Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01380 ATGATTTTTCCATTGAAACTCATCATCAAAACTGGAAAGAAGAGGAACAAGAAATCCACTTCCATTAGGCAGAGAAGACATAGTACTCTTTCAGTTGAAGGCTATGCAAGTGCCGGAAACCGcagttcttcttcttcttcttctttggctTGCAAAGGTAACTTTGTGATTTATACTGCAGATCAGAAGCGCTTTGTGATACCATTAGAGTATCTATGCAATGGAATTTTCCTAGAGCTCTTCAAAATGTCTGAAGAAGAATATGGACACTCAAGCGAAGTGCCTATAAAGTTGCCTTGTGATGCAGTGTTTATGGAGTATGCTATCTTGCTCATCCAAAGAGGTGTAGATATAGGTTTAGAGAAAGCTTTGTTGAGTTCCATCAATGGTGATAGTTGTTCCTTGTCAGCCTCGTTCATAAGAGGGCATCCCAGCCAACAATTGCTCATTTGCTGCTCACAAAATAGGATGTATTGGCATTA 482 0.3755 MIFPLKLIIKTGKKRNKKSTSIRQRRHSTLSVEGYASAGNRSSSSSSSLACKGNFVIYTADQKRFVIPLEYLCNGIFLELFKMSEEEYGHSSEVPIKLPCDAVFMEYAILLIQRGVDIGLEKALLSSINGDSCSLSASFIRGHPSQQLLICCSQNRMYWH 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01380 160 Pfam Auxin responsive protein 24 111 IPR003676 GO:0009733
Bva01g01380 160 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 6 151 IPR003676 GO:0009733
Bva01g01380 160 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR66-LIKE 6 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01380 Bva-Chr1 15168321 15168803 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01380 15 149 Calmodulin-binding Proteins AT4G34750 24.444 6.83e-07 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01380 - - vvi:100253733 130.954