Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01906 ATGAACCTCGAAGAGAAAGTCACCATGGACGTCGTTCCTGCAGCCTCTGAGCAGCAGCACCTCTGTTATGTGCGTTGCAATTTTTGTGACACAGTGCTTATGgTTGGCATTCCATGCAAGAGGTTGCTGGATACTGTGACAGTGAAGTGCGGTCACTGCGGTAACCTCTCCTTTCTCAACACCAGGCCTCCATCCCAAAACCAAAGCATTGATCACTCACTCACTCTTCAgCTGCTGGTTAGAAAAGTAGTAAGAAAGTTAAGAGTATTATTTTCAATGGAGCAGGGATTTTACAGTGATTTCAAGAAGGGTCAAGCTTCATCTTCGTCCTCCTCGTCAACATCCAGTGATCAGCCGGTGTCCCCTAGAGCAGCACCTTTTGTTGTAAAACGTAGTTCTCAGAAACCCTTTTG 413 0.46 MNLEEKVTMDVVPAASEQQHLCYVRCNFCDTVLMVGIPCKRLLDTVTVKCGHCGNLSFLNTRPPSQNQSIDHSLTLQLLVRKVVRKLRVLFSMEQGFYSDFKKGQASSSSSSSTSSDQPVSPRAAPFVVKRSSQKPF 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01906 137 PANTHER PROTEIN YABBY 6-RELATED 7 135 IPR006780 GO:0007275
Bva01g01906 137 MobiDBLite consensus disorder prediction 101 121 - -
Bva01g01906 137 MobiDBLite consensus disorder prediction 101 137 - -
Bva01g01906 137 Pfam YABBY protein 17 119 IPR006780 GO:0007275
Bva01g01906 137 PANTHER PROTEIN CRABS CLAW 7 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01906 Bva-Chr1 19366523 19367358 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01906 1 78 C2C2-YABBY Transcription Factor Family AT1G69180 64.103 7.31e-30 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Bva01g01906 YABBY 2.5e-22 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01906 K25796 - gmx:100795791 152.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01906 01 19366523 19367358 Bva01g01906 01 19366523 19367358 ECH