Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01593 ATGAATCCCACTAGATCTGCTTCCATGTCACCTGCATGTTGGTCCATATTCTTTTGGGTGCTTCATTTCTTCCCATTATTGATCTGGTTTCAACTTAATGCTGCTGCTGCAATAGGAAACCAGACTGATCACTTGGCATTGCTAAAATTTAAGGAATCAATATCCAAGGATCCTTATGGAATCCTTGCCTTTTGGAATAGTACTTCCCACTTCTGCACTTGGAATGGAATCATATGCAGCCGTCGACATGAAAGAGTTACCGTGTTGAATCTGCAAAGATATGGCTTGCATGGATTCATATCACCACACCTTGGCAACCTCTCTTTTCTCAGAATTCTCAACCTCCAGGACAACAGCTTCAATGATGAGATCCCCCAGGAATTAGGTCGTTTAATCCGGCTACAAGAACTCATGCTCACCAATAACACCTTGGCGGGGAACATTCCTACCAACTTGACAAGCTGCTCTCAACTCAAGGGTTTATATTTGGAACGGAATAATCTTACTGGCAAGATACCCAGGGAGATTGACTCTTTAAGAAAGCTTGAAAGGTTGTTTCTTTCAACAAACATGTTGACAGGTCAAATCCCTACTTCCATAGGAAATCTTTCTTCACTTAGTACTCTTCATGCACAAGAAAATAGCTTAGAAGGAAGTCCCCCAGAAGAAATAGGCCATATGAAAAACTTGACAATTCTAAATATATCTGTCAACAAATTGTCCGGTAAGCTTCCTTCTTCACTCTACAACATGTCATCTCTCACAAAGATCTATCTTACGAGCAATCAATTTAGAGGATCCCTTCCAGCAAACATGTTTGTCACCCTCCCCAGTCTCCAACAATTTGCCATGGCTTACAATCAAATGTCAGGTCCAATCCCAACTTCTGTGACAAATGCATCTAAACTTATTTTGCTTGATTTCGTTGACAACCATTTGGTAGGACAAGTTCCGAGTCTAGGAAACCTAAAAGACCTCCAAATCCTTAATTTAGCTGAAAATAGTTTGGGTAGTAATTCAAACAAGGACTTAgagtttttaaaacttatgaCAAACTGTAGTAAATTGCGCATTCTCGGTTTAACCTTGAATAGTCTTGGAGGTTCTTTACCTAATTCCATAGGCAATTTGTCAACTCAACTTGAAAGTCTATACCTTGGCGGCAATCAGATATATGGTGAAATTCCTGCAACAATAGGAAATCTCGTCCACTTAGATCTCTTAGCTATGGAATCCAACCATCTTTCTGGCATCATTCCAACCAGTTTTGGCAAGTTACACAAGATAGAACTTTTAAGTCTTCAGTTTTTAGACTTGTCACAGAACAACTTGTCTGGATCAATTCCGCAAGCCCTGCAAGGTATTTCTACTCTAGAATActtgaatatttcttttaacatgttGGATGGCGAAGTACCCACTAAAGGTGTCTTTGCAAATGCAAGTGCTGTAGCAGTGATTGGCAAAAATAAGCTTTGTGGGGGTATCTCAGAGTTACAACTACCACCATGCCCCATGAAAGctacgaaaaagaaaaagcgcCAACATCATAAACTAGTAGTGGTGATAATTTGTGTGGTTGTTTTTCTGCTTCTATTGTCATCTATTCTTACCATCTATTGcctgagaaaaagaaacagaaaatcaaCTTCCAATTCACCAACAATTGACTTGCTTTCAAAGGTGTCGTACCAAAGCCTATACCAAGCAACAGATGGGTTCTCACCCAGCAACTTGATAGGCACTGGAGGCTTTGGCTCTGTGTATAAGGGAAGGCTTGAGTCTGAAGAAGGAGTTGTTGCTATAAAGGTCCTTAACCTTCGAAGGACTGGAGCTGACAAGAGTTTCATTGCTGAATGTAATGCTCTTAGAAATATTCGACATAGAAATTTGGTCAAGATTTTAACATGTTGCTCCAGCATAGATTACAAGGGTCAAACATTCAAAGCTCTAGTTTTTGAGTACATGACAAATGGTTGTTTAGAGAATTGGTTGCATCATGGGATAGAAACTGCTGAGCATCAAAGAACATTGGATCTCCGTCAAAGGTTAACTATTGTTATTGACATAGCTTCTGCATTACATTATCTTCACATTGAATGTAAGCAACCCATTGCTCATTGTGACTTAAAGCCGAGCAATATCCTTCTTGATGATGATCTGGTTGCTCGTGTGGGTGATTTTGGATTGGCAAGACTTCTTTCAACTATTACCAGCCTCTCTAACACCAGCACAATTGGGATAAAGGGAACCATTGGCTATGCTCCTCCAGagtATGGAATGGGTTCTGAGGTGTCAAGAGAAGGTGATATGTATAGTTTTGGGATTCTCATGTCAGAAATATTAACCGGAAGGAGACCCACAGAGGAAATGTTCAAAGAAGGTTATAATCTCCACAACCATGTGAGAACTGCACTTCCAGACAACCTTTCACAGATTATAGACCCAGCTCTACTGCCAAGAGAATTCCAACAGacaacaacagcagcaacGGAAGCAGAAATAGACTTGGAGAACCCGACACATTTACATCCTAATGTCAATAAGTGCCTGCTTTCACTATGTAGGATTGGACTTGCTTGTTCAGTGGAATCACCGAATGAAAGAATGAATGTGGTGGATGTCACAAAGGAATTGAATCTAATCAAGAAAGCCTTTCTTGCTGATGGGATCAATGGAGGCAGAGCACGCatata 2696 0.3898 MNPTRSASMSPACWSIFFWVLHFFPLLIWFQLNAAAAIGNQTDHLALLKFKESISKDPYGILAFWNSTSHFCTWNGIICSRRHERVTVLNLQRYGLHGFISPHLGNLSFLRILNLQDNSFNDEIPQELGRLIRLQELMLTNNTLAGNIPTNLTSCSQLKGLYLERNNLTGKIPREIDSLRKLERLFLSTNMLTGQIPTSIGNLSSLSTLHAQENSLEGSPPEEIGHMKNLTILNISVNKLSGKLPSSLYNMSSLTKIYLTSNQFRGSLPANMFVTLPSLQQFAMAYNQMSGPIPTSVTNASKLILLDFVDNHLVGQVPSLGNLKDLQILNLAENSLGSNSNKDLEFLKLMTNCSKLRILGLTLNSLGGSLPNSIGNLSTQLESLYLGGNQIYGEIPATIGNLVHLDLLAMESNHLSGIIPTSFGKLHKIELLSLQFLDLSQNNLSGSIPQALQGISTLEYLNISFNMLDGEVPTKGVFANASAVAVIGKNKLCGGISELQLPPCPMKATKKKKRQHHKLVVVIICVVVFLLLLSSILTIYCLRKRNRKSTSNSPTIDLLSKVSYQSLYQATDGFSPSNLIGTGGFGSVYKGRLESEEGVVAIKVLNLRRTGADKSFIAECNALRNIRHRNLVKILTCCSSIDYKGQTFKALVFEYMTNGCLENWLHHGIETAEHQRTLDLRQRLTIVIDIASALHYLHIECKQPIAHCDLKPSNILLDDDLVARVGDFGLARLLSTITSLSNTSTIGIKGTIGYAPPEYGMGSEVSREGDMYSFGILMSEILTGRRPTEEMFKEGYNLHNHVRTALPDNLSQIIDPALLPREFQQTTTAATEAEIDLENPTHLHPNVNKCLLSLCRIGLACSVESPNERMNVVDVTKELNLIKKAFLADGINGGRARI 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01593 898 PANTHER LRR RECEPTOR-LIKE KINASE 432 889 - -
Bva01g01593 898 PANTHER LRR RECEPTOR-LIKE KINASE 28 434 - -
Bva01g01593 898 ProSiteProfiles Protein kinase domain profile. 574 847 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g01593 898 Pfam Leucine Rich Repeat 433 454 IPR001611 GO:0005515
Bva01g01593 898 Pfam Protein kinase domain 577 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g01593 898 Gene3D Transferase(Phosphotransferase) domain 1 656 889 - -
Bva01g01593 898 SUPERFAMILY L domain-like 41 336 - -
Bva01g01593 898 Pfam Leucine rich repeat 205 264 IPR001611 GO:0005515
Bva01g01593 898 Pfam Leucine rich repeat 133 192 IPR001611 GO:0005515
Bva01g01593 898 Gene3D Ribonuclease Inhibitor 40 199 IPR032675 -
Bva01g01593 898 Pfam Leucine rich repeat N-terminal domain 41 80 IPR013210 -
Bva01g01593 898 SUPERFAMILY L domain-like 269 495 - -
Bva01g01593 898 SMART serkin_6 574 887 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g01593 898 Gene3D Phosphorylase Kinase; domain 1 556 655 - -
Bva01g01593 898 ProSitePatterns Protein kinases ATP-binding region signature. 580 603 IPR017441 GO:0005524
Bva01g01593 898 PANTHER OS04G0122200 PROTEIN 432 889 - -
Bva01g01593 898 PANTHER OS04G0122200 PROTEIN 28 434 - -
Bva01g01593 898 Gene3D Ribonuclease Inhibitor 206 513 IPR032675 -
Bva01g01593 898 SMART LRR_typ_2 179 203 IPR003591 -
Bva01g01593 898 SMART LRR_typ_2 251 275 IPR003591 -
Bva01g01593 898 SMART LRR_typ_2 107 131 IPR003591 -
Bva01g01593 898 SMART LRR_typ_2 431 454 IPR003591 -
Bva01g01593 898 SMART LRR_typ_2 402 425 IPR003591 -
Bva01g01593 898 SUPERFAMILY Protein kinase-like (PK-like) 548 879 IPR011009 -
Bva01g01593 898 SMART LRR_sd22_2 179 205 - -
Bva01g01593 898 SMART LRR_sd22_2 431 457 - -
Bva01g01593 898 SMART LRR_sd22_2 378 404 - -
Bva01g01593 898 ProSitePatterns Serine/Threonine protein kinases active-site signature. 705 717 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01593 Bva-Chr1 17264060 17267303 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01593 17 888 Receptor kinase-like Gene Family AT5G20480 35.459 0.0 560
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Bva01g01593 Pkinase 2.3e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01593 - - ccaj:109792361 888.641