Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01385 atgATTTTTCCATTGAAACTCATCATCAAAACTGGAAAGGAGTGGAACAAGAAATCCACTTCCATTAGGCAGAGAAAACATAGTACTCTTTCAGTTGAAGGCTATGCAAGTGCCGGAAACCGcagttcttcttcttcttcttcttcggcTTGCAAAGGTAACTTTGTGATTTATACTGCAGATCAGAAGCGCTTTGTGATACCATTAGAGTATCTGTGCAATGGAATCTTCCTAGAGCTCTTCAAAATGtctgaagaaaaatatggacACTCAAGCGAAGCGCCTATAAAGTTGCCTTGTGATGCAGTGTTTATGGAGTATGCTATCTTGCTCATCCAAAGAGGTGTAGCCAAAGGTTTAGAGAAAGCTTTGTTGAGTTCCATCAATGGAGATAGTTGTTCCTTGTCAGCCTCGTTCATAAGAGGGCATCCCAGCCAACAGTTGCTTATTTGCTGCTCCCAAAATAGGATGTATTGGCATTA 482 0.3714 MIFPLKLIIKTGKEWNKKSTSIRQRKHSTLSVEGYASAGNRSSSSSSSSACKGNFVIYTADQKRFVIPLEYLCNGIFLELFKMSEEKYGHSSEAPIKLPCDAVFMEYAILLIQRGVAKGLEKALLSSINGDSCSLSASFIRGHPSQQLLICCSQNRMYWH 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01385 160 Pfam Auxin responsive protein 24 111 IPR003676 GO:0009733
Bva01g01385 160 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR66-LIKE 2 152 - -
Bva01g01385 160 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 2 152 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01385 Bva-Chr1 15194813 15195295 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01385 43 109 Calmodulin-binding Proteins AT5G20810 27.941 9.78e-07 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01385 - - hbr:110660219 138.272