Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01444 ATGAAgcattcaaaattgaaatgcaTTATGACGATTATTCTTTTCAAATGTGGGTATAATAGAGGCTTACAAGTATGTCTCAGAGTTTGGCGTAAGAAGCAGTCTGGTGTTTTGAGATTTTTGCAAAGAGTCAGATGTTGGGAGTGCCGTCAGCAGCCATCCACTGTCCGATTGACAAGGCCCACCCGCCCTGGTAAGGCACGTCGCCTGGGTTACAAGGCAAAGCAGGTAAAGTA 236 0.4237 MKHSKLKCIMTIILFKCGYNRGLQVCLRVWRKKQSGVLRFLQRVRCWECRQQPSTVRLTRPTRPGKARRLGYKAKQVK 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01444 78 Pfam Ribosomal L15 28 76 IPR000439 GO:0003735|GO:0005840|GO:0006412
Bva01g01444 78 MobiDBLite consensus disorder prediction 62 78 - -
Bva01g01444 78 PANTHER RIBOSOMAL PROTEIN L15 27 76 IPR000439 GO:0003735|GO:0005840|GO:0006412
Bva01g01444 78 PANTHER RIBOSOMAL PROTEIN L15 27 76 - -
Bva01g01444 78 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 28 76 IPR012678 GO:0003735|GO:0005840|GO:0006412
Bva01g01444 78 MobiDBLite consensus disorder prediction 58 78 - -
Bva01g01444 78 Gene3D Ribosomal protein l15e 23 78 IPR024794 GO:0003735|GO:0005840
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01444 Bva-Chr1 15973520 15973756 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01444 29 76 Cytoplasmic Ribosomal Protein Gene Family AT4G16720 85.417 1.83e-23 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01444 K02877 - thj:104806668 90.8929