Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01464 ATGGAGGACCACAGTGATTCACTTATTCCTTCGAATATTGGTGCAAACATGTGTGAAAATTCACTTGCTCCATTAGACAATGGTGCGAATGACTGTGGAGGTCACAATACACCGATGAAATCTGGTCATGAACCCCATTGTTTAAATGAAAATCTTCTTATTCCCCCGCCAAAAATTGGAATGATGTTTGGTTCAGAGTACGAGGTGAGGTCGTATTGTACAAAATATGCCGGTCAACTAGGTTTTGGCATCATGACAAGAAACTCCAGAAAGAGACGTGATGGCAAGGTTGCTTATCTTATACTCTCCTGTTCTAAAGGAGGgaacagaagaagaagcagtaAAAGAAGTCCTATCAGAAATGTTGcatcaaagaaacaaaatagtgAAGCCCATATCAATGTATCAATATGTAAAGATGGAGGGTACCAGATCAAAACAGTTGTGCTGAAACACAATCATGATATGCAACCAACTAAAGACAATGTTAATTTTGACATCCGTGTTAAAAGGACATTAGACCTAGACGATCAAGCTGGTTTACGGATGAACGAGAGTTTCCGATCGCCTGTTGTTGAAGTTGGGGATTGTGATAACATGACATTTTGTGACAACAGTTGTGTccagaaacaaagaaaactaattGGGAAGGATGGAGATGGTGATGCCGTGCATAAGTACTTTGTGAGGATccaagaacaaaacaaaaactactTCTATGCCATTGCCATGGATGATTGCTTCCAAGTGCGGAATGTCTCTTGGGCAAATGCAAGAATTATAGCCGCATACAAATCATTTGGTGACGTAGTGACAGTTGACTGTACCTATCTCACTAACCAAAATGAAGTGCCTCTTGTAGCTTTTGTTGGGGTGAACCATCATGGGCAGTCTATTCTTTTTGGTTGTGGTTTGCTGTCGTGTGAGGAAACTGAGTCATTTGTTTGGTTGTTTCGATCATGGCTTCAGTGCATGTCTGGTGCTGCACCAAAAGGCATAATAACAGATCAATGCAGGGCCATGCAGAGTGCAATTGGAATGGTATTCCCTTTCACAAAGTATCGTTGGTGTTTATGGCGTATAATGAAAAAGCTACCTCAAAAATTACATGCGTATACCAGGTACAAGTCGATAAGTAATCATTTACAGTCTGCTATATATGCTACACTGAACACAAATGAATTTGAGAGCTATTGGAAGAAGACTATAGAGGAATTTGGACtacaaaacaatgaaagtGTCTATCACTCAACAGGTCAACCATCAGTAAAATA 1274 0.3744 MEDHSDSLIPSNIGANMCENSLAPLDNGANDCGGHNTPMKSGHEPHCLNENLLIPPPKIGMMFGSEYEVRSYCTKYAGQLGFGIMTRNSRKRRDGKVAYLILSCSKGGNRRRSSKRSPIRNVASKKQNSEAHINVSICKDGGYQIKTVVLKHNHDMQPTKDNVNFDIRVKRTLDLDDQAGLRMNESFRSPVVEVGDCDNMTFCDNSCVQKQRKLIGKDGDGDAVHKYFVRIQEQNKNYFYAIAMDDCFQVRNVSWANARIIAAYKSFGDVVTVDCTYLTNQNEVPLVAFVGVNHHGQSILFGCGLLSCEETESFVWLFRSWLQCMSGAAPKGIITDQCRAMQSAIGMVFPFTKYRWCLWRIMKKLPQKLHAYTRYKSISNHLQSAIYATLNTNEFESYWKKTIEEFGLQNNESVYHSTGQPSVK 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01464 424 PANTHER OS03G0843700 PROTEIN 53 414 - -
Bva01g01464 424 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 53 414 IPR031052 GO:0006355
Bva01g01464 424 MobiDBLite consensus disorder prediction 107 127 - -
Bva01g01464 424 Pfam MULE transposase domain 270 364 IPR018289 -
Bva01g01464 424 Pfam FAR1 DNA-binding domain 72 157 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01464 Bva-Chr1 16170572 16171846 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Bva01g01464 MULE 2.8e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01464 - K17604 gmx:102660547 354.369