Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01542 ATGGAGGTTGTATTTGCAATTGCTGGAGTAGTAATAGACCGTACAGTGGCACCACTGGGGCGGCAATTGGGTTATATGTTTGGCTATAAAAGCAATGTTGAGGAGCTAAAGAGTAAGATTGAGAAGCTTGAGGATGAAAGAGGCAATGTAAAGGAATTAGTTGATGGTGCCAGGAGGAATGGGGAAGAAATTGCTGATGGTGTGAAGAAATGGCTGGAGAGAGTGCATATAGTTAGTGGAGAGAGGGCAAGGAAGATGGTGATGGCTATTGCTGAAATCCAAGCAGAAGGGAATTTCAAGAGGGTTTCCTATCGTGTGGTTGCACCGTGGATAGATGGTATCTCTCCTGCTGGTTATATGGCCTTTGAATCAAGAACATTAGTTTTGAATGAGGTAGATGTGGCACTGAGGGATCCTACAGTCAATATGGTTGGAGTATATGGGTTGGCTGGTGTAGGTAAAACCAATCTGGTCAAGGAAGTTGCCAGGAAAGCTCAAGAAGACAAGTTCTTTGATAGGGTGGTTATGGTTGTTGTAACACAAAATGTGGAGGCAGATAAAATTCAGAAAGAAATTGCTGAGATGCTGGGACTGAAATTTGATGAGGAAAGTGAACTCATAAGGGCAGGTCGTTTAAGCGACAGGTTTAAGCAGGAGAAGAATATTCTTGTAATTCTTGACTATCTCTGGGCATGGCTTGATTTGGGAAAAATTGGAATCCCCTTTGGCAATGATCACAAGGGGTGCAAGTTATTGCTGACTTCAAGAAACCAACAGGTATTGTCCCATCAAATGGATACTCAAAAGAGCTTTTTGATGGAAGTTTTGATTAAAGAAGAAGCTTGGAAGTTATTTAAGGAGATGGCTGGACTTGATGATTCCAATAGCAATACTGAGCTTTTATCTACAGCAGCTGAGGTTGCCAGAGAGTGTGCGGGACTGCCAGTTGCTATTGTTACTGTTGCTAGggctttaaagaaaaaaagtttatttgaaTGGAGGGATGCCTTGCGACAACTTAAGAGTCCTACTTCTAGGAACATTACAGGAATGAAGGAAGTTGTGGATTCCTCTATAAAGTTGAGTTATGATCATTTGGAAAGTGATGAGTTAAAGTCTACTTTCTTGCTTTGTGCCTTTATGGGACATGATGCCTCTACCTTCGACTTGTTGAAATACTGTGTTGGACTGGGATTATTCAAAGGCATCTTTGCAATAGATGAAGCTAGAGACAGAATGCAAACATTGTATCTCAGAATCAACAGGCCTTTACTGTGTGCTATAATGAACATTGAGAAGCAATTTCAAAATTGTGTTACTATGGCTTTAGATTACAGTGATATCCCGAAGCTTCCGGAAGTATTAGATTGTCCAAGACTGCAATTTTTTCGGATTTTTAGGAAGGATCCTTCTTTGCAAATAGCGGATGATTTCTTCGAAAGATTGGGTGAACTCAAAGTGTTAGATCTGACAGATATACATTTTTCGTCCCTTCCTTCTTCAATCACTGCCTTGAGAAATTTGTCAACATTGTGTCTAGACTGGTGTGTGCTGGAAGACATAGCTATAGTAGGAGAgctaaagaatttgaaaattcttagTTTCTTACGGTCTGACATCAAGCAATTGCCAGGTGAAATCAAGAACCTGACTCAACTTAAGTTGTTGGACTTGACCAATTGTTCAAAACTTGAGATTATTCCCCCAAATATCATTTCAAGCTTGACAAGTTTGGAAGAGTTGTATATGGGAAACAGCTTTGTTCGATGGCAAGATGAGAAATCTGACAGAGAAAGTAGTAATGCTAGTCTGGCAGAGCTGAGAAATTTGCCCTATTTAACAACTTTAGAAGTGTGTATCAGAGATGCTTCAATTTTTCCACAATACTCATTCTTTAAGAAGCTAAAAAGATATAGAATTTTGGTTGGGGATATATGGAGTTGGCCTGGTAAGTTCAAGAACTTAAGAACCCTAAAACTCAAGCTCTTCAGGGGCTTCCATTTTCAGCAAGGAGTCAAAATGCTGTTGAAAAGTGTTGAAGATTTGTACTTGGATGAATTAGCTGGTATAACAGATGTCCTTTACCAATTAAATGGGGAAGGATTTCCTGACCTGAAGCATCTTCACATCCAAAATAGTTCTCAACTTCTCTACATTGTCAACTCATTGGATCGTTCTGATCTTGTTAAAGTCTTCCCCAGGTTGGAGTCATTGGTCATGCAAAAGCTTAgtaaattggaaaaaatatgCCATGGACAGATTTCAGTTGCATCCTTTTCAGAATTAAAAGTTATCAAAGTCAAAGGCTGTAATTGTTTGAAGAATCTCTTCTCACTTTCCATGGCTGCGGGTCTCTCGAAGCTTGTTGAATTAGAAGTCTTTGAATGTAATTCAATGGAGGAGATCATTTTCttacaaaatgaagaaactagCACAGATTGTATCAATATTGTGTTTGGCAATTTACATTCTTTGAAACTCCAGAATTTGCCAGTGCTTAGTGATTTCCTGTCCAAGAAGAAGACATCTTCTGTTACTCAAGGGGAAGAGAAAGAACTGACAAATGATGTAGCTAGTGTACCTGGCAGttgcaatttccttttctgcgAGAAGAATCTGGAGACATTGTCGGTTGCTGATTGTAGTTCTCTGAGGAAGATATTTGAACTCAATGCTGAGGAGCTGCATGGCAATATTGATATGCGATTGAAAAAAAAGTTGGGAAGCATTTTTCCTGCCTCTTTAGCCAAAGGTCTGGCACAGCTCCAAAAGATCTATATAAGAGAATGTAACATAGACGAAATTGTTGCAAATGAGGAAAATGGGGAAGCAGTTGCTAGTTTTGTCTTCCCTCATGTAACCTCAGTGAAACTTCTATTTTTACCTAAGCTGAAGAGCTTCTACAAAGGGAAACACGTGTTAGAATGCCCACTGTTGCAGGAGCTAGAAGTGATCAGTTGTGACAAATTAGAATCTCTTGGTCAACCACATGATTTGGTCTCACAACCACTATTCTCCATTGGAAAGGTGATCACTAGCCTGGAAAGAATGACACTGAACAGCAAGGAAGTCATGAGGATATGGAATGGCCAGTTTCCTACAAATCTTTTCTGCAAGTTGAAATTTCTCCGGCTATGTCATTTTTATGATGAGCGTTCTAGTTTTCCATATTGGTTACTTCAGAGAATCCCTACTCTGGAAGAGCTATTTGTGGAATATAGTTCATTCAAAGAGATATTCCTTTCTGATAGGCTTATTCTTGAGGACAGACAAATTGGATCTGTTACGTATCTTCATAAGATATGGTTATGGGGATTGCACAAACTAGAGAATATATCCAAAGAAGGAGTAGATACTGTTCTTGAGAACCTAGAACATCTTTGTAAAGCAGAATGTTCCAATTTGCTGATATTAGCACCTTCTAAAGTTTCTTTTAATCGTTTGACTTATTTGGAAGTAAAGAAATGTGAGAGCTTGGTAAAACTTGTAACATCCTCAACAGCTAGGAGCTTGGCACAActgaaaacaatgaaaataaaggacTGCAAAAGGATAGAAGAAATAGTAGTAACCGATACccttgaagaagaaattgagtTCCGCATGTTGCAGATTTTGGAACTTGAGTGTTTACCAAACCTCTTGGATTTCTGCTCAAACAATTGTATGTTGAAATTTCCTTTCTTGGAACGACTGAGTGTCAAAGAATGCCTTAGGATGAAGATATTTTGTGTTGGGATAGTAAGCACACCAAAGCTGCAGAAAGTACTGGTGGAAGGAACAGAAGATGAATGGTATTGGGAGGGGAATCTGAATGCCACCATAAAAAAGCTCTTTAAGGACAAGGTGGACTCCTTCCCATCTTTGATTTTGCCAGAATTTCTCTACTTGGGCAATTACGCTTATGCCTCCCATTTTAATCTTCTGAATATTCTGGGAATCTCTTGTATCCTCAACACAGTACCTTCTTGTCCAAATCTCTACCTAAGCTCATTTACCTATCACAATCTCACAGTCTCTCATGACAAAGCTTTGCCATTTGATGAGGCAGTTCAGTTTCTGGAGCAATGGGAGAAGGATAAGAGTTACCAATGGGTGAAAGATCGAAGACCTTCAGTTAAATTTACTGAAGCTGTCTACTGGCAACTGCAGGAGTATGAGCGTAGCATGTATGGTTG 4178 0.383 MEVVFAIAGVVIDRTVAPLGRQLGYMFGYKSNVEELKSKIEKLEDERGNVKELVDGARRNGEEIADGVKKWLERVHIVSGERARKMVMAIAEIQAEGNFKRVSYRVVAPWIDGISPAGYMAFESRTLVLNEVDVALRDPTVNMVGVYGLAGVGKTNLVKEVARKAQEDKFFDRVVMVVVTQNVEADKIQKEIAEMLGLKFDEESELIRAGRLSDRFKQEKNILVILDYLWAWLDLGKIGIPFGNDHKGCKLLLTSRNQQVLSHQMDTQKSFLMEVLIKEEAWKLFKEMAGLDDSNSNTELLSTAAEVARECAGLPVAIVTVARALKKKSLFEWRDALRQLKSPTSRNITGMKEVVDSSIKLSYDHLESDELKSTFLLCAFMGHDASTFDLLKYCVGLGLFKGIFAIDEARDRMQTLYLRINRPLLCAIMNIEKQFQNCVTMALDYSDIPKLPEVLDCPRLQFFRIFRKDPSLQIADDFFERLGELKVLDLTDIHFSSLPSSITALRNLSTLCLDWCVLEDIAIVGELKNLKILSFLRSDIKQLPGEIKNLTQLKLLDLTNCSKLEIIPPNIISSLTSLEELYMGNSFVRWQDEKSDRESSNASLAELRNLPYLTTLEVCIRDASIFPQYSFFKKLKRYRILVGDIWSWPGKFKNLRTLKLKLFRGFHFQQGVKMLLKSVEDLYLDELAGITDVLYQLNGEGFPDLKHLHIQNSSQLLYIVNSLDRSDLVKVFPRLESLVMQKLSKLEKICHGQISVASFSELKVIKVKGCNCLKNLFSLSMAAGLSKLVELEVFECNSMEEIIFLQNEETSTDCINIVFGNLHSLKLQNLPVLSDFLSKKKTSSVTQGEEKELTNDVASVPGSCNFLFCEKNLETLSVADCSSLRKIFELNAEELHGNIDMRLKKKLGSIFPASLAKGLAQLQKIYIRECNIDEIVANEENGEAVASFVFPHVTSVKLLFLPKLKSFYKGKHVLECPLLQELEVISCDKLESLGQPHDLVSQPLFSIGKVITSLERMTLNSKEVMRIWNGQFPTNLFCKLKFLRLCHFYDERSSFPYWLLQRIPTLEELFVEYSSFKEIFLSDRLILEDRQIGSVTYLHKIWLWGLHKLENISKEGVDTVLENLEHLCKAECSNLLILAPSKVSFNRLTYLEVKKCESLVKLVTSSTARSLAQLKTMKIKDCKRIEEIVVTDTLEEEIEFRMLQILELECLPNLLDFCSNNCMLKFPFLERLSVKECLRMKIFCVGIVSTPKLQKVLVEGTEDEWYWEGNLNATIKKLFKDKVDSFPSLILPEFLYLGNYAYASHFNLLNILGISCILNTVPSCPNLYLSSFTYHNLTVSHDKALPFDEAVQFLEQWEKDKSYQWVKDRRPSVKFTEAVYWQLQEYERSMYG 1392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01542 1392 PANTHER PHOSPHATASE, PUTATIVE-RELATED 3 77 - -
Bva01g01542 1392 PANTHER PHOSPHATASE, PUTATIVE-RELATED 82 416 - -
Bva01g01542 1392 PANTHER PHOSPHATASE, PUTATIVE-RELATED 999 1260 - -
Bva01g01542 1392 Gene3D Ribonuclease Inhibitor 430 958 IPR032675 -
Bva01g01542 1392 Coils Coil 26 60 - -
Bva01g01542 1392 Pfam NB-ARC domain 138 364 IPR002182 GO:0043531
Bva01g01542 1392 SUPERFAMILY RNI-like 1007 1260 - -
Bva01g01542 1392 SUPERFAMILY L domain-like 431 827 - -
Bva01g01542 1392 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 115 378 IPR027417 -
Bva01g01542 1392 Gene3D - 276 366 IPR042197 -
Bva01g01542 1392 Gene3D - 111 274 IPR027417 -
Bva01g01542 1392 Gene3D Ribonuclease Inhibitor 998 1168 IPR032675 -
Bva01g01542 1392 PRINTS Disease resistance protein signature 216 230 - -
Bva01g01542 1392 PRINTS Disease resistance protein signature 311 325 - -
Bva01g01542 1392 PRINTS Disease resistance protein signature 143 158 - -
Bva01g01542 1392 PRINTS Disease resistance protein signature 548 564 - -
Bva01g01542 1392 PANTHER PHOSPHATASE, PUTATIVE-RELATED 434 925 - -
Bva01g01542 1392 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 1285 1390 IPR029021 -
Bva01g01542 1392 Gene3D Protein tyrosine phosphatase superfamily 1267 1362 IPR029021 -
Bva01g01542 1392 PANTHER - 3 77 - -
Bva01g01542 1392 PANTHER - 434 925 - -
Bva01g01542 1392 PANTHER - 82 416 - -
Bva01g01542 1392 PANTHER - 999 1260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01542 Bva-Chr1 16871978 16878049 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01542 1283 1376 Protein tyrosine phosphatase (PTP) family AT2G04550 45.238 4.88e-24 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01542 - - pvy:116119557 932.554