Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01883 ATGAAGAAGACACGCATAGTTCCTATTACCTTTTTGATCtacctttctttcttccatccAACAACCTTAACCTCTAGCAATTCAACTGACATTCCTTTGGACAACATCCACCTCAACTGTGGTTCTTCAGGAGCATCATCATTCAATGGAGTAAAATGGATAGGTGATGTAGACTCTAATTTCTTACCTCAgtcatatgataaaaaatcttCAACCCCCTTGGTCTCTAACCTAGACTCTGCATTCCCACCATACTTAAATGCACGCTTAATTCGTTCTTCTTTTACATACTCTTTCCCATTCTCCCCGGGACTCAAATTTGTTAGGTTTTACTTTGTATCAACTTCATATTTGGGTTTAAACCCCTCCAAGGCTTATTTTTCTGTCCAAACTGGTCCTTATACTCTCTTGAATGATTTCAGTCCTTCAGTTGTTGCAGAAGAGCTCAAATCAGTGTACTTCACAGAAGATTTCTTAGTCATTGTTAAGGGAACTAGATTAACCATCACTTTCACGCCATCTCCTGTGATTTCCAGTGCGTTCTCCTTTGTGAATGGCATTGAGGTCTTCTCAGTGCCCCACAGCATATATTTTTCAGGTGCTAATGTTCCTCTTCCATTCCTCGGTCACCAGGCACCGTTCTTTATAAATGATGAGTACGCTCTTGAGATGCTTTACAGTGTCAATGCGGGTGTTGATAGACATACTGATGTTAAAAATGCATTTGGGTCATGGCTGGACGATCTGAGCTACATATCCAGTTCTACAAATGGAAGTGTCCTCAATATTGTAGACAGCCCTTATGACGTGACTTACAGTTCTTCACTCTCAAAATATTCTGATTATGCTGCACCAAAAGAATTATACTGGACAGCCAGGACTATGGGTGGCAATGATGACATCAACAGAAGATACAATTTAACATGGTCCTTCCATGTTGATTCGGGTTTCAAGTACCTTGTCAGGCTTCATTTCTGCGAGATCTCCTCAGATGTAACAGAGGTAAATCAAAGAGTGTTCAAGGTGTATATCAACAACCAAACAGCAGAGGAGAGAATGGATTTAATTGCTTTGACCGGTGCACCATTGGTTGCTTTGTACAGAGACTATGTTGTTATGGTTCCAATGAATAGTGAGAGAAAACAAGATTTGCGGATCGCCCTTCACCCTAACATGGAGTCAAAACCCAAGTATGCTGATGCCATATTGAACGGCATTGAAATTATCAAACTAAGTGATAGCAGTAAGAATCTTGCAGCAAGAATTCAGCTGAAGAGGGaacaaaaagggaagaaaattcCACTTACCATTTTTGGAGCCACTTCTGGTGCCATTTTGGTACTGTTCATTGCATGTTTCATTCTTATCCGCAGAAGTCAGAAGGGGAAGTGGGGCACTTCCTGGACGGTCCCATTAGATTCTGAAGgaaaaagttacaaaattaCGCAATTAGCAATGAACTCAGATCATTGCTATGAATTCACATTTGAAGATATCAGAAGAGCCAGCCACAACTTCAATGAGGCTCTTGTCATTGGTGAAGGAGGCTTTGGCAAGGTTTACAAAGCCTTCATCCATGAGGGAGGCACCCTTGTGGCAATCAAGCGCTGCAATCACCAGTCACGCCAAGGAGTTCGGGAGTTCCAAAATGAGATCAATTTACTCTCCTCATTTCATCACATGAATTTAGTGTCACTCTTGGGCTACTGTCATGAAGAAAATGAGCTGATACTTGTCTATGAATATATGGCTCAGGGCAGTCTTCGTGATCACTTAAAGACGCATAAACAGACTTTGCCTTGGACTCAAAGACTACAAATTTGTATAGGTGCAGCTCGTGGACTGCATTACCTTCATACTAGCAAAAGTCACAAAATCATTCACAGGGATGTCAAGTCAGCTAACATATTACTTGATCACAACTTGGTTgcaaaaatttcagattttgggCTATCCAAAATCGGCCCCAGTTCAACATCCCACAACCATGTTAGCACCGAGGTAAAAGGTACATTCGGGTACTTAGATCCTGAGTACTACAGGAACAGGAAACTGACTGAAAAATCTGATGTTTATTCATTTGGGGTGGTGTTGTTTGAAGTGCTAAGTGGAAGGCCAGCAGTGAATCCTTTTGCAGTGGAAGAAGAAGGTGAGAAGGTTGGGTTGGTTGAGTGGGCATTTCATTGCCATCTTTCTGGGACAATTCATAGACTGGTTGATCCGCATTTAGATGGAAAGATCAACGCAGAATGCCTAATGGCATTTGTGGATATTGGCATCAAGTGCTTGGCGGACAAGAGCATAGATCGGCCAACGATGGGGGAAGTGCTTAGTAATTTGGAGAAAATTCTGTCATTGCAGGAGAGTTGGGATGAGAAGGAAACAGAAACAAATGGTGAACAACCAGTGCATGGCATTGGAGCCAATGAAGAGATCACAACTAACACTGTCGCTGGTGAACatcatttaaatcaaattgtgCATATCGATTG 2492 0.4029 MKKTRIVPITFLIYLSFFHPTTLTSSNSTDIPLDNIHLNCGSSGASSFNGVKWIGDVDSNFLPQSYDKKSSTPLVSNLDSAFPPYLNARLIRSSFTYSFPFSPGLKFVRFYFVSTSYLGLNPSKAYFSVQTGPYTLLNDFSPSVVAEELKSVYFTEDFLVIVKGTRLTITFTPSPVISSAFSFVNGIEVFSVPHSIYFSGANVPLPFLGHQAPFFINDEYALEMLYSVNAGVDRHTDVKNAFGSWLDDLSYISSSTNGSVLNIVDSPYDVTYSSSLSKYSDYAAPKELYWTARTMGGNDDINRRYNLTWSFHVDSGFKYLVRLHFCEISSDVTEVNQRVFKVYINNQTAEERMDLIALTGAPLVALYRDYVVMVPMNSERKQDLRIALHPNMESKPKYADAILNGIEIIKLSDSSKNLAARIQLKREQKGKKIPLTIFGATSGAILVLFIACFILIRRSQKGKWGTSWTVPLDSEGKSYKITQLAMNSDHCYEFTFEDIRRASHNFNEALVIGEGGFGKVYKAFIHEGGTLVAIKRCNHQSRQGVREFQNEINLLSSFHHMNLVSLLGYCHEENELILVYEYMAQGSLRDHLKTHKQTLPWTQRLQICIGAARGLHYLHTSKSHKIIHRDVKSANILLDHNLVAKISDFGLSKIGPSSTSHNHVSTEVKGTFGYLDPEYYRNRKLTEKSDVYSFGVVLFEVLSGRPAVNPFAVEEEGEKVGLVEWAFHCHLSGTIHRLVDPHLDGKINAECLMAFVDIGIKCLADKSIDRPTMGEVLSNLEKILSLQESWDEKETETNGEQPVHGIGANEEITTNTVAGEHHLNQIVHID 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01883 830 Pfam Protein tyrosine and serine/threonine kinase 511 779 IPR001245 GO:0004672|GO:0006468
Bva01g01883 830 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 33 794 - -
Bva01g01883 830 Gene3D - 220 412 - -
Bva01g01883 830 Gene3D - 35 192 - -
Bva01g01883 830 CDD STKc_IRAK 512 783 - -
Bva01g01883 830 ProSitePatterns Protein kinases ATP-binding region signature. 512 535 IPR017441 GO:0005524
Bva01g01883 830 Pfam Malectin-like domain 38 410 IPR024788 -
Bva01g01883 830 ProSiteProfiles Protein kinase domain profile. 506 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g01883 830 ProSitePatterns Serine/Threonine protein kinases active-site signature. 626 638 IPR008271 GO:0004672|GO:0006468
Bva01g01883 830 Gene3D Phosphorylase Kinase; domain 1 491 582 - -
Bva01g01883 830 SMART serkin_6 506 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g01883 830 SUPERFAMILY Protein kinase-like (PK-like) 484 780 IPR011009 -
Bva01g01883 830 Gene3D Transferase(Phosphotransferase) domain 1 583 804 - -
Bva01g01883 830 PANTHER OS07G0166700 PROTEIN 33 794 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01883 Bva-Chr1 19254707 19257199 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01883 32 800 Receptor kinase-like Gene Family AT3G51550 46.601 0.0 671
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Bva01g01883 Malectin_like 4.2e-29 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01883 - - lja:Lj2g3v1226740.1 955.281