Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01891 ATGCATGACATGATAGGTGGTGCTCCTCAGAGCATAAAGCTCTTCCACCTACTACTTGCTTTTCCTGATAATGCCAGTTATGTTCCCTCAGAAAACATAGTTCTCAGTTGCGGCTCCAATTCATCAGTCTTTCTATCCCATGATGGCAGGAACTGGACTGGTGATGTTGATTCACCTTATGTACCCTTTGATGCAGACGTGAAGTCCCTGATAGCCGTAGCCCCAGTGCCTCCTGTATCGGTTCCTCAAATTCCTTATACGACTGCACGGATCTTTAAGTCCCCCCATTCACCTACAGATTCAATTGCTTCCCTCAACACtgattatttcaaaaaagCATATCTAGTGAAGGAATTCACCATCCATGTAATTGACCGGACATTAGAGCTGACTTTTGCTCCAACATCTAATGCTTCTGATGCCTATGCATTTGTGAATGGAATTGAAATTGTTTCAATGCCCCTTAATCTCTATATTCGCGGAGATAATGCCCCTCTTCGTTTAGCTGGCCGTGACACTGTACTATACATCAATAACAATTGTGCCCTGGAAACCATGTATAGAATCAATGTAGGTGGTGATGATATTCCACCCAAAAATGATACAGGAATGTTTCGCACTTGGACCAGAGACTCGGATTTTCAATTTGGAGCTTCAGGCTTGGATGCTTTTGATATGCAAATGCCAGTATTGTATTCCGCTACTGTCCCAGCCTATATTGCGCCAGCAAGTGTCTATCGCACAGCCCGGACAATGGCCTGGTATGGGAGTaacatcaatttaaattataatctgACGTGGGACTTTCCTGTTGATTCTGGTTTCAACTATCTCATTCGACTTCACTTCTGTGAAGTTGACCGAGAGGTAACCAAGGTGAATCAGCGAAcctttaatatatatcttaataatCAAACAGCTCAGAAAAATGCTGATGTAATTTCCTGGAGTGGTCGGCGTGGTGCTCCTGTATATGAAGACTACGTTGTGATGATTCCGAAATCACCCATAGCAAAGCAGGATCTGTGGCTGGATCTGCACCCAGACGCACAATCAAAAACACAATTCTACAATGTTATCTTGAACGGGGTAGAGATCTTCAAATTGAGCTATACAGATGGAAATCTTGCTGGGATTAACCCCAGCAAAAGTAAGTCTCAGTCAGATGTCCATGTCCAACAAGTTGCATCCCCTAGAAAGCGGAAGAAGATCATATTCATCAGCATTGGATGCGGACTTGGCACATTGGCATTGTCATTACTCCTATGCTTCCTTTTCTATAGGTTTAAAGTGATTAAGAGGAAGAGCATGTcatgtttttgtatttttttacatgCTCCTAGTTTAATGAGAAGGGCAAAGCAGTCATCTTCTCGAATTAATCTTTCAGTAGATGAGATAAGAGACGCAACAAATAACTTCGACGAGGCTCTAATCGTTGGCACAGGTGGATTTGGTAAGGTTTATAAGGGTAGCTTTGATTGTGGGGCCACCTTTGTAGCCATAAAGCGTGGAAATCCAATGTCAGAACAAGGTGCATCAGAATTTCACACTCAGATACAAAATCTCTCTCAGCTTCGCCATCACAACTTGGTTTCTCTTATTGGTTATTGCAAGGAAGAAGGGGAGATGATATTAATCTACGACTTTATGGTCAATGGGACCCTGTTTAACCATCTTCACATGCAGAGGGGAAAGCCCCCTTTGTCATGGATTCAACGTCTTGAGATATGCATCGGAGTTGCAAAGGGTTTACACTACCTGCATACCGGCACAGGGCAGAAGATCATCCACCGAGACATCAAGACAACGAATATACTCTTAGATCATAACTGGGTGGCCAAGATTTCAGACTTTGGGTTGTCAAAGGCAAGCTTTCCTTCCTTAAGTGACACCAACATCAAAGGCACTATTGGATACTTAGACCCAGAGTACTTCAGGTGTCAGAGATTAAGTGAGAAATCTGATGTATACTCATTTGGGGTGGTGTTATTGGAGGTGCTAAGTGCAAGGCCTGCTTTGAGTCCAGTTGAAGATGAAGAGCATGCAAACTTGGCTGACTGGGCTCGATATTGCCATGAGAAGGGAATTGTAGATCAACTGTTGGATCCAAACCTGCAAGGGAAAATAGCAACAGCGTCTTTGGAGATGTATCTGGGGGTGGCCAAGAAATGTTTAGCTGAAAAAGCAGTGATGAGGCCACTTATGGGCGATGTGCTGCAGAACCTTGTACTGGCATTGCAACTTCAGAAAAATGCGGATTTGGCACAAAATAGGGTTGTCCATATAGAAGAGAATACTGGTTCAAATAGAAATTCTGATACGACACCAGGGATTGAGTTCTCTGAGATAATGATGCCTCTTGGACGatg 2372 0.4228 MHDMIGGAPQSIKLFHLLLAFPDNASYVPSENIVLSCGSNSSVFLSHDGRNWTGDVDSPYVPFDADVKSLIAVAPVPPVSVPQIPYTTARIFKSPHSPTDSIASLNTDYFKKAYLVKEFTIHVIDRTLELTFAPTSNASDAYAFVNGIEIVSMPLNLYIRGDNAPLRLAGRDTVLYINNNCALETMYRINVGGDDIPPKNDTGMFRTWTRDSDFQFGASGLDAFDMQMPVLYSATVPAYIAPASVYRTARTMAWYGSNINLNYNLTWDFPVDSGFNYLIRLHFCEVDREVTKVNQRTFNIYLNNQTAQKNADVISWSGRRGAPVYEDYVVMIPKSPIAKQDLWLDLHPDAQSKTQFYNVILNGVEIFKLSYTDGNLAGINPSKSKSQSDVHVQQVASPRKRKKIIFISIGCGLGTLALSLLLCFLFYRFKVIKRKSMSCFCIFLHAPSLMRRAKQSSSRINLSVDEIRDATNNFDEALIVGTGGFGKVYKGSFDCGATFVAIKRGNPMSEQGASEFHTQIQNLSQLRHHNLVSLIGYCKEEGEMILIYDFMVNGTLFNHLHMQRGKPPLSWIQRLEICIGVAKGLHYLHTGTGQKIIHRDIKTTNILLDHNWVAKISDFGLSKASFPSLSDTNIKGTIGYLDPEYFRCQRLSEKSDVYSFGVVLLEVLSARPALSPVEDEEHANLADWARYCHEKGIVDQLLDPNLQGKIATASLEMYLGVAKKCLAEKAVMRPLMGDVLQNLVLALQLQKNADLAQNRVVHIEENTGSNRNSDTTPGIEFSEIMMPLGR 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01891 790 SMART serkin_6 474 745 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g01891 790 SUPERFAMILY Protein kinase-like (PK-like) 464 749 IPR011009 -
Bva01g01891 790 Gene3D - 181 371 - -
Bva01g01891 790 ProSitePatterns Protein kinases ATP-binding region signature. 480 503 IPR017441 GO:0005524
Bva01g01891 790 Gene3D Transferase(Phosphotransferase) domain 1 551 769 - -
Bva01g01891 790 Gene3D Phosphorylase Kinase; domain 1 443 550 - -
Bva01g01891 790 Pfam Malectin-like domain 111 368 IPR024788 -
Bva01g01891 790 PANTHER OS07G0166700 PROTEIN 104 790 IPR045272 GO:0004714|GO:0006468
Bva01g01891 790 PANTHER OS07G0166700 PROTEIN 21 96 IPR045272 GO:0004714|GO:0006468
Bva01g01891 790 CDD STKc_IRAK 480 743 - -
Bva01g01891 790 ProSitePatterns Serine/Threonine protein kinases active-site signature. 596 608 IPR008271 GO:0004672|GO:0006468
Bva01g01891 790 Coils Coil 746 766 - -
Bva01g01891 790 Pfam Protein tyrosine and serine/threonine kinase 480 742 IPR001245 GO:0004672|GO:0006468
Bva01g01891 790 PANTHER FERONIA RECEPTOR-LIKE KINASE 104 790 - -
Bva01g01891 790 PANTHER FERONIA RECEPTOR-LIKE KINASE 21 96 - -
Bva01g01891 790 ProSiteProfiles Protein kinase domain profile. 474 745 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01891 Bva-Chr1 19281925 19284697 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01891 25 754 Receptor kinase-like Gene Family AT3G51550 46.000 0.0 667
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Bva01g01891 PK_Tyr_Ser-Thr 4.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01891 - - gmx:100776859 879.396