Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01881 ATGATACcaaaaatgatgaatttttGCTCATTTTCTATCGTCATCATTCTCTTCTTGCTCCTTCAGCTCTTCCACCTACTACTTGCTTTTGCTGATAATGCCAGGTATGTTCCCTCTGAAAACATAGTTCTCAGTTGCGGCTCCAATTCATCAGGCTTTCTATCCTACGATGGCAGGAACTGGAGTGGCGATGTTGGTTCACCTCATTTACCCTTTGATGCAGACTTCAAGTCCCGGATAGCCACAGCCCCAGTGCCTCTTGCATCCATTCCTCAAGTTCCCTATATGACTGCTCGGATCTTTCAGTCCCAATTCACCTACAGGTTCAACGTGACACCTGGTCCAAAGTTCATTCGCCTTCACTTCTACCCAACTTCTTACTTGGGCCTCAATGTCTCCAAATCTTTCTTATCTGTTACTGCTGGCAACCTCACTTTCCTACATAATTTCAGTGCTTCCCTCAACACTGACTATTTCAACCCAACATATCTAGTGAAGGAATTCATCATCCATGTAAGAGACCGGACATTAGAGCTAACTTTCTCTCCGACATCTAATGCTTCTGATGCCTATGCATTTGTTAATGGAATTGAAATTGTTTCAATGCCCCTTAATCTCTATATTCGCGGTGATAATGCCCCTCTTCCTTTAGCTGGCCACCTTACCGAAGTACTATACATCAACAACAATTGTGCCCTGGAAACCATGCATAGAATCAATGTAGGAGGTGATGATATTCCACCCAAAAATGATACAGGAATGTTTCGCACTTGGACCAGAGACTTGGATTTTCTATTTGGAGCTTCAGGCTTGGATGCTTTTGATATGCAAATGCCAGTTTTGTATTCAGCTACTGTTCCGGCATATACTGCACCAGCAAGTGTCTATCAAACAGCCCGGTCAATGATCGTGAATTGGACTACCCTCAATCTAAATTATAATCTGACATGGTTATTTCCCGTTGATTCTGGTTTCAACTATCTCATTAGGCTTCACTTCTGTGAAGTTGACCGAGAGATAACCAAGGTAAATCAGCGAAcctttaatatatatcttaataatCAAACAGCCCAGGAAGGAGCTGATGTAATTGCCTGGGGTGGTCGGCGGAGTGCTCCTGTGTATGAAGACTACGTTGTGATGATTCCAGAATCAAGCATGGGAAAGCAGGATATGTGGCTGGATCTGCACCCAGATGTCGAAGCAAAACCAGAATACTATAATGTTATCTTGAACGGGGTAGAGATCTTCAAATTGAGCTATACAGATGGAAATCTTGCTGGGATTAACCCTCGCGAAAGTAAGTTTCAGTCAAATGTGCACGCCCAACAAATTGCGTCCCCTGGAAAGCCCAAGAAGATCGTATTTATCAGCATCGGATGTGGATTTGGCGCAGTGGCATTATCATTACTTCTATGCTTGCTTTTCTATAggtttaaattgattaagaggAGAAGCATGTcatgtttttgtatttttttacatgCTCCTAGTTTAATGAGAAGGGAAAAGCAGTCATCTTCTCAAATTAATCTTTCAGTAGATGAGATAAGAGACGCAACAAATAACTTCGACGAGGCTCTAATCGTTGGCACAGGTGGATTTGGTAAGGTTTATAAGGGTAGCTTTGATGGTGGGGCTACCTTTGTAGCCATAAAGCGTGGAAATCCAATGTCAGAACAAGGTGCATCAGAATTTCAAACTGAGATACAAAATCTCTCTCAGCTTCGCCATCACAACTTGGTTTCTCTTATTGGTTATTGCAAGGAAGAAGGGGAGATGATATTAATCTACGACTTTATGGTCAATGGGACCCTGTTTGACCATCTTCATATGCAGGGGGGAAAATCCCCTTTGTCATGGATTCAACGTCTTGAGATATGCATCGGAGTTGCAAAGGGTTTACACTACCTGCATACCGGCACAGGGCAGAAGATCATCCACCGAGACATCAAGACAACGAATATACTGCTAGATCATAACTGGGTGGCCAAGATTTCAGACTTTGGATTGTCAAAGGCAAGCTTCCCTTCCTTAAGTAACACCAACGTCAAAGGCACTATTGGATACTTAGACCCAGAGTATTTTAGGTGTCAGAGATTGAGTGAGAAATCTGATGTATACTCTTTTGGGGTTGTGTTATTGGAGGTGCTAAGTGCAAGGCCTGCCTTAAGTCCAGTTGAAGATGAAGAGCATGCAAACTTGGCTGACTGGGCTCGATATTGCTTTGAGAAGAGCATTATAGATCAATTGCTGGATCCAAAACTGCAAGGGAAAATAGTAACAGAGTCTTTGGATATATATCTGGGGGTGGCCAAGAAATGTTTGGCTGAAAAAGCAATGATGAGGCCACTTATGGGCGAAGTGCTGCAGGATCTTGCACTGGCGTTGCAACTTCAGAAGAATGCGGATTCGGCGCAAAATAGGGTTGTCCACATAGAAGAGAATACcagttcaaataataattctgaTATGACACCAGGGATTGAGTTCTCTGAGATCATGATGCCTCTTGGCCGATG 2522 0.4179 MIPKMMNFCSFSIVIILFLLLQLFHLLLAFADNARYVPSENIVLSCGSNSSGFLSYDGRNWSGDVGSPHLPFDADFKSRIATAPVPLASIPQVPYMTARIFQSQFTYRFNVTPGPKFIRLHFYPTSYLGLNVSKSFLSVTAGNLTFLHNFSASLNTDYFNPTYLVKEFIIHVRDRTLELTFSPTSNASDAYAFVNGIEIVSMPLNLYIRGDNAPLPLAGHLTEVLYINNNCALETMHRINVGGDDIPPKNDTGMFRTWTRDLDFLFGASGLDAFDMQMPVLYSATVPAYTAPASVYQTARSMIVNWTTLNLNYNLTWLFPVDSGFNYLIRLHFCEVDREITKVNQRTFNIYLNNQTAQEGADVIAWGGRRSAPVYEDYVVMIPESSMGKQDMWLDLHPDVEAKPEYYNVILNGVEIFKLSYTDGNLAGINPRESKFQSNVHAQQIASPGKPKKIVFISIGCGFGAVALSLLLCLLFYRFKLIKRRSMSCFCIFLHAPSLMRREKQSSSQINLSVDEIRDATNNFDEALIVGTGGFGKVYKGSFDGGATFVAIKRGNPMSEQGASEFQTEIQNLSQLRHHNLVSLIGYCKEEGEMILIYDFMVNGTLFDHLHMQGGKSPLSWIQRLEICIGVAKGLHYLHTGTGQKIIHRDIKTTNILLDHNWVAKISDFGLSKASFPSLSNTNVKGTIGYLDPEYFRCQRLSEKSDVYSFGVVLLEVLSARPALSPVEDEEHANLADWARYCFEKSIIDQLLDPKLQGKIVTESLDIYLGVAKKCLAEKAMMRPLMGEVLQDLALALQLQKNADSAQNRVVHIEENTSSNNNSDMTPGIEFSEIMMPLGR 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01881 840 Gene3D - 42 203 - -
Bva01g01881 840 Gene3D - 231 420 - -
Bva01g01881 840 Coils Coil 796 816 - -
Bva01g01881 840 Gene3D Phosphorylase Kinase; domain 1 492 600 - -
Bva01g01881 840 PANTHER FERONIA RECEPTOR-LIKE KINASE 36 840 - -
Bva01g01881 840 Gene3D Transferase(Phosphotransferase) domain 1 601 822 - -
Bva01g01881 840 SUPERFAMILY Protein kinase-like (PK-like) 514 799 IPR011009 -
Bva01g01881 840 Pfam Protein tyrosine and serine/threonine kinase 530 735 IPR001245 GO:0004672|GO:0006468
Bva01g01881 840 SMART serkin_6 524 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g01881 840 ProSitePatterns Protein kinases ATP-binding region signature. 530 553 IPR017441 GO:0005524
Bva01g01881 840 PANTHER OS07G0166700 PROTEIN 36 840 IPR045272 GO:0004714|GO:0006468
Bva01g01881 840 ProSiteProfiles Protein kinase domain profile. 524 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g01881 840 CDD STKc_IRAK 530 789 - -
Bva01g01881 840 ProSitePatterns Serine/Threonine protein kinases active-site signature. 646 658 IPR008271 GO:0004672|GO:0006468
Bva01g01881 840 Pfam Malectin-like domain 44 418 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01881 Bva-Chr1 19250964 19254249 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01881 34 804 Receptor kinase-like Gene Family AT3G51550 49.813 0.0 739
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Bva01g01881 Malectin_like 1.4e-40 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01881 - - gmx:100776859 1009.21