Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01837 ATGGCTCCTCAAGATTCCTCTGATTCTGATTCACATCAGAGACGTGCTGGTCTCCTAAAAGATCAAGTTCGTTTGGTAAAAAGGAAAGACACGGATCGCTATGAGATTGCTCCAATCCAAGAGAATCTATCATTTGAGAAGGGTTTCTTTATAGTAATCCGTGCTTGCCAGTTGTTGGCCCAAAAGAATGAGGGGATAATATTGGTAGGATTGGCAGGTCCTTCAGGAGCTGGGAAGACTGTATTCACGGAGAAGATACTCAATTTCATGCCCAGCATTGCAGTCATTTCAATGGATAATTACAATGATTCCAGCCGAATTGTTGATGGAAACTTTGACGATCCACGCTTGACAGACTATGACACATTGCTTCAGAATGTCCATGATTTAAAAGCTGGAAAGTCAGTCGAGGTTCCAATCTATGATTTCAAGTCCAGCTCACGTACAGGATACAGGACCGTTGAAGTCCCAAGCTCCCGAATTGTGATTATAGAAGGAATATATGCTTTGAGCGAGAAGTTGCGACCTCTACTTGACCTTCGAGTATCTGTAAGGGGTGGAGTTCACTTAGACCTTGTCAAACGAGTTATACGTGACATACAACGTGCGGGTCAAGAACCCGaagaaattatttctcaaatttctgAAACGGTATATCCAATGTACAAGGCCTTTATAGAGCCAGATCTTCAGACTGCGCATATCAAGATCACCAACAAGTTCAATCCATTTACTGGGTTCCAGAGTCCTACTTACATATTAAAGTCAGCAAGGAAGGTAGAAGTGGATCAAATTAGAGCTATTCTCACTGAAGATCACCGGGAATCAATGGAGCAGACTTATGACATATATCTTCTACCACCTGGTGAAGATCCAGAAACCTGCCAATCATATTTGCGGATGCGGAATAAGGAAGGGAAATATAGTCTCATGTTTGAGGAATGGGTGACAGATACTCCATTTGTCATATCGCCAAGAATCACTTTTGAGGTCAGTGTTCGCCTTCTAGGTGGACTAATGGCCCTGGGATACACAATAGCTACCATCCTTAAAAGAAACAGCCATGTATTTTCCGATGATAGGATTTGTGTGAAACTTGATTGGCTTGAGCAGCTTAATCGGCATTATATTCAGGTGCAAGGAAGAGATCGTTTAGTTGTAAAATGCTTAGCAGATCAGCTGGGTCTGGAAGGTTCCTACATTCCTCGTACCTACATTGAGCAAATTCAGATTGAGAAGCTTGTAAATGAAGTTACGGCTCTGCCAGAAGATTTGAAGACAAAATTCAGCCTTGATGAGGATTTGGTGTCAAGCCCCAATGGAACACTTTCTAGAACCTATGCAGAAAGGATTGCCCTGAGAAATAAGAATATGAGGAGTGGTATGTCCCAATCATATACGAACCAACGGGACAAGAATCTAGCCAAGCTTGCTGGATACACTGCTAACGGTCGAGGGTTTGGGCAAAGAAATCCGGATTCCTCCTCGACGGTAGCAAACCAGGGAGCTATGAATCAGCTTTCAGAACAAATTTCTTCACTCAATGATAGGATGGATGAGTTTACAAACCGTGTTGAAGAGCTGAACTCCAAGTTAACTAACAAGAAAAACTCTCCAAGTCAACAAAATATGGCACTCCAAGTTGAAGCTTGCAATGGTTCTGCTCACACCTCTTACTTCATTACTGGTTTGGGTAATCGTTCCCTAACTGGTTCTATAATGCCAAATTCCTCATCGTCATCACAGTTAGCTAAAGAGTCTCCTTTATTGGAAGAGATATCAAGTATTTCGCGGAGTCAGCGACAAATCATGCATCAACTAGACAATCTCAACAATCTTCTGCGGGCAAGCGTGGGAGAGAGGTCTCAGCAAACAAGAACCAACAGGAAAAACATAACTTGTGATTCCGaatcagaatcagaatcagaatCTACTGCAGTTCGAGTTACATTGACAGCAGTGGCCATTGGTTGTCTGGGGATCTTGTTGATGAAGGGTTTGTACTCCAGAAATTG 2015 0.4189 MAPQDSSDSDSHQRRAGLLKDQVRLVKRKDTDRYEIAPIQENLSFEKGFFIVIRACQLLAQKNEGIILVGLAGPSGAGKTVFTEKILNFMPSIAVISMDNYNDSSRIVDGNFDDPRLTDYDTLLQNVHDLKAGKSVEVPIYDFKSSSRTGYRTVEVPSSRIVIIEGIYALSEKLRPLLDLRVSVRGGVHLDLVKRVIRDIQRAGQEPEEIISQISETVYPMYKAFIEPDLQTAHIKITNKFNPFTGFQSPTYILKSARKVEVDQIRAILTEDHRESMEQTYDIYLLPPGEDPETCQSYLRMRNKEGKYSLMFEEWVTDTPFVISPRITFEVSVRLLGGLMALGYTIATILKRNSHVFSDDRICVKLDWLEQLNRHYIQVQGRDRLVVKCLADQLGLEGSYIPRTYIEQIQIEKLVNEVTALPEDLKTKFSLDEDLVSSPNGTLSRTYAERIALRNKNMRSGMSQSYTNQRDKNLAKLAGYTANGRGFGQRNPDSSSTVANQGAMNQLSEQISSLNDRMDEFTNRVEELNSKLTNKKNSPSQQNMALQVEACNGSAHTSYFITGLGNRSLTGSIMPNSSSSSQLAKESPLLEEISSISRSQRQIMHQLDNLNNLLRASVGERSQQTRTNRKNITCDSESESESESTAVRVTLTAVAIGCLGILLMKGLYSRN 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01837 671 PRINTS Uridine kinase signature 189 199 - -
Bva01g01837 671 PRINTS Uridine kinase signature 133 148 - -
Bva01g01837 671 PRINTS Uridine kinase signature 66 83 - -
Bva01g01837 671 PRINTS Uridine kinase signature 225 238 - -
Bva01g01837 671 MobiDBLite consensus disorder prediction 618 641 - -
Bva01g01837 671 ProSiteProfiles CYTH domain profile. 253 411 IPR023577 -
Bva01g01837 671 PANTHER PHOSPHORIBULOKINASE/URIDINE KINASE-LIKE PROTEIN 6 641 - -
Bva01g01837 671 Gene3D - 67 249 IPR027417 -
Bva01g01837 671 Pfam CYTH domain 270 405 IPR023577 -
Bva01g01837 671 Coils Coil 504 538 - -
Bva01g01837 671 SUPERFAMILY CYTH-like phosphatases 260 408 IPR033469 -
Bva01g01837 671 PANTHER URIDINE KINASE 6 641 - -
Bva01g01837 671 Gene3D - 255 414 - -
Bva01g01837 671 CDD UMPK_like 68 240 - -
Bva01g01837 671 Pfam Phosphoribulokinase / Uridine kinase family 69 237 IPR006083 GO:0005524|GO:0016301
Bva01g01837 671 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 64 239 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01837 Bva-Chr1 18921925 18928111 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01837 67 237 PRT Gene Family AT1G55810 28.333 4.03e-17 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01837 K00876 - gmx:100781286 1052.35