Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01535 ATGAGAACTCAACTTCTTCGTCTCTTCGTCTCCCTTCTCCTCTTCGCAGCTACATTCTTCCATCTCCACCCAACGGCCACCGCCACCGAAGGCCACGGAGGAGGCTACGCCGACAGCGACGCCATCGATTATATCCGCACAAGTTGCAACACAACTCTCTACCCAGACATctgcttctcttctctctctcccttcgCCAATGCCATCCAACAGAATCCCGGTAAGCTGGCTCGCGTCGCCATAACCGTGAGCCTCTCCCGGGCGCACGAAATGGCCTCCTACGTAAACAACCTCACTCGCGAAGCCGAGTACGGCGCCAACTCCCGAGCCTCCTCCGCCCTCCACGACTGCTTCTCCAACCTCGACGATGCCGTCCACGAAATCCGCGGCTCGCTCAAGCAGATGCGCCAGATAGGCGCCGCCGGCTCCGGCGGCGAGTCGTTCAGGTTCCAGATGAGCAACGTGCAGACGTGGATGAGCGCAGCGCTCACCGACGAGGAGACGTGTACGGACGGATTCGAGGACGTACCGGAGGATCCCGTGAAATCGGATGTATGTGATCGCGTCACCGGAGTAAAGAAATTCACTAGCAATGCGCTGGCGCTCGTGAATAACTATGCCAACAGAGGAATCCCATA 638 0.5611 MRTQLLRLFVSLLLFAATFFHLHPTATATEGHGGGYADSDAIDYIRTSCNTTLYPDICFSSLSPFANAIQQNPGKLARVAITVSLSRAHEMASYVNNLTREAEYGANSRASSALHDCFSNLDDAVHEIRGSLKQMRQIGAAGSGGESFRFQMSNVQTWMSAALTDEETCTDGFEDVPEDPVKSDVCDRVTGVKKFTSNALALVNNYANRGIP 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01535 212 PANTHER PECTINESTERASE INHIBITOR-LIKE 6 209 - -
Bva01g01535 212 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 43 206 IPR035513 -
Bva01g01535 212 SMART PMEI_2 40 202 IPR006501 GO:0004857
Bva01g01535 212 TIGRFAM PME_inhib: pectinesterase inhibitor domain 12 206 IPR006501 GO:0004857
Bva01g01535 212 CDD PMEI-like_3 47 208 - -
Bva01g01535 212 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 6 209 - -
Bva01g01535 212 Pfam Plant invertase/pectin methylesterase inhibitor 44 202 IPR006501 GO:0004857
Bva01g01535 212 Gene3D Invertase/pectin methylesterase inhibitor family protein 41 206 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01535 Bva-Chr1 16830872 16831774 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01535 45 211 Carbohydrate Esterase AT3G14310 23.810 2.79e-14 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01535 - - gmx:100812251 301.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01535 01 16830872 16831774 Bva01g01535 01 16830872 16831774 ECH