Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01818 ATGTATGAAGAGGGTGGTGGTCTTGATCCCAATGCAACAATGGTACAAGGTACAGCACCTGCGGGCTCGTCAGAAGATTGCTTTTCCCAAATGGTACCAGGTCCATCACCACCACCAATTATCACTGTCACTGCCACGAATAGCTTTCCAGAGAATGTGGGGCTTTCTTTGGAAAACTTGGCATTCCCGGAAACCTGTGGAGAAGACGCTGCCACCCTCACAAATAGAGTTGCTGCAGCCACTGCCATGGAGATTGCACATCAACACCATCTGGGTTTTAAGCAGGAAAAATCATACAATGATAACAACAACTTTGACACCCATTTCCCACAAGAGCCAAATCATGATTCAAGTCCAGCATTTTACTTTGACAAGTCTAACGGTGATTGCCAAAATCATTATCAGGACCAACAATTTTTGCAAATGGAACTGCAAAATGGCACCCAAAGCTACCACTCTTACTCTACACCAGATCTCCTTAATCTTCTTCACTTGCCTAGATGCTCTCCTTCTGCAAACTCATCAATCTCTTTTATGAACCCTACCCAGACGGCCGCCAATCTTCAAAATCCTTCCTTTGTTGGCGGGTACCAACAAATCGGGGATGACAACACAAAATCTTCCTCTGTTTTGTATGACCCTTTCTTGCATTTGAACCTGCCTGCACAACCTCCAGCTATCAGAGAATTGCTTCAGTCTCTCCCCCATGGCTATAGCTTGCCAGCTTCAAGAAATGACTTTGTCATTGGTGCAGGAGGAGATGATAGAGAAGGCAATGGGCGAGCATATCAAGATGGAGATCTTGGGAGAGATTTCGAAAATGGAGTCCTAGAGTTTACTCAGGACATGGTTTCTGTTCgtaaaaaagaaggaaaaaggaacaaaCAGTTTACCAGTGAGAAGCAAAGAAGAGTGGATTTGGGTAGCAAATTTGAGGCTTTAGGAGATTTGATCCCAGGCCCCTCCAAGACTAAGAACGATAGAGCATCTGTGGTTGGTGATGCTATTATCTACATCAAAGAGCTGATTAGAACAGTGAATGAGCTCAAATTACTGGTGGAGATGAAAAGATGTCGGAGAGAAAGCGTCAAGAGGCGCAAGGTTGAGGATGCTGCAGGGTACTTGGAGAGCTGCAACTTAAAGCCACTTGGCGACCAAGACCTCTCTTACAATGGATGTTTAAGGAGCTCATGGCTGCAGAGGAAATCCAAAGATACCGAGGTTGATGTTCGCATTATTGATGATCAAGTGACAATCAAACTAGTTCAGAGAAAAAAGATCAATTGCTTGCTCTATGCTTCCAAGGTGTTGGATGAGCTTGAGCTGGATCTCCAACATGTTGCTGGTGGCCACATTGGCGATTTCTGCAGCTTCATGTTCAATAGCAAAATTTATGAAGGTTCTTCAGTGTATGCAAGTGCGATAGCCAACAAGCTTATTGAGGTAATGGATAAAAACTTCGCAGCAGCATG 1472 0.4382 MYEEGGGLDPNATMVQGTAPAGSSEDCFSQMVPGPSPPPIITVTATNSFPENVGLSLENLAFPETCGEDAATLTNRVAAATAMEIAHQHHLGFKQEKSYNDNNNFDTHFPQEPNHDSSPAFYFDKSNGDCQNHYQDQQFLQMELQNGTQSYHSYSTPDLLNLLHLPRCSPSANSSISFMNPTQTAANLQNPSFVGGYQQIGDDNTKSSSVLYDPFLHLNLPAQPPAIRELLQSLPHGYSLPASRNDFVIGAGGDDREGNGRAYQDGDLGRDFENGVLEFTQDMVSVRKKEGKRNKQFTSEKQRRVDLGSKFEALGDLIPGPSKTKNDRASVVGDAIIYIKELIRTVNELKLLVEMKRCRRESVKRRKVEDAAGYLESCNLKPLGDQDLSYNGCLRSSWLQRKSKDTEVDVRIIDDQVTIKLVQRKKINCLLYASKVLDELELDLQHVAGGHIGDFCSFMFNSKIYEGSSVYASAIANKLIEVMDKNFAAA 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01818 490 PANTHER TRANSCRIPTION FACTOR BHLH91 75 489 - -
Bva01g01818 490 CDD bHLH_AtMYC1_like 297 370 IPR045896 -
Bva01g01818 490 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 291 342 IPR011598 GO:0046983
Bva01g01818 490 MobiDBLite consensus disorder prediction 1 26 - -
Bva01g01818 490 Pfam Helix-loop-helix DNA-binding domain 292 342 IPR011598 GO:0046983
Bva01g01818 490 Gene3D - 281 362 IPR036638 GO:0046983
Bva01g01818 490 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 290 362 IPR036638 GO:0046983
Bva01g01818 490 SMART finulus 297 348 IPR011598 GO:0046983
Bva01g01818 490 PANTHER TRANSCRIPTION FACTOR BHLH91 75 489 IPR045895 GO:0006355|GO:0048658
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01818 Bva-Chr1 18827990 18829910 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01818 1 490 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31210 39.173 3.85e-80 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva01g01818 HLH 6.7e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01818 - - jre:118343678 459.529