Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01597 ATGGAATCAACAAGCTTCATTTCCCTCAAGTTCTATTCTCTGCTCTTCTTGTTCCTCATCCACGTCTCAGCTTCAAACTCAACCCCTACATTCCCAAAACAAGCACTGCCCACCAAAACTGGCTACCTTCCAGTTATCCCTTCTTCCAAATCCGCCATTTACTTCACATTCTATGAAGCTCAGACCTCAGAATACCCTCTTTCAGAAACCccacttgtcatttggctccAGGGTGGCCCTGGAAGCTCCTCCATGATCGGCAACTTCTTTGAGCTTGGTCCCTGGCGTGTCACCTCTGAACCGCTCGCCCTCGAGCCCAACCCAGGTGCTTGGAACAGAATCTTTGGACTTGTTTTCCTAGATAACCCAATTGGAACTGGCTTCAGCATAGCTTCAAAGCAAGAAGAGATCCCAAGAGATCAAGTTTCTGTTGCAAAACACCTCTTCGCTGCTATAACGAAGTTCATAGAGCTAGACCCCGATTTCAAAACTCGCCCAATTTACATCACCGGCGAAAGCTATGCTGGGAAGTACGTTCCAGCAATTGGGTATTACATTTTGAAGATGAATGAGAAATTGCCAGTTTCCCAAAGGTTAAATTTGGCTGGTGTGGCAATTGGGGATGGGTTAACAGACCCAGTAACCCAGGTGGCAACTCATGCTGTGAATGCCTACTATGTTGGTTTAATCAATGAAAGACAGAAGATTGAACTAGAGAAGCTTCAGTCAGAGGCAATCAGATTGACGCTGATCGAGAATTGGACTGAAGCAAGGACCGCCAGGAGCAGGGTGTTCCAAACACTGTCCAACATGACTGGGTTGGCTACTTTGTTTGATTATACAAAGTCAGTCCCATATAAAACTCATTTGGTAAATGAATTGTTGaattttagagaaataaagaagCTTTTGGGGGTGGATGAGTCTATTGTGTTCAAGTCTTCTAGTGAGGTTGTGAACGATATATTGGGAGATGATGTGATGAAGAGTGTCAAGTTTATGGCTGAGTACTTAGTCCAAAATAGCAAGGTTTTGCTGTATCAAGGTCAACATGATTTGCAGGGTGGAGTGCTGCAAGTGGAGGCTTGGGTGAAGACAATGAAATGGGAAGGGATTGAGGAGTTTCTGAATGCAGATAGGAAGCTTTGGAAGGTGAATGGAGAGCTTGCTGGGTATGTGCAGAAATGGAAGAATCTCACTAATGTTGTGGTTTTGGGTGCTGGACATCTTTTGCCTGCTGATCAAGCTGTGAATTCTCAAGCTATGATAGAAGACTGGGTTTTGGAAAAGGGTGTGTTTAGCAGTGAGTA 1310 0.4351 MESTSFISLKFYSLLFLFLIHVSASNSTPTFPKQALPTKTGYLPVIPSSKSAIYFTFYEAQTSEYPLSETPLVIWLQGGPGSSSMIGNFFELGPWRVTSEPLALEPNPGAWNRIFGLVFLDNPIGTGFSIASKQEEIPRDQVSVAKHLFAAITKFIELDPDFKTRPIYITGESYAGKYVPAIGYYILKMNEKLPVSQRLNLAGVAIGDGLTDPVTQVATHAVNAYYVGLINERQKIELEKLQSEAIRLTLIENWTEARTARSRVFQTLSNMTGLATLFDYTKSVPYKTHLVNELLNFREIKKLLGVDESIVFKSSSEVVNDILGDDVMKSVKFMAEYLVQNSKVLLYQGQHDLQGGVLQVEAWVKTMKWEGIEEFLNADRKLWKVNGELAGYVQKWKNLTNVVVLGAGHLLPADQAVNSQAMIEDWVLEKGVFSSE 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01597 436 ProSitePatterns Serine carboxypeptidases, serine active site. 169 176 IPR018202 GO:0004185
Bva01g01597 436 Pfam Serine carboxypeptidase 35 427 IPR001563 GO:0004185|GO:0006508
Bva01g01597 436 SUPERFAMILY alpha/beta-Hydrolases 36 427 IPR029058 -
Bva01g01597 436 PRINTS Carboxypeptidase C serine protease (S10) family signature 399 412 IPR001563 GO:0004185|GO:0006508
Bva01g01597 436 PRINTS Carboxypeptidase C serine protease (S10) family signature 107 119 IPR001563 GO:0004185|GO:0006508
Bva01g01597 436 PRINTS Carboxypeptidase C serine protease (S10) family signature 120 130 IPR001563 GO:0004185|GO:0006508
Bva01g01597 436 PRINTS Carboxypeptidase C serine protease (S10) family signature 155 180 IPR001563 GO:0004185|GO:0006508
Bva01g01597 436 PANTHER CARBOXYPEPTIDASE 28 425 - -
Bva01g01597 436 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 28 425 IPR001563 GO:0004185|GO:0006508
Bva01g01597 436 Coils Coil 231 251 - -
Bva01g01597 436 Gene3D alpha/beta hydrolase 20 434 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01597 Bva-Chr1 17274050 17277280 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01597 296 427 Calmodulin-binding Proteins AT2G22960 24.060 2.76e-09 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01597 K09645 - gmx:102663282 612.838