Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01588 atgttGGATGGCGAAGTACCCACTAAAGGTGTCTTTGCAAATGCAAGTGCTGTAGCAGTGATTGGCAAAAATAAGCTTTGTGGGGGTATCTCAGAGTTACAACTACCACCATGCCCCATGAAAGctacgaaaaagaaaaagcaccAACATCATAAACTAGTAGTGGTGATAATTTGTGTGGTTGTTTTTCTGCTTCTATTGTCATCTATTCTTACCATCTATTgcctaagaaaaagaaacagaaaatcatCTTCCAATTCACCAACAATTGACTTGCTTTCAAAGGTGTCGTACCAAAGCCTATACCAAGCAACTGATGGGTTCTCACCCAGCAACTTGATAGGCACTGGAGGCTTTGGCTCTGTGTATAAGGGAAGGCTTGGGTCTGAAGAAGGAGTTGTTGCTATAAAGGTCCTTAACCTTCGAAGGACTGGAGCTGACAAGAGTTTCATTGCTGAATGTAATGCTCTTAGAAATATTCGACATAGAAATTTGGTCAAGATTTTAACATGTTGCTCCAGCATAGATTACAAGGGTCAAACATTCAAAGCTCTAGTTTTTGAGTACATGACAAATGGTTGTTTAGAGAATTGGTTGCATCATGGGATAGAAACTGCTGAGCATCAAAGAACATTGGATCTCCGTCAAAggttaaatattgttattgaCATAGCTTCTGCATTACATTATCTTCACATTGAATGTAAGCAACCCATTGTTCATTGCGACTTAAAGCCGAGCAATATCCTTCTTGATGATGATCTGGTTGCTCGTGTGGGTGATTTTGGATTGGCAAGACTTCTTTCAACTATTACCAGCCTCTCTAACACCAGCACAATTGGGATAAAGGGAACCATTGGCTATGCTCCTCCAGagtatGGAATGGGTTATGAGGTGTCAACAAAAGGTGATATGTACAGTTTTGGGATCCTCATGTTGGAAATATTAACCGGAAGAAGGCCCACGGAAGAAATGTTTAAAGAAGGCTACAATCTCCACAAACATGTGAGAGCTGCACTCCCGAACATTTTACAGATCATAGATCCAGTTCTACTGCCAAGAAAAATCGAACAGACAACAGCAGCAATAGAAGCAGATATAGACATGGAGAACCCAACTGATTTACATCCTAAAGCCAAGAATTGCTTTCTTTCACTATGTAAGATTGGACTTGCTTGTTCAGTGGAATTACCAAATGAAAGAATGAACATGGTGGATGTCACTATGGAGTTGAATCAAATCAAGAAAGCATTTCTTGATTGTGGGATCAATGGAGGCAGAGTACGCatata 1292 0.3831 MLDGEVPTKGVFANASAVAVIGKNKLCGGISELQLPPCPMKATKKKKHQHHKLVVVIICVVVFLLLLSSILTIYCLRKRNRKSSSNSPTIDLLSKVSYQSLYQATDGFSPSNLIGTGGFGSVYKGRLGSEEGVVAIKVLNLRRTGADKSFIAECNALRNIRHRNLVKILTCCSSIDYKGQTFKALVFEYMTNGCLENWLHHGIETAEHQRTLDLRQRLNIVIDIASALHYLHIECKQPIVHCDLKPSNILLDDDLVARVGDFGLARLLSTITSLSNTSTIGIKGTIGYAPPEYGMGYEVSTKGDMYSFGILMLEILTGRRPTEEMFKEGYNLHKHVRAALPNILQIIDPVLLPRKIEQTTAAIEADIDMENPTDLHPKAKNCFLSLCKIGLACSVELPNERMNMVDVTMELNQIKKAFLDCGINGGRVRI 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01588 430 SUPERFAMILY Protein kinase-like (PK-like) 81 411 IPR011009 -
Bva01g01588 430 PANTHER LRR RECEPTOR-LIKE KINASE 1 421 - -
Bva01g01588 430 Gene3D Transferase(Phosphotransferase) domain 1 190 420 - -
Bva01g01588 430 Gene3D Phosphorylase Kinase; domain 1 90 189 - -
Bva01g01588 430 SMART serkin_6 108 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g01588 430 ProSiteProfiles Protein kinase domain profile. 108 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g01588 430 Pfam Protein kinase domain 111 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g01588 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 239 251 IPR008271 GO:0004672|GO:0006468
Bva01g01588 430 PANTHER OS04G0122200 PROTEIN 1 421 - -
Bva01g01588 430 ProSitePatterns Protein kinases ATP-binding region signature. 114 137 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01588 Bva-Chr1 17249409 17251845 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01588 2 419 Receptor kinase-like Gene Family AT3G47570 46.528 4.80e-123 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Bva01g01588 Pkinase 2.7e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01588 - - gmx:100792724 506.138