Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01584 ATGAATTTCTCTAAACTTGCTTCCATGttatttccattttggttCATATGCCAAAACTTGATTCTTCTGTTCTCTTCAAACTTGATCTGCTTTCAGCCTAGTGGAATTGCTGCTACATTAGGAAACCAGACCGATCACTTGGCATTGCTCAAATTTAAGGCAACAATATCCAAGGATCCATATGGAACCCTTGGCTCTTGGAATAGTTCTTCCCACTTCTGCACTTGGAATGGAATCATATGCAGCCACCGACATGAAAGAGTTAGAGTGTTGAATCTACAAGGATATGGGTTGCATGGACTCATATCGCCACACCTTGGCAACCTCTCTTTTCTTAGAATTCTCAACCTGAACAACAGTTTCAATGGTGAGATCCCACGAGAATTAGGTCGTTTATTGCGGCTACAAGAACTCATGCTCGCCAACAACACCTTGGCAGGGAATATTCCTATCAACTTGACAAACTGCTCTCAACTCAAGGGCTTATACTTGGAAAGGAATGATCTTACTGGCAAGATACCCAAGGAGATTGACTCTTTAAGCAAGCTAGAAAGATTGTTTCTTTCAAGAAACATGTTGACAAGTCAAATCCCTAATTCCATAGGTAATCTTTCTTCACTTAGTATTCTTTTTGCGAATGGAAATAGCTTGGAAGGAAGTCCCCCAGAAGAAATAGGCCATATGAAAAACTTaacaactctaaaaatatCTGTCAACAAACTTTCCGGTCTTCAGTTTTTAGACTTGTCACAGAACAACTTTTCTGGGTCAATTCCACAAGTCCTGCAAGGTATCTCTACTCTAGAATACctgaatatttcttttaacgtGTCGGATGGCGAAGTGCCCACTAAAGGTGTCTTTGGAAATGCTAGTGCTGTAGCAGTGATAGGCAATAATAAGCTTTGTGGGGGTATCTCAGAGTTACAACTACCACCATGCCCCATGAAAGCTACGAAAAAGCAAAAACGCCAATATCATAAACTAGTAGTGGTGATAATTTGTGTGGTTGTTTTTCTGCTTCTATTGTCATCTATTCTTACCATCTATTGcctgagaaaaagaaacagaaaatcatCTTCCGATTCATCAACAATTGACTTGCTTTCAAAGGTGTCGTACCAAAGCCTATACCAAGCAACAGATGGGTTCTCACCCAGCAACTTGATAGGCACTGGAGGCTTTGGCTCTGTGTATAAGGGAAGGCTTGGGTCTGAAGAAGGAGTTGTTGCTATAAAGGTCCTTAACCTTCAAAGGACGGGAGCTGACAAAAGTTTCATTGCCGAATGTAATGCTCTTAGAAATATTCGACATAGAAATTTGGTCAAGATTTTAACATGTTGCTTTAGCATAGATTACAAGGGTCAAACATTCAAAGCTCTAGTTTTTGAGTACATGACAAATGGTTGTTTAGAGAATTGGTTGCATCATGGGATTGAAACTGCAGAGCATCCAAGAACATTGGATCTCTGTCAAAGGTTAAATGTTGTTATTGACATAGCTTCTGTATTACATTATCTTTACATTGAATGTAAGCCACCGATCTGTCATTGCGACTTAAAGCCGAGCAATATCCTTCTTGATGATGATATGATTGCTCGTGTGGGTGATTTTGGATTGGCAAGACTTCTTTCAACTATTACCAGCCTCTCTAACACCAGCACAATTGGGATAAAGGGAACCATTGGCTATGCTCCTCCAGagTATGGAATGGGTTCTGAGGTGTTAAGAGAAGGTGACATGTATAGTTTTGGGATTCTCATGTTAGAAATATTAACTGGAAGGAGACCCACAGAGGAAATGTTCAAAGAAGGTTATAATCTCCACAACCATGTGAGAACTGCACTTCCAGACAACCTTTCACAGATTATAGACCCAGCTCTACTGCCAAGAGAATTCCAACAGacaacaacagcagcaacGGAAGCAGAAATAGACTTGGAGAACCCGACACATTTACATCCTAATGTCAATAAGTGCCTGCTTTCACTATGTAGGATTGGACTTGCTTGTTCAGTGGAATCACCGAATGAAAGAATGAATGTGGTGGATGTCACAAAGGAATTGAATCTAATCAAGAAAGCCTTTCTTGCTGATGGGATCAATGGAGGCAGAGCACGCatata 2126 0.389 MNFSKLASMLFPFWFICQNLILLFSSNLICFQPSGIAATLGNQTDHLALLKFKATISKDPYGTLGSWNSSSHFCTWNGIICSHRHERVRVLNLQGYGLHGLISPHLGNLSFLRILNLNNSFNGEIPRELGRLLRLQELMLANNTLAGNIPINLTNCSQLKGLYLERNDLTGKIPKEIDSLSKLERLFLSRNMLTSQIPNSIGNLSSLSILFANGNSLEGSPPEEIGHMKNLTTLKISVNKLSGLQFLDLSQNNFSGSIPQVLQGISTLEYLNISFNVSDGEVPTKGVFGNASAVAVIGNNKLCGGISELQLPPCPMKATKKQKRQYHKLVVVIICVVVFLLLLSSILTIYCLRKRNRKSSSDSSTIDLLSKVSYQSLYQATDGFSPSNLIGTGGFGSVYKGRLGSEEGVVAIKVLNLQRTGADKSFIAECNALRNIRHRNLVKILTCCFSIDYKGQTFKALVFEYMTNGCLENWLHHGIETAEHPRTLDLCQRLNVVIDIASVLHYLYIECKPPICHCDLKPSNILLDDDMIARVGDFGLARLLSTITSLSNTSTIGIKGTIGYAPPEYGMGSEVLREGDMYSFGILMLEILTGRRPTEEMFKEGYNLHNHVRTALPDNLSQIIDPALLPREFQQTTTAATEAEIDLENPTHLHPNVNKCLLSLCRIGLACSVESPNERMNVVDVTKELNLIKKAFLADGINGGRARI 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01584 708 ProSitePatterns Protein kinases ATP-binding region signature. 390 413 IPR017441 GO:0005524
Bva01g01584 708 Pfam Leucine rich repeat 134 193 IPR001611 GO:0005515
Bva01g01584 708 ProSitePatterns Serine/Threonine protein kinases active-site signature. 515 527 IPR008271 GO:0004672|GO:0006468
Bva01g01584 708 PANTHER OS04G0122200 PROTEIN 241 699 - -
Bva01g01584 708 PANTHER OS04G0122200 PROTEIN 30 243 - -
Bva01g01584 708 SMART LRR_typ_2 132 156 IPR003591 -
Bva01g01584 708 SMART LRR_typ_2 241 264 IPR003591 -
Bva01g01584 708 SMART LRR_typ_2 180 204 IPR003591 -
Bva01g01584 708 Gene3D Ribonuclease Inhibitor 152 241 IPR032675 -
Bva01g01584 708 Gene3D Ribonuclease Inhibitor 44 151 IPR032675 -
Bva01g01584 708 PANTHER LRR RECEPTOR-LIKE KINASE 241 699 - -
Bva01g01584 708 PANTHER LRR RECEPTOR-LIKE KINASE 30 243 - -
Bva01g01584 708 Pfam Protein kinase domain 387 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g01584 708 SUPERFAMILY Protein kinase-like (PK-like) 357 689 IPR011009 -
Bva01g01584 708 Gene3D Phosphorylase Kinase; domain 1 365 465 - -
Bva01g01584 708 Gene3D Ribonuclease Inhibitor 242 310 IPR032675 -
Bva01g01584 708 Pfam Leucine rich repeat N-terminal domain 43 82 IPR013210 -
Bva01g01584 708 Gene3D Transferase(Phosphotransferase) domain 1 466 699 - -
Bva01g01584 708 SMART serkin_6 384 697 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g01584 708 ProSiteProfiles Protein kinase domain profile. 384 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g01584 708 SUPERFAMILY L domain-like 43 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01584 Bva-Chr1 17234631 17238134 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01584 88 697 Receptor kinase-like Gene Family AT3G47570 43.429 1.86e-157 479
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Bva01g01584 Pkinase 8.3e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01584 - - qsu:111984688 670.618