Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01426 ATGAAGtTCAACATTGCCAATCCTACCACTGGGTGCCAGAAGAAGCTTGAAATTGACGATGATGCAAAACTCCGAGCCTTTTGGGACAAGAGGATCTCACAAGAAGTCATTGGAGATGCACTGGGAGAGGAATTCAAGGGCTATGTGTTTAAAATTACTGGAGGCTGTGACAAACAGGGTTTTCCAATGAAGCAGGGAGTTTTGACTCCTGGCCGAGTTCGTCTTTTGCTGCACAGAGGAACTCCCTGCTTCCGTGGTTATGGTAGGAGGAATGGAGAGAGGAGAAGAAAGTCTGTTCGCGGTTGCATCGTCAGTCCAGACCTCTCTGTTCTTAACTTGGTCATTGTGAAGAAAGGCGAGCAAGATCTTCCTGGACTGACTGACATTGAGAAACCAAGAATGAGGGGACCAAAAAGGGCTTCCAAGATTAGGAAGTTGTTTAATCTTTCCAAGGATGACGATGTGCGCAAATATGTCAACACATATCGCAGAAATTTTACGACCAAGAATGGGAAGAAGGTCAGCAAAGCTCCCAAAATTCAGAGGTTGGTTACCCCCTTGACTTTACAAAGGAAGAGGGCTAGCATTGCAGAtaagaagaagagaattgCCAAGGCCAAGTCAGAGGCTGCTGAATACCAAAAGCTCCTTGCTTCCCGCTTGAAGGAGCAGCGTGAACGCCGAAGCGAAAGCTTAGCAAAGAGGAGATCCAAGCTTTCTGCTGCATCTAAGCCATCAGTCTCTGCTTA 749 0.4593 MKFNIANPTTGCQKKLEIDDDAKLRAFWDKRISQEVIGDALGEEFKGYVFKITGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGEQDLPGLTDIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRNFTTKNGKKVSKAPKIQRLVTPLTLQRKRASIADKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSAASKPSVSA 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01426 249 MobiDBLite consensus disorder prediction 220 249 - -
Bva01g01426 249 PANTHER 40S RIBOSOMAL PROTEIN S6 1 249 - -
Bva01g01426 249 Gene3D - 133 234 - -
Bva01g01426 249 Coils Coil 189 216 - -
Bva01g01426 249 PANTHER 40S RIBOSOMAL PROTEIN S6 1 249 IPR001377 GO:0003735|GO:0005840|GO:0006412
Bva01g01426 249 Pfam Ribosomal protein S6e 1 128 IPR001377 GO:0003735|GO:0005840|GO:0006412
Bva01g01426 249 ProSitePatterns Ribosomal protein S6e signature. 52 63 IPR018282 GO:0003735|GO:0005840|GO:0006412
Bva01g01426 249 PIRSF RPS6e 1 249 IPR014401 GO:0003735|GO:0005840|GO:0006412
Bva01g01426 249 MobiDBLite consensus disorder prediction 220 237 - -
Bva01g01426 249 SMART Ribosomal_S6e_2 1 128 IPR001377 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01426 Bva-Chr1 15765739 15768328 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01426 1 249 Cytoplasmic Ribosomal Protein Gene Family AT5G10360 70.683 1.60e-117 332