LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bva01g01811	ATGAGGAGGGACAGAAGAAGGAAGCTACATTTCAGCAAGATCTATACTTTTAAATGCCTTAGACATGGATTCAAGGAAGATCATTCACAGATTGGGGGAAGAGGTTTTTCCAGGGTGGTCTTCTCCAATGAACCAGAAAGTTTTGAGGCTGCACTTTACAATTATGCAGATAATTCTGTCAGGTCTACGAAATACACTCTTACAACTTTCTTGCCCAAATCACTGTTTGAGCAGTTCAGGAGGGTGgctaatttctattttctagttACTGGGGTCTTGGCCTTCACTGCTCTTGCTCCCTATTCAGCTGTTAGTGCTATCGTTCCTTTGATAATTGTTGTCGGAGCAACCATGGTGAAAGAGGGTATTGAAGATTGGCGTCGGAAAATGCAGGATACTGAGGTGAACAATAGACGAGTTAAAAGGCATAATCGTGATGGCACTTTTACACATACAGAGTGGAAGAATCTGAGGGTAGGGGATATAGTGAAGGTAGAAAAGGATGAATTCTTTCCGGCTGATCTCCTATTGCTTTCGTCGAGTTATGAGGATGCAGTCTGCTATGTTGAGACCATGAACTTGGATGGGGAGACAAATCTTAAGGTAAAACAAGCATTGGAGATAACTTCTTCCTTACATGAGGATTTCAAATTTCGTGATTTTAAAGCCAAAGTCAAATGTGAAGACCCCAATGCAAATTTGTATTCCTTTGTTGGTGCCCTAGAGTTTGAAGGGCAACACTGTCCCCTTTCTCCACAGCAACTTCTCCTGAGAGACTCTAAACTCCGTAATACAGACTATGTATTTGGAGTTGTCATCTTCACTGGTCAAGACACTAAGGTTATTCAAAATTCTACTGATCCCCCttcaaaaagaagcaaaattgaGAGGAAGATGGATAGAATCATTTACTTCTTGTTTTgtattctaattctaatggCATTTGTTGGATCTATTTTCTTTGGCATTTCAACTAAAGATGACTATGAAAATGGGTTGATGAAAAGATGGTATCTAAGACCAGATGATTctacaattttctttgatcCGAAAAGAGCATCAGCTGCTgcattttttcattgtttgacTGCCTTGATGTTGTATAGCTTCTTCATTCCTATCTCCTTGTATGTATCAGTAGAAATTGTCAAGGTCCTTCAGAGCATCTTCATCAATCAAGATATACATATGTACTATGAGGAAGCTGACAAACCAGCTCATGCCCGTACTTCAAACTTGAATGAGGAACTTGGCCAAGTTGATACAATACTTTCTGATAAAACTGGAACTCTGACCTGCAATTCAATGGAGTTCATCAAATGTTCTATTGCTGGGGTAGCTTATGGCTGTGGTATTACCGAAGTTGAGAAGGCTATGAATAGAAGAAAAGGTTCAGGACTGAATCAAGAACTTGTTACTGGGTCAGATAGCATTGGGGTTTCTATTGATACAAAATCACCCATCAAAggctttaattttaaagatgaAAGGATGATGAATGGAAACTGGGTCAATGAGCCTCATGCAGATGTTATCCAGAAGTTTTTTCGCTTATTGGCAATCTGTCATACAGCAATACCTGAAGTAGATGAAGACACAGGAAATATATCCTACGAGGCTGAGTCCCCAGATGAAGCAGCATTTGTGATCGCAGCAAGAGAACTTGGCTTTGAATTCTATGAAAGGACACAGACTAGTTTGTCAATGTATGAGTTGGATGCAGTTTCTGGCAGCAAAGTTGAAAGgAATTATAAACTTCTcaatgttttagaatttaatagCTCGAGAAAGCGAATGTCTGTGATAGTGAGagataaagaaggaaaagttcAGTTACTGTGTAAGGGTGCTGACAGTGTCATGTTTGAGAGGCTTGCTAAGAATGGGAGGGAGTTCGAAGAAAAAACTATGGAGCATGTGCAGGAATATGCTGATGCAGGTCTAAGGACCCTAATACTGGCCTCTCGTGAACTCAATGAAGAAGAATACAAGGAATTTAATGAGCAATTTTCTAAGGCCAAGAATTCAGTTAGTGCAGATAGAGAAGCACTGATTGATGAGGTATCAGATAAGATCGAGAGGAATCTAATCCTTCTTGGTGCAACTGCTGTAGAGGACAAACTCCAAAATGGGGTTCCTAATTGCATTGACAAGCTTGCCCAGGCAGGTATTAAGATTTGGGTTTTGACCGGGGATAAAATGGAGACTGCCACCAATATTGGTTTTGCTTGTAGTTTACTTAGACAAGGAATGAAGcagattataattaatctgGACACTCCTGAAATTAAAGCATTGGAGAAAGTAGGGGAAAAGACTGCTATTGCTAAGGCATCAAAGGAAAGCGTGCTCCGTCAGATCATTGATGGCGCTGCACAGCTCAATGCATCCAGAGGGACCTCTCAGGTATTTGCTCTGATCATTGATGGAAAATCACTTGTTTATGCTCTTGAGGATGATGTGAAGAAGAAGTTTCTGGATCTGGCCCTTGGCTGTGCATCAGTTATTTGCTGTCGTTCATCACCAAAGCAAAAGGCACTGGTCACTAGACTGGTGAAGTTTGGAACTGGAAAAACAACATTAGCCATTGGTGATGGAGCCAATGATGTGGGAATGCTTCAAGAAGCCGATATAGGGGTCGGTATCAGTGGTGTTGAAGGAATGCAGGCTGTCATGTCTAGTGATATTGCAATTGCACAGTTCCGATATTTGGAACGGTTACTCCTTGTGCATGGACACTGGTGTTACCGGAGAATGTCAACAATGATATGCTATTTCTTCTACAAGAATATCACATTTGGTTTCACTTTGTTCTTGTACGAGGTGTATGCATCATTCTCTGGAATGGCTGCATACAATGACTGGTTTCTGTCTCTTTATAATGTCTTCTTTTCGTCACTACCTGTGATTGCCCTCGGGGTATTTGACCAGGATGTATCTCCCCGGTACTGTCTTAGGTTTCCTTTGCTTTATCAGGAAGGAGTGCAGAATGTTCTCTTTAGCTGGCCGCGTATACTCAGCCAAATGCTCAACGGATTTATTTGtgccattttaattttcttcttctgcacAAAAGCAATGGAGCTCCAAGCCTTTGACAAGGAAGGAAGAACTGCCGGGCGCGATATACTAGGAGCAACAATGTACACTTGCGTTGTTTGGGTTGTAAACTTGCAGATGGCACTTTCTATAAGTTACTTCACCATGATACAACATATCTTCATCTGGGGTTCCATTGCTTTCTGGTATTTCTTCCTCGTGGTGTACGGATCAATGTCTCCCGGATTTTCTGGGAATGCCTACGAAGTCTTTGTCGAAGCTCTTTTTCCGGCTCCTTCTTACTGGTCGGTGACCCTTTTCGTGGTGATTGCAACCTTAATACCATACTTCTCGTACTTAGCTCTTCAAATGAGGTTCTTTCCCATGTATCACGAACTGGTGCAATGGCTAAGGTACGAGGGGAAGACAAGTGATCCTGAATCTGTTGATATGGCAAACCAGAGTTCATTGCGGCCAACACTTGTGAGTGTTGGCTCGACAGCGCGCTTAGCAGCTAGGACTAACTATGTGAATGCAAGAACTTCTAACcatagata	3596	0.3982	MSPGFSGNAYEVFVEALFPAPSYWSVTLFVVIATLIPYFSYLALQMRFFPMYHELVQWLRYEGKTSDPESVDMANQSSLRPTLVSVGSTARLAARTNYVNARTSNHR	107

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bva01g01811	107	PANTHER	PHOSPHOLIPID-TRANSPORTING ATPASE	1	100	-	-
	Bva01g01811	107	PANTHER	PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE	1	100	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bva01g01811	Bva-Chr1	18801662	18808924	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bva01g01811	1	94	Primary Pumps ATPases	AT3G25610	62.766	6.38e-36	127

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bva01g01811	K01530		-	gmx:100785037	154.066