Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01834 ATGGAAAAGAGAGTGAATGCTGCTGCTGCTTTCTTTTGCTTGGCTTTCTTCTTGTTATGGACTTTAGAAGCTGCTGCTTTGCTTACTCCTAAAGGTGTAAACTATGAAGTGCAAGCTCTCATGGACATTAAAGGGTCTTTGAAGGATCCTCATAATTCCCTTTACAACTGGGATGGTAATGAAGTGGATCCTTGTAACTGGAATATGGTCACTTGTTCTCCTGATCATTTTGTGATTGCCTTAGGCATTCCAAGCCAGAACTTATCCGGGATTCTTTCACCAAGCGTAGGCAACTTAACATACCTGCAGTCTGTACTCCTTCAAGATAACAACATATATGGGCATATCCCCTCTGAGTTTGGGAAGCTCCAAAAGCTTGAAACTCTTGATCTTTCTGATAATCAATTCAGTGGTCAGCTTCCAGATACTCTCTCACACATGAAGAGTCTCCATTACTTGCGGCTAAATAATAACAGTCTCACTGGAACAATTCCATCCTCTGTGGCTAACATGACTCAGCTTGCCTTCATGGATATCTCTTATAATAACTTGAGTGGACCCGTACCCAAATTATATGCAAAGACATTCAATATTGTGGGCAATCCTCAGATATGTGCCCCTGGAACTGAGCAAAGCTGCTTTAGAACAGCACTGCTGTCTTCTACCTTGAATAACTCTCAAGGTCTACAATCCTCTGGTAAATCTAAGAACCACAGAGTTGCCTTGGCATTTGCTTCAAGCATAAGCTGCATCTGTCTAGTAATTGTGGGCTTTGGATTCTTTCTCTGGTGGAGACAAAGATACAACaagcaaattttctttgatgttAATGAACAACACCATGAAGAAATATACCTTGGAAACCTCAAGAAGTTCCATTTTAGGGAACTTCAGGCTGCTACAAATAACTTCAGCAGCAAGAACTTGGTCGGCCAAGGTGGCTTTGGAAATGTCTATAAAGGTTATCTCCCAGATGGTTCAGTGATAGCAGTAAAAAGGCTTAAAGATGGTAATGCCATTGGTGGTGAGATTCAATTTCAGACTGAAGTTGAGATGATCAGCTTAGCCGTGCATCGGAACCTCCTTCGCCTCTATGGATTCTGCATGACAACTACAGAGAGGATCTTGGTTTATCCATACATGTCCAATGGTAGTGTTGCTTCCCGTCTTAAAGCCAAGCCTACTTTGGATTGGGGAACAAGGAAGAGGATAGCATTAGGAGCTGCCAGAGGCTTACTCTATCTACATGAGCAGTGTGACCCCAAGATCATTCACAGGGATGTCAAGGCTGCAAACATCTTGCTTGATGATTACTGTGAAGCCATTGTAGGTGACTTCGGGTTGGCAAAGCTGTTGGATCACCGCGATTCTCATGTGACAACAGCAGTGAGAGGGACTGTAGGCCACATAGCCCCAGAGTATCTCTCAACAGGCCAATCCTCCGAGAAAACAGATGTTTTCGGGTTCGGAATCCTCCTCCTTGAATTGATTTCAGGCCAAAGAGCTCTTGAATTTGGGAAGGCAGCAAACCAGAAAGGAGCCATGCTTGACTGGGTGAAGAAAACCCATCAAGAGAAGAAACTTGACTTATTAGTCGACAAGGATCTGAAAAGCAACTATGACAGAATAGAGCTTGAAGAAATTGTTCAAGTTGCTCTTTTATGTACTCAGTATTTGCCAAGTCATAGACCTAAGATGTCTGAAGTGGTTCGGATGCTCGAAGGCGATGGACTAGCAGAGAAGTGGGAAGCATCACAGAGAGCTGAATCAACTAGAAGCAAAGCAAATGAATTCTCCTCTTCAGAGCGCTACTCGGATCTTACTGATGACTCTTCACTGCTTGCACAGGCAATGGAGCTTTCTGGACCAAGATG 1874 0.4312 MEKRVNAAAAFFCLAFFLLWTLEAAALLTPKGVNYEVQALMDIKGSLKDPHNSLYNWDGNEVDPCNWNMVTCSPDHFVIALGIPSQNLSGILSPSVGNLTYLQSVLLQDNNIYGHIPSEFGKLQKLETLDLSDNQFSGQLPDTLSHMKSLHYLRLNNNSLTGTIPSSVANMTQLAFMDISYNNLSGPVPKLYAKTFNIVGNPQICAPGTEQSCFRTALLSSTLNNSQGLQSSGKSKNHRVALAFASSISCICLVIVGFGFFLWWRQRYNKQIFFDVNEQHHEEIYLGNLKKFHFRELQAATNNFSSKNLVGQGGFGNVYKGYLPDGSVIAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCMTTTERILVYPYMSNGSVASRLKAKPTLDWGTRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDYCEAIVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGQRALEFGKAANQKGAMLDWVKKTHQEKKLDLLVDKDLKSNYDRIELEEIVQVALLCTQYLPSHRPKMSEVVRMLEGDGLAEKWEASQRAESTRSKANEFSSSERYSDLTDDSSLLAQAMELSGPR 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01834 624 MobiDBLite consensus disorder prediction 584 610 - -
Bva01g01834 624 SUPERFAMILY Protein kinase-like (PK-like) 281 574 IPR011009 -
Bva01g01834 624 Gene3D Transferase(Phosphotransferase) domain 1 381 593 - -
Bva01g01834 624 Pfam Leucine rich repeat N-terminal domain 34 73 IPR013210 -
Bva01g01834 624 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 8 624 - -
Bva01g01834 624 Pfam Leucine rich repeat 101 160 IPR001611 GO:0005515
Bva01g01834 624 ProSitePatterns Protein kinases ATP-binding region signature. 310 332 IPR017441 GO:0005524
Bva01g01834 624 Gene3D Ribonuclease Inhibitor 33 215 IPR032675 -
Bva01g01834 624 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 8 624 - -
Bva01g01834 624 Gene3D Phosphorylase Kinase; domain 1 273 380 - -
Bva01g01834 624 ProSitePatterns Serine/Threonine protein kinases active-site signature. 423 435 IPR008271 GO:0004672|GO:0006468
Bva01g01834 624 SMART serkin_6 304 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g01834 624 SUPERFAMILY L domain-like 35 198 - -
Bva01g01834 624 Pfam Protein kinase domain 305 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g01834 624 ProSiteProfiles Protein kinase domain profile. 304 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g01834 624 MobiDBLite consensus disorder prediction 591 610 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01834 Bva-Chr1 18911406 18915257 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01834 10 624 Receptor kinase-like Gene Family AT5G16000 72.320 0.0 939
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Bva01g01834 Pkinase 6.8e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01834 - - gmx:100790194 1048.88