Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01683 ATGAACCCAAAAAGCCCCGTTACCTTGTCCTGCCCTTGTCCTTGGCTGATTTGCTCATTCACCCTCTTCTTCTGTCTGCAAATTAGAGCCACTCTGTGCGCTGTCCATCCAAATTTCACAACTTGCGTGCCCAAAAGCTGTGGCGATGGCCAAAATATAAGCTACCCATTTTACATCAAAGGAGTACAACCAGAGTTCTGTGGTTACCCAAATTTTGACCTCTCCTGCAGCAAAAATGGGCACCCAATTCTCAATCTGTCGAATACAGCTTATATCGTTCAGAAAATTTCATACCAGGATGAGTCAATCCGAGTGTCCGatcctaatttttcattatcaaaCACCACTAGTTGTGTTAATCTCGCGAAGAACTTCACTTATCCCGGTTTTCGATTCAGTGTTGTTCCAAACCAGACAGAGATGTTCTTGTTCTTCGGCTGCGACTTGGGCACATTTCCTCAAAGGCTGCTTAAGTACCAGGTGGGCTGTTCTGCAGAAAACCTTACCAGGTCTGTTCTGGGTCTGACTGGGGATGATGGAGATTTTGGCTTCGTGTCTAGGAGCTGCAATGGTGGcactgtgaaggcgatggttgAAAATGCATCTATAAGTGAGAATGAAGGAATTTTGGGGAGCATTAAAAGAGGGTTCTTGCTGAAGTGGGCAGCTACTAATTGCAGCGAGTGCATGAGAAGTGGAGGGAAGTGTGGATTTGACAGAGGGAAATACAGCTTCCAGTGCTTTTGTCCCGATAGACCTCATGCCTGGGATTGTGATGACACAGCTGAAAATGGAAATGGGTACCAAGGAAAGTGTCCTGAGTCATTCATTTGTGGAAATCTTGGGAGGATCCACTTCCCTTTCACCAAGGCAGAACAACTGGACTGTGGTTTATTGGCTATACATGGTTGTGATGATGGTAATTTTTTTGCAAGGAAAACTGTGCAACTGGAAAAGAATGGAAGATGGTTTGAAGTTAAGAGCGTCATCCAGAATCAGAATGAGTACAACTTCATAAAAATTGTTGACGAAGATCTGAATCAGAGTTTGGCATTCAGAACTTGTGATgccttcaaaagaaattttactcTTCCTCCCAACACtcctttggtttcttttcatATGGAAAATATAACCTTGTTCAGGTGCAACCGAAACCTCAATCTCAGCTTCCCAAAACGATATTTTAATCATTCGTGTGGTGACTATGTTGTCTATTATGCTCCTCCCACTCCAAATGATGACAACAATCGCAGCTCTTTGATAGGATGTTCAGTTCTTCAGCTTCCCAAACACTTGCCAGATTGTGAAGATCTTTTCACATTTGTATCTGGTAGTATCTATCTACAAGTTAGATTGTCTGATAATTGTTTTAAGTGTTACCGCAAAAGAGGAGGGCTATGTCAACATGACAGCAATAAAAACTTCTACTGCACCAAAGATGATAAGAAGGCTTTGAGGCTGGGGCTGGGACTGGGACTAGGTGTTGGATTTCCGCTCGTAGCTGTCTTGATAATCGGGTATCTCATTCGACACCggcataaaaagaaaaaacctacTCCTGATGTTCACTCCGAGTCAAGAGACATTTATGCTGATCCACACCCAGATAGTGGACATATCTACTTTGGGTTTGGGGTCCCTGTCTTCTCCTACAAGGAGCTTCAAGAAGCTACAAACAATTTTGACAATGCTGGACAAATTGGAGATGGAGGCTTTGGGAGTGTTTACTATGGGAAACTCCGGGATGGACGAGAAGTTGCTGTGAAGCGCCTATATGAGCACAACTATAGACGGTTAGAACAGTTCATGAATGAAGTTGAGATCCTCACTCGCTTGCGCCATGGAAATCTTGTCTCCCTCTATGGCTGCACTTCACACCGCAGCCATGAGCTTCTGCTGGTGTATGAATTCATTCCAAATGGCACTGTTGCTTGTCATCTCCATGTTGATTCAACAAAGCCTGGCTTTCTGCCATGGTctataagaatgaaaattgcaATAGAAACTGCTACTGCATTAGCTTATCTCCATGCTTCTGATATCATTCACCGTGATGTGAAAACCAACAACATTCTCCTTGACAACAGCTATTCTGTCAAGGTTGCAGATTTCGGGCTTTCAAGACTTTTCCCCACAGATGTCACCCATGTCTCTACAGCTCCACAAGGAACTCCGGGTTATGTTGACCCAGAATATCATCAATACTATCAACTTACTAGTAAGAGTGATGTATTCAGCTTTGGGGTTGTCCTCATTGAGCTGATATCATCCATGCCGGCAGTTGATATGAACAGGCATAGCGATGAGATTAACTTGTCGAGTCTAGCTGTTAAGAAGATTCAAAGTAGTGCATTGAGTGAACTTGTAGATCCTTCCCTTGGATTCGAGTCAGACGAAAATGTTAAAAGGATGATAGTTTCAGTTGCAGAATTGGCTTTTCAGTGCTTGCAGCGGGACAAGGAATTGAGACCTTCCATGGATGATGTTCTGAAGTTGCTGAGGAGAATAGAGGGTGGGAATAATGGACCTCAACAACTAGAGGAAGCAGCTGTTCATAGTGCTGGGATGTCAAACAGTAATGTACATCCACCTCCACCACCCTCCCCGGCTTGTGATCAGCTTGCATTACTGAGGAATGTGAAGCAACCAAGTTCACCAAACAGTGTGATTGATAACTGGGACAGTAAATCTACTACACCTAATGTCAGTGGTTA 2717 0.4203 MNEVEILTRLRHGNLVSLYGCTSHRSHELLLVYEFIPNGTVACHLHVDSTKPGFLPWSIRMKIAIETATALAYLHASDIIHRDVKTNNILLDNSYSVKVADFGLSRLFPTDVTHVSTAPQGTPGYVDPEYHQYYQLTSKSDVFSFGVVLIELISSMPAVDMNRHSDEINLSSLAVKKIQSSALSELVDPSLGFESDENVKRMIVSVAELAFQCLQRDKELRPSMDDVLKLLRRIEGGNNGPQQLEEAAVHSAGMSNSNVHPPPPPSPACDQLALLRNVKQPSSPNSVIDNWDSKSTTPNVSG 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01683 302 ProSiteProfiles Protein kinase domain profile. 1 234 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g01683 302 SMART serkin_6 1 234 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g01683 302 MobiDBLite consensus disorder prediction 276 302 - -
Bva01g01683 302 SUPERFAMILY Protein kinase-like (PK-like) 1 232 IPR011009 -
Bva01g01683 302 MobiDBLite consensus disorder prediction 249 302 - -
Bva01g01683 302 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 1 293 - -
Bva01g01683 302 Gene3D Phosphorylase Kinase; domain 1 1 36 - -
Bva01g01683 302 Gene3D Transferase(Phosphotransferase) domain 1 37 239 - -
Bva01g01683 302 Pfam Protein kinase domain 2 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g01683 302 ProSitePatterns Serine/Threonine protein kinases active-site signature. 79 91 IPR008271 GO:0004672|GO:0006468
Bva01g01683 302 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 1 293 IPR044652 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01683 Bva-Chr1 17910724 17917553 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01683 1 302 Receptor kinase-like Gene Family AT1G25390 64.026 5.93e-129 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Bva01g01683 Pkinase 1.9e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01683 - - aprc:113872417 451.825