Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01428 atggagaaacCCCAACTGGGTTTTGGGGTTTCTGTCATTTTTCGTTTTGTTTTAGTGTTTTCTCTAGTTCTATCGGCTTCTTCCGGCGATGCCGAGGTGATGAACAATCTCAGGAAGATGATCAGAGCCCCGCCAAATTTAGGCTGGTCAGACCCCGATTTCTGCGAATGGCAAAACATCAAATGCAATTCCGATAAGCGTGTAACATCGATAAATATTGCAAAAAGTAATCTCGCAGGGTCACTTCCGGAAAATCTCGTTAATCTTTCAGAGCTGAAAGCTCTCCAGTGCTTTGACAACAAGCTCACTGGGCCGTTCCCAAAACTTGCCCCTTCTGTAAAGACACTAACCATTTACAACAATGGCTTCAGTTCCATACCCAGTGATTTCTTCGAGGGGATGTCTATGTTAGAAGAAGTGAGAATTGGCGCGAATCCCTTTTCTGCATGGCGAATACCAGATAGTCTCAAGGACTGTACATCACTCCGGGTATTAGAAGCACAAAATTGCAGTATCATTGGGTCAATTCCTGATATCTTTGGCCCTGATAACCCTTTACCAGCTTTGGTTAATTTGACCTTGTCTTATAATCTTCTTGAAGGTGGATTTCCTGCAAGCTTCGCTGGCACTGGGTTAGAGTTTCTTCTGCTGAATGATCAAAAGAGCACCAATAAACTCAATGGTACACTTGGGGTTTtgcagaaaatgaaatctttGAAGCAAATTTGGGTACATGGGAATCAATTTACAGGCCCAATTCCAGATTTTTCAAAGCATGATCAACTGTTTGATGTGAATCTAAGAGATAATCAGTTGACAGGTGTTGTTCCATCTTCTTTGACGAGTCTAAAGAGTCTTCGGACTGTTAAATTGTCAAACAATCGCCTTCAAGGATCCCCTCCTGTGTTCCCTCCTGGAGTTCAGGTGGATATGACTGGGCTTAATCAATTTTGCACAAACATGCCAGGTCAGCCGTGTAGTGCCCTTGTGAATGCTATGTTGTCTGTTGCTGAGCCTTTGGGTTACCCTTTAAAATTTGCAGAGAGTTGGAAGGGTAATGATCCGTGTAGTGGAAGCTGGACTGGGATAGTTTGCAGTAACAAAAACATTTCAGTTATCAACTTTCAGAGGATGGGTCTATCTGGAACTATTTCTCCCAGCTTTTCCAGCCTTACATCTGTCGTAAAATTGCTTCTTGCTGATAATAATCTTGGGGGTACCATACCAAGAGAGCTAACAAGTATGCCTAATCTGGTAGAGCTAGATGTTTCCAATAATAACCTGTATGGTAAGGTACCAACTTTTAGACAAGGCGTGTCTGTTGAATATACTGGGAATAAAGATATAGGGAAAGATAGACCAAGTTCCCCTTCTGGCTTAGTTGCTGGAGGCAAAGGACTTGGTGTTGGACCAATTGTTGGCATTGTAGTGGCTATTGTCGTTTTGCTTGGTGTAGGAGCTGCGGCATTCATAATGTTTcgtagaaagagaaaagattcAAGCTTTACACAGAAGCCAAATGGAAAAACAGAATTTAGTAGGGACTCAGATGCTACAAGGATAACTGTTTCTGGGGGTGGTGGACCTTATGCAGCTAATGATTCTTATGTGGGCGATGCTAGTAATATGGTAATCACCATTCAAGTTCTGAGAGAAGTTACCAACAATTTCAGCGAACAAAACATACTGGGGAAGGGCGGTTTTGGCAGTGTGTACAAGGGAGAGTTGCATGATGGAACAAAGATTGCAGTGAAAAGAATGGAATCAGGAATGGTGGGTGAGAAGTGGCTGAATGAATTCATGGCTGAAATTGCAGTTCTAACTAAGGTTCGACACCGGCATTTGGTTGCACTCTTGGGTTACTGCTTGGATGGGAATGAGAGGCTTCTGGTGTATGAATACATGCCTCAAGGAACTCTGAATGACCATTTGTTCAACTGGAAAGTGAAAGGGTTTAAACCACTGGAATGGAAGAGAAGGCTTTCCATTGCCTTGGATGTTGCAAGAGGTGTTGAGTATCTTCATAATTTAGCCCAACAGATTTTTATTCATAGGGATCTTAAGCCATCCAACATTCTGCTTGGAGATGATATGCATGCTAAAGTGGCAGATTTTGGACTAGTCCGTCTTGTTCCAGAAGGAAATGCCTCATTTGAGACTAGAATTGCTGGAACTTTTGGATATCTGGCACCTGAGTATGCTACAACTGGACGAGTCACAACAAAGGTTGATGTATTCAGTTTCGGAGTTGTTCTCATGGAGATGATATCTGGAAGAAAAGCACTCGACAACAGCCAATCCGAAGAGAACGTCCATCTTGTTTCATGGTTCCGCAGAGTCCTAATTAACAAGGATATTCAAAATGCCATTGATCCAACAATTGTACTTGATGAAGAAACCTACTCCAGCATCTGCGTTGTAGCTGAACTAGCAGGCCATTGCTGCACAAGAGAGCCCCACAATCGTCCAGACATGAGTCATGCAGTGAATGTGCTATTGCCCCTTGTTGAGGTATGGAAACCCACTGAAGCTGAACGTGAAGATGACAATTATGGATTCGACCCTGACCTGTCCTTGCCACAAGCCCTTGAAAGATGGCAAGCTATGGATGGAAGGAGCAACGTGTATACAAATACTGCTTCTTTATCATATCCTACAAGTGAAGACAGTATAAATACTAATACAGAGATAAGCACACCCCCTCGCCCACCCGGACTCGCAGATAGCCTTTCTTCTAGAGATGGACGGTG 2750 0.4251 MEKPQLGFGVSVIFRFVLVFSLVLSASSGDAEVMNNLRKMIRAPPNLGWSDPDFCEWQNIKCNSDKRVTSINIAKSNLAGSLPENLVNLSELKALQCFDNKLTGPFPKLAPSVKTLTIYNNGFSSIPSDFFEGMSMLEEVRIGANPFSAWRIPDSLKDCTSLRVLEAQNCSIIGSIPDIFGPDNPLPALVNLTLSYNLLEGGFPASFAGTGLEFLLLNDQKSTNKLNGTLGVLQKMKSLKQIWVHGNQFTGPIPDFSKHDQLFDVNLRDNQLTGVVPSSLTSLKSLRTVKLSNNRLQGSPPVFPPGVQVDMTGLNQFCTNMPGQPCSALVNAMLSVAEPLGYPLKFAESWKGNDPCSGSWTGIVCSNKNISVINFQRMGLSGTISPSFSSLTSVVKLLLADNNLGGTIPRELTSMPNLVELDVSNNNLYGKVPTFRQGVSVEYTGNKDIGKDRPSSPSGLVAGGKGLGVGPIVGIVVAIVVLLGVGAAAFIMFRRKRKDSSFTQKPNGKTEFSRDSDATRITVSGGGGPYAANDSYVGDASNMVITIQVLREVTNNFSEQNILGKGGFGSVYKGELHDGTKIAVKRMESGMVGEKWLNEFMAEIAVLTKVRHRHLVALLGYCLDGNERLLVYEYMPQGTLNDHLFNWKVKGFKPLEWKRRLSIALDVARGVEYLHNLAQQIFIHRDLKPSNILLGDDMHAKVADFGLVRLVPEGNASFETRIAGTFGYLAPEYATTGRVTTKVDVFSFGVVLMEMISGRKALDNSQSEENVHLVSWFRRVLINKDIQNAIDPTIVLDEETYSSICVVAELAGHCCTREPHNRPDMSHAVNVLLPLVEVWKPTEAEREDDNYGFDPDLSLPQALERWQAMDGRSNVYTNTASLSYPTSEDSINTNTEISTPPRPPGLADSLSSRDGR 916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01428 916 SUPERFAMILY L domain-like 41 436 - -
Bva01g01428 916 MobiDBLite consensus disorder prediction 501 524 - -
Bva01g01428 916 PANTHER TRANSFERASE, PROTEIN KINASE RLK-PELLE-LRR-IX FAMILY-RELATED 9 916 - -
Bva01g01428 916 MobiDBLite consensus disorder prediction 880 900 - -
Bva01g01428 916 Pfam Protein kinase domain 558 830 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g01428 916 ProSitePatterns Serine/Threonine protein kinases active-site signature. 682 694 IPR008271 GO:0004672|GO:0006468
Bva01g01428 916 MobiDBLite consensus disorder prediction 501 516 - -
Bva01g01428 916 CDD STKc_IRAK 563 835 - -
Bva01g01428 916 Gene3D Transferase(Phosphotransferase) domain 1 635 853 - -
Bva01g01428 916 Gene3D Ribonuclease Inhibitor 328 453 IPR032675 -
Bva01g01428 916 ProSiteProfiles Protein kinase domain profile. 557 836 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g01428 916 ProSitePatterns Protein kinases ATP-binding region signature. 563 585 IPR017441 GO:0005524
Bva01g01428 916 Gene3D Ribonuclease Inhibitor 27 321 IPR032675 -
Bva01g01428 916 Gene3D Phosphorylase Kinase; domain 1 531 634 - -
Bva01g01428 916 MobiDBLite consensus disorder prediction 880 916 - -
Bva01g01428 916 PANTHER OSJNBA0070M12.3 PROTEIN 9 916 - -
Bva01g01428 916 Pfam Leucine rich repeat N-terminal domain 333 366 IPR013210 -
Bva01g01428 916 Pfam Leucine rich repeat N-terminal domain 29 63 IPR013210 -
Bva01g01428 916 SMART serkin_6 557 836 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g01428 916 SUPERFAMILY Protein kinase-like (PK-like) 538 832 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01428 Bva-Chr1 15778282 15782683 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01428 78 838 Receptor kinase-like Gene Family AT5G07280 31.000 6.47e-85 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Bva01g01428 Pkinase 5.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01428 - K00924 gmx:100776064 1091.26