Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01415 ATGATCAATTTGGAAGTAAGACTTTACAGAACCAGATATATTGGAGTATCTTGGGATGTTGAGTCCCTTGTGGAGAATTTACTCAGTGAACTTGCTGGTAACCAATCAATTCTTGTGCATGTGTTTGACGTCACAAACTCTACTGGTCCTTTGATTATGTATGGAAATCCATATGAAGAGGGCGATACGACTCTTGAGCACAAAAGTAAGCTTGATTTTGGGGATCCCTACAGGAACCATCTGATGCTATGCAGGTATCATCAGAAGGCTCCGACACCAAGGACAGCACTTACTGCGGCATTCCAATTCTTTGTGATTTGTTTATTAGAgggttatattttttatcgtGGTACAGTTCATATTGTCAAAGCTGAGGATGATTTCCGTGAACTGCAAGAGCTCAAGGTCCGAGCAGAAGCAGCTGATGTTGCCAAATCCCAGTTTCTAGCTACTGTCTCTCATGAAATCAGAACACCCATGGATAGCATCCTAGGTATGCTTGCTCTGCTTCTAGACACAGGGTTGAATTCAATCCAAAGAAATTATGCTCAGACTGCTCAAGCGTGTGGAAAGGCACAGATGGTACTCTTAAATGAAGTGCTTGACCGAGCTAAAGTTGAAGCTGGCAAGTTAGAGCTTGAAACATTTCCATTTGACATACGTTCCATACTTGATGACATCCCTTCATTGTTTTCTGAGGAGTGTAGACACAAAGGCCTAGAGCTGGCAGTTTTTGTTTCTGATAAAGTTCCAGATATTGTTATGGGGGATCCTGGGAAGTTCAgacaaataataacaaatctTGTTGGTAACTCTGTTAAATTCACTAAACGAGGACACATATTTCTTAATGTCTTTCTtgatgaaaatagaaagacaACAATGAATGGAAAATCTCAAACTTTTCTAAATGGAGGATCAGACGAAGTCATGCATGTGTTTGGTGGTTATCAGTACAAAACTCTGAGTGGATGTGAAGCACCTGATGAGCGGAATAGCTGGGATAATTTTCAGCATCTGATTGCGGGtgaagaattttgttttgatactTACAGCAAAAAAGCTACTTCTACTGAAGATTCTGAACAAGTAACTTTGGTTGTCTGTGTGGAGGACACTGGAATTGGGACTCCTTTATTTGACCAGCACAGGATTTTCATGCCTTTTGTGCAGGCAGACAGCTCGATAGGTCGAAAATATGGCGGAACTGGTATTGGCTTAAGCATTTGTAAGTCTTTGGTTGAACTAATGGGTGGTCAGATAAATTTCGTAAGCCGACCCCAGGTTGGAAGCACATTTTCATTCTCTGCTGTTTTTGGGACGATTAAGAAAAGTTTGGTCAGTCATgcaaaaaaacttattttgggAAAGCTGCCTTCTGGTTTTAGAGGAATGAAAGCTGTGGTAGTTGATGGAAACCCTGTTAGAGCTGCTGTGACTATATACCATTTGAGGAGACTAGGGATAATTGTTAAAGTGACAAATAGCATCAATAAGACTGTTGCTTTATGTGGACAAAATGGTTCTCTGACATCTGGAATGTTCCAGCctgatattattttggttgagAAGGATTCATGGCTTTCTGGAGACAATGCAGGCTTCAATATATCACTAATGGACTGGAAACAGAATGGGCATATGTGGAAGTTGCCCAAAATGATTCTTCTTGCAACCAATATCAGTAATGCTGAATTTGATAAAGCTAAGGCTTCAGGTTTTGCTGATACTGTCATAATGAAACCTTTGAGATCTAGCATGTTGGCTAATTGTCTTCAGCAAGTTCTGGGGATGGGGAAGAAGAGGCAGCTAGGAAAAAACATGCCTATTGATTCCACTTATCTACAAAACCTTCTCTgtggaatgaaaattttggtagTTGATGACAATGCGGCAAGCCAAAAGGTCGCTGCAAGTGCATTGAAAAAGTTTAGAGCTGATGTAAAGTGTGCTGAAAGTGGCAAAGCTGCTCTAGAAATGCTTCAATTGCCTCATGACTTTGATGCTTGCTTAATGGATATTCAAATGTCAGAAATGGATGGgTTTGAAGCAACTCACCGTATCCGGCGGATGGAGAGCGAGGTGAATGGGCAGACCAATGGTGGCACTGTTGATGGAAATGTCAAGAAAGTTGAGTGGCATTTGCCAATATTAGCCATTACAGCTGATGTAATTCAAACTACATATGATGAATGCCTCAAATGTGGGATGGATGGGTATGTCTCAAAGCCTTTTGACGAAGAAAATTTCTATCAAGAAGTTGCCAAATTATTCGAGTCCAACCCCGTCTCAGACTCATG 2300 0.39 MINLEVRLYRTRYIGVSWDVESLVENLLSELAGNQSILVHVFDVTNSTGPLIMYGNPYEEGDTTLEHKSKLDFGDPYRNHLMLCRYHQKAPTPRTALTAAFQFFVICLLEGYIFYRGTVHIVKAEDDFRELQELKVRAEAADVAKSQFLATVSHEIRTPMDSILGMLALLLDTGLNSIQRNYAQTAQACGKAQMVLLNEVLDRAKVEAGKLELETFPFDIRSILDDIPSLFSEECRHKGLELAVFVSDKVPDIVMGDPGKFRQIITNLVGNSVKFTKRGHIFLNVFLDENRKTTMNGKSQTFLNGGSDEVMHVFGGYQYKTLSGCEAPDERNSWDNFQHLIAGEEFCFDTYSKKATSTEDSEQVTLVVCVEDTGIGTPLFDQHRIFMPFVQADSSIGRKYGGTGIGLSICKSLVELMGGQINFVSRPQVGSTFSFSAVFGTIKKSLVSHAKKLILGKLPSGFRGMKAVVVDGNPVRAAVTIYHLRRLGIIVKVTNSINKTVALCGQNGSLTSGMFQPDIILVEKDSWLSGDNAGFNISLMDWKQNGHMWKLPKMILLATNISNAEFDKAKASGFADTVIMKPLRSSMLANCLQQVLGMGKKRQLGKNMPIDSTYLQNLLCGMKILVVDDNAASQKVAASALKKFRADVKCAESGKAALEMLQLPHDFDACLMDIQMSEMDGFEATHRIRRMESEVNGQTNGGTVDGNVKKVEWHLPILAITADVIQTTYDECLKCGMDGYVSKPFDEENFYQEVAKLFESNPVSDS 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01415 766 Coils Coil 194 214 - -
Bva01g01415 766 Gene3D CHASE domain 10 90 IPR042240 -
Bva01g01415 766 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 256 437 IPR003594 -
Bva01g01415 766 Pfam His Kinase A (phospho-acceptor) domain 144 209 IPR003661 GO:0000155|GO:0007165
Bva01g01415 766 Pfam Response regulator receiver domain 624 754 IPR001789 GO:0000160
Bva01g01415 766 Gene3D - 460 600 - -
Bva01g01415 766 Gene3D - 617 763 - -
Bva01g01415 766 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 198 435 IPR036890 -
Bva01g01415 766 CDD REC_hyHK_CKI1_RcsC-like 624 754 - -
Bva01g01415 766 ProSiteProfiles Histidine kinase domain profile. 151 441 IPR005467 -
Bva01g01415 766 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 129 210 IPR036097 GO:0000155|GO:0007165
Bva01g01415 766 ProSiteProfiles Response regulatory domain profile. 466 596 IPR001789 GO:0000160
Bva01g01415 766 PRINTS Bacterial sensor protein C-terminal signature 401 419 IPR004358 GO:0016310|GO:0016772
Bva01g01415 766 PRINTS Bacterial sensor protein C-terminal signature 425 438 IPR004358 GO:0016310|GO:0016772
Bva01g01415 766 PRINTS Bacterial sensor protein C-terminal signature 366 380 IPR004358 GO:0016310|GO:0016772
Bva01g01415 766 PRINTS Bacterial sensor protein C-terminal signature 384 394 IPR004358 GO:0016310|GO:0016772
Bva01g01415 766 SUPERFAMILY CheY-like 462 597 IPR011006 -
Bva01g01415 766 Gene3D - 120 207 - -
Bva01g01415 766 Coils Coil 121 141 - -
Bva01g01415 766 SMART HisKA_10 144 209 IPR003661 GO:0000155|GO:0007165
Bva01g01415 766 SMART HKATPase_4 256 441 IPR003594 -
Bva01g01415 766 PANTHER TWO-COMPONENT HISTIDINE KINASE 12 762 - -
Bva01g01415 766 ProSiteProfiles Response regulatory domain profile. 623 758 IPR001789 GO:0000160
Bva01g01415 766 PANTHER HISTIDINE KINASE 4 12 762 - -
Bva01g01415 766 CDD HATPase_EvgS-ArcB-TorS-like 261 439 - -
Bva01g01415 766 SMART REC_2 622 754 IPR001789 GO:0000160
Bva01g01415 766 Gene3D - 208 442 IPR036890 -
Bva01g01415 766 CDD HisKA 144 205 IPR003661 GO:0000155|GO:0007165
Bva01g01415 766 SUPERFAMILY CheY-like 621 758 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01415 Bva-Chr1 15658425 15663332 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01415 13 766 Histidine Kinase Gene Family AT2G01830 61.447 0.0 915
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bva01g01415 HATPase_c 2e-27 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01415 K14489 - gmx:100813204 1070.07