Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01544 atggcttcttcttcttcatttcccAAACATGTCTTCTTCTTGATCACTCTGCTACTGCTCATAGATGTCACAAGAAGTTCAAAGGCTACTGAGTCCCAGAGAGACacattcttcaaaaaaatcaaagtagaTATCTTCAATGATTTAGAAGGAGGATCAATCCTGACCCTCCATTGCAAGTCGAAGGACGATGATCTAGGGTTCCACACACTCCAATCTGGGCAAAGCTACCAGTTTACATTCCGTCCCAGATTCATTTTTGGGGATACACTTTTCTTCTGCGGCTTTGCATGGCCTGACGATCCATCTTTACACTACTTTGTTGTTTATCATGAGAGATACAATGACTGCATCTACTGTCCATGGAGAGTGCACAAGCAAAATATATGTGGACCTCGTGATCCAGTGCCTAATGATGATCCTTATATAGGTTGCTACCCTTATAATAAGAGTTTAGAGGAAGAGGCACCTCCTGCAGgtgtttg 485 0.3835 MASSSSFPKHVFFLITLLLLIDVTRSSKATESQRDTFFKKIKVDIFNDLEGGSILTLHCKSKDDDLGFHTLQSGQSYQFTFRPRFIFGDTLFFCGFAWPDDPSLHYFVVYHERYNDCIYCPWRVHKQNICGPRDPVPNDDPYIGCYPYNKSLEEEAPPAGV 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01544 161 Pfam Plant self-incompatibility protein S1 42 132 IPR010264 -
Bva01g01544 161 PANTHER - 28 131 IPR010264 -
Bva01g01544 161 PANTHER S-PROTEIN HOMOLOG 18-RELATED 28 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01544 Bva-Chr1 16895929 16896414 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01544 40 149 Carbohydrate Esterase AT3G16970 38.793 1.41e-19 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01544 - - cam:101497766 107.071