Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01591 ATGGAATCAACAAGCTTCATTTCCCTCAAGTTCTATTCTCTGCTCTTCTTGTTCCTCATCCATGCCTCAGCTTCAAACACAACCCCTCAATTCCCAAAACAAGCACTGCCCACCAAAACTGGCTACCTTCCAGTTATCCCTTCTTCCAAATCCGCCATTTACTTCACATTCTATGAAGCTCAGACCTCAGAATACCCTCTTTCAGAAATCccacttgtcatttggctccAGGGTGGCCCTGGAGGCTCATCCATGATCGGCAACTTCTTTGAGCTTGGTCCCTGGCGTGTCACCTCTGAACCGCTCACCCTCGAGCCCAACCCAGGTGCTTGGAACAGAATCTTTGGACTTGTTTTCCTAGATAACCCAATTGGAACTGGCTTCAGCATAGCTTCAAAGCAAGAAGAGATCCCAAGAGATCAAGTTTCTGTTGCAAAACACCTCTTTGCTGCTATAACGAAGTTCATAGAGCTAGACCCAGATTTCAAAACTCGCCCAATTTACATCACCGGCGAAAGCTATGCTGGGAAGTACGTTCCAGCAATTGGCTATTACATTTTGAAGATGAATGAGAAATCGCCAGTTTCCCAAAGGTTAAATTTGGCTGGTGTGGCAATTGGGGATGGGTTAACAGACCCAGTAACCCAAGTGGCAACTCATGCTGTGAATGCCTATTTTGTTGGTTTAATCAATGAAAGACAGAAGATTGAACTAGAGAAGCTTCAGTCAGAGGCAATCAGATTGACGCTGATCGAGAATTGGACTGAAGCAAGGACCGCCAGAAGCAGGGTGTTCCAAACACTGTACAACATGACTGGGTTGGCTACGTTGTTTGATTATACAAAGTCAGTCCCATATAAAACTCATTTGGTAAACGAATTGTTGaattttagagaaataaagaagCTTTTGGGGGTGGATGAGTCTTTTGTGTTCAAGTCTTCTAGTGAGGTTGTGAACGATATATTGGGAGATGATGTGATGAAGAGTGTCAAGTTTATGGCTGAGTACTTAGTCCAAAATAGCAAGGTTTTGCTGTATCAAGGTCAATATGATTTGCAGGATGGAGTGCTGCAAGTGGAGGCTTGGGTGAAGACAATGAAATGGGAAGGGATTGAGGAGTTTCTGAATGCAGATAGGAAGCATTGGATGGTGAATGGAGAGCTTGCGGGGTATGTGCAGAAATGGAAGAATCTCACTAATGTTGTGGTTTTGGGTGCTGGACATCTTTTGCCTGCTGATCAAGCTGTGAATTCTCAAGCTATGATAGAAGACTGGGTTTTGGAAAAGGGTGTGTTTAGCAGTGAGTA 1310 0.4305 MESTSFISLKFYSLLFLFLIHASASNTTPQFPKQALPTKTGYLPVIPSSKSAIYFTFYEAQTSEYPLSEIPLVIWLQGGPGGSSMIGNFFELGPWRVTSEPLTLEPNPGAWNRIFGLVFLDNPIGTGFSIASKQEEIPRDQVSVAKHLFAAITKFIELDPDFKTRPIYITGESYAGKYVPAIGYYILKMNEKSPVSQRLNLAGVAIGDGLTDPVTQVATHAVNAYFVGLINERQKIELEKLQSEAIRLTLIENWTEARTARSRVFQTLYNMTGLATLFDYTKSVPYKTHLVNELLNFREIKKLLGVDESFVFKSSSEVVNDILGDDVMKSVKFMAEYLVQNSKVLLYQGQYDLQDGVLQVEAWVKTMKWEGIEEFLNADRKHWMVNGELAGYVQKWKNLTNVVVLGAGHLLPADQAVNSQAMIEDWVLEKGVFSSE 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01591 436 ProSitePatterns Serine carboxypeptidases, serine active site. 169 176 IPR018202 GO:0004185
Bva01g01591 436 PRINTS Carboxypeptidase C serine protease (S10) family signature 399 412 IPR001563 GO:0004185|GO:0006508
Bva01g01591 436 PRINTS Carboxypeptidase C serine protease (S10) family signature 107 119 IPR001563 GO:0004185|GO:0006508
Bva01g01591 436 PRINTS Carboxypeptidase C serine protease (S10) family signature 120 130 IPR001563 GO:0004185|GO:0006508
Bva01g01591 436 PRINTS Carboxypeptidase C serine protease (S10) family signature 155 180 IPR001563 GO:0004185|GO:0006508
Bva01g01591 436 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 29 425 IPR001563 GO:0004185|GO:0006508
Bva01g01591 436 Coils Coil 231 251 - -
Bva01g01591 436 SUPERFAMILY alpha/beta-Hydrolases 36 427 IPR029058 -
Bva01g01591 436 Pfam Serine carboxypeptidase 35 427 IPR001563 GO:0004185|GO:0006508
Bva01g01591 436 Gene3D alpha/beta hydrolase 20 434 IPR029058 -
Bva01g01591 436 PANTHER CARBOXYPEPTIDASE 29 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01591 Bva-Chr1 17257800 17259308 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01591 296 427 Calmodulin-binding Proteins AT2G22960 23.308 5.73e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01591 K09645 - gmx:100780822 598.971