Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01594 ATGAAAGCTACGAAAGAGCGAAAACGCCAACATCTTAAACTAGTAGTGGTGATAATTTCTGTGGTTGTTTTTCTGCTTCTATCGTCATCTATTCTTGCCATCTATTGCctgagaaaaggaaacagaaaatCATCTTCAAGTTCACCAACAATTGACTTGCTTTCAAAGGTGTCGTACCAAAGCCTATACCAAGCAACTGATGGGTTCTCACCCAGCAACTTGATAGGCACTGGAGGCTTTGGCTCTGTCTATAAGGGAAGGCTTGAGTCTGAAGAAGGAGTTGTTGCTATAAAGGTCCTTAACCTTCAAAGGACGGGAGCTGACAAGAGTTTCATTGCCGAATGTAATGCTCTTAAAAACATTCGACATAGAAATTTGGTCAAGATTTTAACATGTTGCTCCAGCATAGATTACAAGGGTCAAACATTCAAAGCTCTAGTTTTTGAGTTCATGACAAATGGTTGTTTAGAGAATTGGTTGCATCATGGGATAGAAACTGCTGAGCATCAAAGAACATTGGATCTCCGTCAAAGGTTAACTATTGTTATTGACATAGCTTCTGCATTACATTATCTTCACATTGAATGTAAGCAACCCATTGTTCATTGCGACTTAAAGCCGAGCAATATCCTTCTTGATGATGATCTGGTTGCTCGTGTGGGTGATTTTGGATTGGCAAGACTTCTTTCAACTATTACCAGCCTCTCTAACACCAGCACAATTGGGATAAAGGGAACCATTGGCTATGCTCCTCCAGagtatGGAATGGGTTATGAGGTGTCAACAAAAGGTGATATGTACAGTTTTGGGATCCTCATGTTGGAAATATTAACCGGAAGAAGGCCCACGGAAGAAATGTTTAAAGAAGGCTACAATCTCCACAAACATGTGAGAGCTGCACTCCCGAACATTTTACAGATCATAGATCCAGTTCTACTGCCAAGAAAATTCGAACAGACAACAGCAGCAATAGAAGCAGATATAGACATGGAGAACCCGACTGATTTACATCCTAAAGCCAAGAATTGCTTTCTTTCACTATGTAAGATTGGACTTGCTTGTTCAGTGGAATTACCAAATGAAAGAATGAACATGGTGGATGTCACTATGGAGTTGAATCAAATCAAGAAAGCATTTCTTGATTGTGGGATCAATGGAGGCAGAGTACACatata 1175 0.394 MKATKERKRQHLKLVVVIISVVVFLLLSSSILAIYCLRKGNRKSSSSSPTIDLLSKVSYQSLYQATDGFSPSNLIGTGGFGSVYKGRLESEEGVVAIKVLNLQRTGADKSFIAECNALKNIRHRNLVKILTCCSSIDYKGQTFKALVFEFMTNGCLENWLHHGIETAEHQRTLDLRQRLTIVIDIASALHYLHIECKQPIVHCDLKPSNILLDDDLVARVGDFGLARLLSTITSLSNTSTIGIKGTIGYAPPEYGMGYEVSTKGDMYSFGILMLEILTGRRPTEEMFKEGYNLHKHVRAALPNILQIIDPVLLPRKFEQTTAAIEADIDMENPTDLHPKAKNCFLSLCKIGLACSVELPNERMNMVDVTMELNQIKKAFLDCGINGGRVHI 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01594 391 ProSitePatterns Serine/Threonine protein kinases active-site signature. 200 212 IPR008271 GO:0004672|GO:0006468
Bva01g01594 391 SUPERFAMILY Protein kinase-like (PK-like) 42 372 IPR011009 -
Bva01g01594 391 ProSitePatterns Protein kinases ATP-binding region signature. 75 98 IPR017441 GO:0005524
Bva01g01594 391 ProSiteProfiles Protein kinase domain profile. 69 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g01594 391 Pfam Protein kinase domain 72 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g01594 391 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 3 384 - -
Bva01g01594 391 Gene3D Phosphorylase Kinase; domain 1 51 150 - -
Bva01g01594 391 Gene3D Transferase(Phosphotransferase) domain 1 151 381 - -
Bva01g01594 391 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 3 384 - -
Bva01g01594 391 SMART serkin_6 69 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01594 Bva-Chr1 17268883 17270179 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01594 6 380 Receptor kinase-like Gene Family AT3G47570 46.253 1.37e-104 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Bva01g01594 Pkinase 4.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01594 - - gmx:100792724 451.055