Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01592 ATGACATTTGGTTCTGTATATAAGGGAACGCTTGAGTCTCAAGAAGGAGTTGTTGCTCTAAAGGTCCTTAACCTCCAAAGGAGGGGAGCTGACAAGAGTTTCATTGCCGAATGTAATGCTCTTAGAAATATACGACATAGAAATTTGACCAAGATTTTAACACGTTGCTCTAGCATAAATTACAAGGGCCAAACATTCAAAGCTCTAGTTTTTGAGTACATGACAAATGGTTGCTTAGAGAATTGGTTGCATCATGTGACAAAAATTGCAGAGCAGGCAAGAACATTGGATCTTAGTCAAAGGTTAAATATCTGTGTTGACATTGCTTCAGGATTACATTATCTTCACATTGAATGTGCGCAACCCATTGTTCATTATGACTTAAAGCCAAGCAATATCCTTCTTGATGATGATATGGTTGCTCATATGGGTGATATTGGATTGGCAAGGCTTCTTTCAACTATTTTTGGCCCTTTTGATAAGCAAACCAGCACCATTGGGATAAAGGGAACCATTGGCTATGCTCCTCCAGGTAGTTTCATATG 545 0.389 MTFGSVYKGTLESQEGVVALKVLNLQRRGADKSFIAECNALRNIRHRNLTKILTRCSSINYKGQTFKALVFEYMTNGCLENWLHHVTKIAEQARTLDLSQRLNICVDIASGLHYLHIECAQPIVHYDLKPSNILLDDDMVAHMGDIGLARLLSTIFGPFDKQTSTIGIKGTIGYAPPGSFI 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01592 181 Gene3D Transferase(Phosphotransferase) domain 1 2 180 - -
Bva01g01592 181 SMART serkin_6 2 181 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g01592 181 ProSiteProfiles Protein kinase domain profile. 1 181 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g01592 181 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 2 177 - -
Bva01g01592 181 ProSitePatterns Serine/Threonine protein kinases active-site signature. 123 135 IPR008271 GO:0004672|GO:0006468
Bva01g01592 181 Pfam Protein tyrosine and serine/threonine kinase 2 152 IPR001245 GO:0004672|GO:0006468
Bva01g01592 181 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 2 177 - -
Bva01g01592 181 SUPERFAMILY Protein kinase-like (PK-like) 2 177 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01592 Bva-Chr1 17260983 17261528 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01592 2 177 Receptor kinase-like Gene Family AT3G47570 56.983 4.05e-65 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Bva01g01592 PK_Tyr_Ser-Thr 1.3e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01592 - - gmx:102664380 256.144