Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01448 ATGGGGGCTTACAAGTACGTCTCAGAGCTTTGGCGTAAGAAGCAGTCTGATGTTTTGAGATTTTTGCAAAGAGTCAGATGTTGGGAGTACCGTCAGCAGCCATCCATTGTCCGATTGACAAGGCCCACCCGCCCTGATAAGGCACGTCGCATGGGTTACAAGGCAAAACAGGGTTATGTGGTCTACCGCGTCCGGGTTAGGAGAGGTGGCAGAAAAAGGCCAGTTTCAAAGGGTATTGTGTATGGGAAGCCCACAAATCAAGGTGTTACCCAGCTGAAATTTCAACGCAGCAAAAGGTCGGTTGCCGAGGAACGCGCTGGCCGGAAGTTGGGCGGATTGAGGGTCCTCAATTCCTACTGGGTGAATGAGGACTCTACTTACAAGTACTATGAGGTAATCCTGGTGGACGTTGCTCACTCTGCAATCCGCAATGACCCAAGAATCAATTGGCTCTGCAATGCTGTCCACAAGCACAGGGAACTCCGAGGCCTCACTTCTGCCGGTAAGAAAAACAGGGGATTAGTTGGAAGGGGACATCTCTACCACAAAGCTCGTCCATCTCGCAGAGCAACCTGGAAGAGAAACAACACCATTTCCCTTCGTCGCTACCGCTA 614 0.5114 MGAYKYVSELWRKKQSDVLRFLQRVRCWEYRQQPSIVRLTRPTRPDKARRMGYKAKQGYVVYRVRVRRGGRKRPVSKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWVNEDSTYKYYEVILVDVAHSAIRNDPRINWLCNAVHKHRELRGLTSAGKKNRGLVGRGHLYHKARPSRRATWKRNNTISLRRYR 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01448 204 Pfam Ribosomal L15 2 190 IPR000439 GO:0003735|GO:0005840|GO:0006412
Bva01g01448 204 PANTHER RIBOSOMAL PROTEIN L15 1 204 - -
Bva01g01448 204 PANTHER RIBOSOMAL PROTEIN L15 1 204 IPR000439 GO:0003735|GO:0005840|GO:0006412
Bva01g01448 204 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 1 195 IPR012678 GO:0003735|GO:0005840|GO:0006412
Bva01g01448 204 Gene3D Ribosomal protein l15e 1 204 IPR024794 GO:0003735|GO:0005840
Bva01g01448 204 SMART Ribosomal_L15e_2 2 193 IPR000439 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01448 Bva-Chr1 16000828 16003239 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01448 1 204 Cytoplasmic Ribosomal Protein Gene Family AT4G17390 89.706 1.54e-124 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01448 K02877 - thj:104806668 382.874