Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01667 ATGGAGGCGCCACCACCTCCAACAACCGCTGCTCCGCCACTGTCCTCCACCGTTCCCCTTCCATCTCCTCACCTCAACTATCCCGACTCGGTGGATTCCTCTCCCCGGTCCCGCAACGCCGACTGGGATGACTCATTCCCTTCCACCAACGCCTCCTCCAAGCTCCGCCTCATGTGCAGCTATGGCGGCCACATCATTCCCCGCCCCCACGATAAATCCCTCTGCTACGTCGGCGGCGATACCCGTATCATCGTTGTTGAACGCCACACCTCCCTGGCTGAATTCTCTGCCCGACTCTCCAAAACATTTCTTAATGGCCGTTCCTTCACTCTGAAATACCAGCTACCGAGTGAAGACCTTGATTCCCTTATCTCCGTCACCACCGATGAGGACCTTGATAACATGATCGACGAATATGATCGCACCGCAGCCAATTCCACAAACCTATCTGTTAAACCTTCCAGGCTTCGCCTATTTCTCTTTCCGACTAAACCCGATTCCTCGCAATCAATCGGACCCATACTTGATAGCTCGGCCAAGTCTGACGACTGGTTCCTGAACGCTCTTAATAGTGCCGGCATGCTCAATAGAGGGTTCTCTGAATCTGCTTCCGTGAATTCTTTACTGGGTCTCGATGATGAGGTTGGTGGCAACAATCTCGACCCGGGTTCCAGAGAGGCTGAGGCTGCTCAAGCTGGATCTTTTGGAAATGGCAAGAATTTGAAGCAGGGGCAGGATGTTCACTCTGTGCCCGATTCCCCTATGCTGGAAACCACGTCTTCTTTTGGGTCTACTTCGTCATCACCGTTGGTGGCTAATTTGCCGCCGATTCGAGTTCGCGTAGATGATGTAAGTGGTGGTAAGGATCAGAAAGTGGGCATTGAGGAACAATTTGCCCAGCTTGGTGTTGGTTCTGGGCACAAGCAGGAGGAGGGTTTTGCTGTCTTGTCTTCGCCACCTCCGATGCCAGCTACCATTTTAGCTTCATCGGGCGTGCCCATCAGCTCCGCGGCGGTTGAACACCAGAATCGGGTTTTCTCGGATGATGAGAGATCAGACCACGGCGTGCCGGTGGGCAATCGAAAACCACCTACACCACAACCACAGCCTCAGGCTCTGCTTCCCCAATTTCACCAGAAGTCAACCGGCGTTGTTGATTTGCCTTCGCCAGATTCAGTTTCGAGTGATAGTAGTCTTACAAATGCAATGTCACGTCAAAAACCGGTAATTTATCAAGAACAAGTTCAAGTTCAAATTCCTTCCGGAACAAAGGTACCGAGTAACGCTGTTGATCCAAAACTTAATATTTCTGATCCACACGCTAGGATCCAGATGCAGCAACAGTTACAGGAACCTGGATATCTTTTGCAACAGCAATTTgaacaacagcagcagcaacagtTACAGGAACCTGGATATCTTTTGCAACAGCAGTTTgaacaacagcagcagcaacagtTACAGGAACCTGGATATCTTTTGCAACAGCAATTTgaacaacagcagcagcaacagtTACAGGAACCTGGATATCTTTTGCAACAGCAATTTgaacaacagcagcagcaacagtTACAGGAACCTGGATATCTTTTGCAAAAGCAATTTgaacaacagcagcagcaacattTACAGGAACCTGGATATCTTTTGCAGCAGCAATTTGAACAACAGCAGCAACAACctcaacagcagcagcaattTATACATGGCACACATTTCATTCACCATTCTCCTGCAGGGGCTGTGCCAATGCCTGCATATTACTCTGTATATCCTTCTCAGCAACAGCCTCATCCTCACCATCAGCTTGATCAGCAATACCCAGTATACTATGTGCCCGCAAGACAGCATCAAGCTTACAACTTACCTGTTCAGCCGCAGAATATCAGTGAAACCACCACCACCATACCTACCAGCCGCGCTCAAGCACCACCAAATCCTGCAATGGTTGCACCATCTGCCACTTATAACCCCATGAGAAATGCCCCCATTCCTAAGTCTGAAAGGACAGCAGCTGCATATAGAACTGCAACTGCAGGTACCCCTCAGTTAGTTCAAGTTCCTCCTAGTCAGCATCAGCAACAGTTTGTTGCTTACTCCCAGATTCATCATTCACCCCATTCTGTTGCTCCAAATTCTGCTTCCCCAGCTAGTTATGCTTATGACTATGTCGACCCTGCACATGCTCAAATATACTATACTCAACCTCTGGCACCCACAATGCCTTCACAATACCAAACCATGACAGCAGCTGCTACAGTGCTACCAGAAGTCTCCGCTCAACTGACTTCAGATAGCATGAAGCAGCAAATAAGAACCTCACAGCCATTATA 2336 0.4636 MEAPPPPTTAAPPLSSTVPLPSPHLNYPDSVDSSPRSRNADWDDSFPSTNASSKLRLMCSYGGHIIPRPHDKSLCYVGGDTRIIVVERHTSLAEFSARLSKTFLNGRSFTLKYQLPSEDLDSLISVTTDEDLDNMIDEYDRTAANSTNLSVKPSRLRLFLFPTKPDSSQSIGPILDSSAKSDDWFLNALNSAGMLNRGFSESASVNSLLGLDDEVGGNNLDPGSREAEAAQAGSFGNGKNLKQGQDVHSVPDSPMLETTSSFGSTSSSPLVANLPPIRVRVDDVSGGKDQKVGIEEQFAQLGVGSGHKQEEGFAVLSSPPPMPATILASSGVPISSAAVEHQNRVFSDDERSDHGVPVGNRKPPTPQPQPQALLPQFHQKSTGVVDLPSPDSVSSDSSLTNAMSRQKPVIYQEQVQVQIPSGTKVPSNAVDPKLNISDPHARIQMQQQLQEPGYLLQQQFEQQQQQQLQEPGYLLQQQFEQQQQQQLQEPGYLLQQQFEQQQQQQLQEPGYLLQQQFEQQQQQQLQEPGYLLQKQFEQQQQQHLQEPGYLLQQQFEQQQQQPQQQQQFIHGTHFIHHSPAGAVPMPAYYSVYPSQQQPHPHHQLDQQYPVYYVPARQHQAYNLPVQPQNISETTTTIPTSRAQAPPNPAMVAPSATYNPMRNAPIPKSERTAAAYRTATAGTPQLVQVPPSQHQQQFVAYSQIHHSPHSVAPNSASPASYAYDYVDPAHAQIYYTQPLAPTMPSQYQTMTAAATVLPEVSAQLTSDSMKQQIRTSQPL 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01667 778 Pfam PB1 domain 70 162 IPR000270 GO:0005515
Bva01g01667 778 MobiDBLite consensus disorder prediction 216 271 - -
Bva01g01667 778 PANTHER EXPRESSED PROTEIN 535 769 - -
Bva01g01667 778 SUPERFAMILY CAD & PB1 domains 70 171 - -
Bva01g01667 778 SMART PB1_new 69 163 IPR000270 GO:0005515
Bva01g01667 778 MobiDBLite consensus disorder prediction 236 271 - -
Bva01g01667 778 ProSiteProfiles PB1 domain profile. 54 154 IPR000270 GO:0005515
Bva01g01667 778 PANTHER OS05G0427100 PROTEIN-RELATED 8 564 - -
Bva01g01667 778 PANTHER OS05G0427100 PROTEIN-RELATED 535 769 - -
Bva01g01667 778 MobiDBLite consensus disorder prediction 382 401 - -
Bva01g01667 778 MobiDBLite consensus disorder prediction 1 45 - -
Bva01g01667 778 CDD PB1_UP2 58 161 - -
Bva01g01667 778 MobiDBLite consensus disorder prediction 1 19 - -
Bva01g01667 778 MobiDBLite consensus disorder prediction 345 372 - -
Bva01g01667 778 Gene3D - 74 162 - -
Bva01g01667 778 PANTHER EXPRESSED PROTEIN 8 564 - -
Bva01g01667 778 MobiDBLite consensus disorder prediction 20 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01667 Bva-Chr1 17823773 17828336 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01667 30 239 MAP Kinase Kinase Kinase AT3G46920 31.944 9.89e-25 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01667 - - cpep:111789411 757.288