCTCCTGAAAAGATCTCGACCTCTAGAACTCACACATAGAAGCAGgacatcaaaaagaaaaaatgagaggaaTCTTAGTCAGGGAATATCTGTAGCCCACTATGGTTCTGAAAAAGAGATTGAGGTGACTGATCAGACTGGTGCATTAGCAACTTTGAGCTTGATGTCCTCTGAGAAGGAAAGTACCAATCACTTTTCGTCCAAACATGGTTTTCCGTTGAATGACGTCTCTAATGATCCAACTGGGGGAGACGTGCCTCCAAGGAGAACAAGTGAGCTTGTTGACTCTCGTAGTTGTAGATCTACTGAAATTGCTGAAAAGTGTACGGAGGAAGATCCTCTTCGTAGGTCCCAAAATGCAGAGTTGAAAGTGCCTAGTTTATCAATGGCAAGAGAAGACTGCAGATCATTTGCATCAATTTGTAAAAAGTCCAAGGAGTGTTCTGAAATCGATCTTTTTGCTCCTGACACCTTTGATTTAGTCCAAGAAAATACTTATGATTCTGCTCCAAGTTCCCTGGGAAAGAATGCTTACAATCAGGAAGCCCATGAAACTGCCCCTGGAGGTTTAAGTGAAGCTCGTCAAGGAGAAAATTTGCTTTCATCGAATCCGAATCCGAGCCCTGAGAAAAGTGGTTTTGATTCAGTAAGCGAGGATGTGGCAAAGTCAATGATGACGCTTCTACTTCCTCAGGCAATTCCTCTACTGAAGAAttcttcatcaattaagaagTTTAACATTAGCTCTTCAGAGATGTTGCCTTCTGGGGTAACCTCCATGGAAGTAGACAATAAAACTGGAGGTCTTTTGGATGTGCCAGCTTCTGATGTAGTCGTTACTGATGGTGCATGCGtggaaagagaggaaaagatgCATATGCCGAATACAGACTTGAGTTCAATTAACCTTGAACATGCAAGATCTGTTGACAGTTATGAGTACGATGGATATGAGGATCACAAAACTAGCCAACCAATCTTATCTTCTGATACTGCTGAAGCTCGTGGAGCTAGTtcgaagaaagaaatatgctCTCGCAAAAGTCAAGAGCATCTTCCTCGTGCTGTTTTGGCAAAGACGTCATCAATGTGCTATGTTGATACAAAtctaaccaaaaaattttgtcatgaTCCAGATTTGGATTTTAAAGACTGGCCTCAGGATGGTAGTGTATGCATTCCTGAGTCTATGACAGAGCGCTTTTCTCCCATGAAGAAAGTTATTTCTGAAAGCAACAGTGATGCCTGCACAGATTTGGAAGAAAATCCACTGCAAGTTGGATTAGATTCTACGCAAAAGGGCCCCAAGACAGATGATGATTTTAATGGAGATAGTGCTAATGAGCTTACACGTGTAACTGCAGCAGAAGAGAAGGATGAAGTTGTGGTTAAAACAGACAATACTGAAACAATGGTTATACTCCCTGCTCAAGTACCAAACTTGGTATATTCCagaagaaagatcaaatatTCTTCTCCACCAACAGGAAAGTGTTTGCTCTCAGAAACTACCAAATATGACAAGATTGGAGAACACGAAACTAAAGAAACACATACTTCTAAATGCATTTGGCCTCCCTCAGAAAACATTCAGATGATAACTTCTGACGTTAAACAACGTGAACCGGATTCATTAGGTATTAAAACAAGGGATGAAGTTCATTTTGGAGATTTTCAGAGAGAGAATTCTATTACAAGTTCTCAGATTGAACTGAACCCGTCCAAGtcagaaaataaatcaattatttctgCGTCTAAAGATAAGCTTTATGTACACCCTGAGCTTGCAGATTCACATGTAGAAACATCCCAAACCTATAGAGACGAGAAGGGTAAGCGAAGCAGCCTTGTTGAGTTAACATTTCAGAATCCAGACCTTGATTCTTGTGAGGATAACTGTTCTACAAAGGAAGCTCAATTTATTCCGGAACTGAAACCTCTAAAAAACAGGGATCTTAACAATGATCTGGACAACATTGTCAAGCTTGTGGGATGCTACGTTCACCCCATGCCTGTTTCATCCCTTCTTTTAGGCACAAGAGAGAATGAAATCTACCTATGTGTTATATGTGGCCCTTGGGTGGATCAAGAAAGGACTCTGTTTACGTACAAGATAGCGATTAAGGGACCACGTATAGGGTGCCCTTCTTTGGTGTCTTACACGCCAATACTGTTGCCAGATCGTAATTTTACTAGAGAAACCGTTGTGGAAACTTCTGGTTTGCAGCTCACTCCTGATGGACAGTATAATGTCCTACTTGGATGCATAAAAACCCCCAATTGCAGGGAAGGAAAGATTTGTTGTTCTTGCTCAACGTGCACAGCACACTGTTCTGAGAACGCTGTGAAGATTGTCCAAGTAGGACAAGGTTATGTTTCAGTTGTAGCAACATTGGAAACTGTTGAGAACATGCATTGTATATTGGTCTGTGAGCCTAACCAACTTGTTTCTGTTGGTGAGAGTGGGAGATTGCAAGTTTGGATCATGAATTCTTCATGGAGGGAAAAAATCGAGGATTTTATGATACCTGACTATGACTCAATATCCCCTGGCATAGTGGAGTTGAAGAAGGTTCCGAAGTGTGCTAATTTGGTTGTTGGACGCGATTGTTTTGGGGAATTTAGTTTATGGGATATTTCGAAGCGCAATTGTGTTTCAAGCTTCTCAGCCTCAACAAATCCAATTAATCAATTCTTTCCTATCAGTTTGTTTCATTGGCAAACAGAAGATCCAGGTTTCAGCCATGCAAGTCTAGAGGAGCAAGCTGAGAAACTTCTGGAAGCAACCAACCTATGGTTCTCAGAGTACAAAGAGACCAGTTCATTTCTTCCATCAGAGAATGGAGATCTTGCTATGTGGCTTCTTGTCTCGACTGCCTCGGATATTAAATCTCAACATGATTATGTTTCTAGTGATTGCAAAATACAGACAGGAAGTTGGAGGCTTGCTCTATTGGTGAAAAATGCCGTGCTACTAGGAAGTCCATTGGATCCAAGAGCCGCTTCCATTGGTGTATCAGGTGGTCATGGAATCATTGGTACATCTGATGGACTAGTGTACATGTGGGAATTATCTAGAGGATCTAGGCTTGGCACTCTGCACAAGTTCCAAGATGGCGCTGTTACTTTTATTGCTACCGATGATTCAAGCGGAGGTGCCTTGGCAGTAGCTGGTGGTGGTAAACTCTTGGTTTATCTGCAACAGAAAGAACTATA 3836 0.403 MGKTKDTEKRKPEAEEKMDGLEIISIGSLYKGPWDKKYWSSSRGKDRYPYPVGYKACRAHNGTTYNMEIQEGVNGPKFVISYADGHSCSGKTPEIVWEEFQKRSSPRMKIWHGKRLSSKMDGLELFGFKNPLIQRLLRELVADINGTAEQSLVSSNLCDGISRIGHDDCRPNSGTSPDLLLFPGKPQVTGKRSRGCEIKRTKSHGGTLLKRSRPLELTHRSRTSKRKNERNLSQGISVAHYGSEKEIEVTDQTGALATLSLMSSEKESTNHFSSKHGFPLNDVSNDPTGGDVPPRRTSELVDSRSCRSTEIAEKCTEEDPLRRSQNAELKVPSLSMAREDCRSFASICKKSKECSEIDLFAPDTFDLVQENTYDSAPSSLGKNAYNQEAHETAPGGLSEARQGENLLSSNPNPSPEKSGFDSVSEDVAKSMMTLLLPQAIPLLKNSSSIKKFNISSSEMLPSGVTSMEVDNKTGGLLDVPASDVVVTDGACVEREEKMHMPNTDLSSINLEHARSVDSYEYDGYEDHKTSQPILSSDTAEARGASSKKEICSRKSQEHLPRAVLAKTSSMCYVDTNLTKKFCHDPDLDFKDWPQDGSVCIPESMTERFSPMKKVISESNSDACTDLEENPLQVGLDSTQKGPKTDDDFNGDSANELTRVTAAEEKDEVVVKTDNTETMVILPAQVPNLVYSRRKIKYSSPPTGKCLLSETTKYDKIGEHETKETHTSKCIWPPSENIQMITSDVKQREPDSLGIKTRDEVHFGDFQRENSITSSQIELNPSKSENKSIISASKDKLYVHPELADSHVETSQTYRDEKGKRSSLVELTFQNPDLDSCEDNCSTKEAQFIPELKPLKNRDLNNDLDNIVKLVGCYVHPMPVSSLLLGTRENEIYLCVICGPWVDQERTLFTYKIAIKGPRIGCPSLVSYTPILLPDRNFTRETVVETSGLQLTPDGQYNVLLGCIKTPNCREGKICCSCSTCTAHCSENAVKIVQVGQGYVSVVATLETVENMHCILVCEPNQLVSVGESGRLQVWIMNSSWREKIEDFMIPDYDSISPGIVELKKVPKCANLVVGRDCFGEFSLWDISKRNCVSSFSASTNPINQFFPISLFHWQTEDPGFSHASLEEQAEKLLEATNLWFSEYKETSSFLPSENGDLAMWLLVSTASDIKSQHDYVSSDCKIQTGSWRLALLVKNAVLLGSPLDPRAASIGVSGGHGIIGTSDGLVYMWELSRGSRLGTLHKFQDGAVTFIATDDSSGGALAVAGGGKLLVYLQQKEL 1278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01907 1278 MobiDBLite consensus disorder prediction 213 229 - -
Bva01g01907 1278 PANTHER TRANSFORMING GROWTH FACTOR BETA REGULATED GENE 1 1 1267 IPR040092 -
Bva01g01907 1278 MobiDBLite consensus disorder prediction 203 235 - -
Bva01g01907 1278 Gene3D - 17 143 - -
Bva01g01907 1278 Gene3D - 960 1276 IPR015943 GO:0005515
Bva01g01907 1278 ProSiteProfiles FYR domain FYRC motif profile. 73 153 IPR003889 GO:0005634
Bva01g01907 1278 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 964 994 IPR017896 -
Bva01g01907 1278 MobiDBLite consensus disorder prediction 267 303 - -
Bva01g01907 1278 MobiDBLite consensus disorder prediction 267 281 - -
Bva01g01907 1278 MobiDBLite consensus disorder prediction 389 423 - -
Bva01g01907 1278 Pfam F/Y rich C-terminus 75 140 IPR003889 GO:0005634
Bva01g01907 1278 ProSiteProfiles FYR domain FYRN motif profile. 13 72 IPR003888 GO:0005634
Bva01g01907 1278 SUPERFAMILY WD40 repeat-like 962 1272 IPR036322 GO:0005515
Bva01g01907 1278 MobiDBLite consensus disorder prediction 402 419 - -
Bva01g01907 1278 MobiDBLite consensus disorder prediction 527 553 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01907 - - gmx:100802319 1130.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01907 01 19371751 19380565 Bva01g01907 01 19371751 19380565 ECH