Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01307 ATGTTCTTCTCTCTATCATCTACTCCAACCATGCCCATTTGCCTCCCCAGGTGGAACGAATTCAGAGAGTGTAGCGGAAGCAGCCATGGCAGAGAAGAGAATCGATTCACAATGTCCGATTATCCTGAATGCTACGCTTGTACCCAAGTGGGTGTCCCCGCGTTCCACTCCTCCCGCTGCGACACCACCCGCCAGCGGCCCCACCTGGAAGCCGCCGCCGGGTCATCATTGATGCCGATCACGACTGGACCCGAATCCAATGCGTATTCGGGTCGTGCAaatgggaagaagaagaagcggGGGTTCGGGTTCAGTTTCGGGCAGGTGCTGGATCCTCGAAGCAGGTACGTGCAGAGGTGGAATCGGGCGGTGCTGCTGGCACGTGCGACGGCGTTGGCGGTTGACCCGTTGTTCTTCTACGTTGTGACGCTGAGTGGGAATGGGTTCCCCTGCTTCTACATGGACCGGGTTCTGGCCGTGGTTGTAACGGTTTTTCGTACGTGCGTAGATCTGGTGCACGTGTGCCACCTCTGGCTTCAGTTCAGGTTGGCCTACGTGTCCAGTGAGTCCTTGGTGGTTGGATGTGGGAAGCTCGTGTGGGACCCACGTGCCATAGCAATGCACAACCTGCGATCACTCAACAAGTTCTGGTTGGATGCTTTCGTCATACTCCCTATCCCTCAGGTTATCATTTGGTTTGTAGTACCTAAACTGCTGGAAGGAGAGAGAATTAAGCAGACGATGACAATACTTCTAGTAGGATACTTATTTCAATCTCTGCCAAACTTCTATCACAGCATCTATCTCATGAGAAGGCTTAAAAAAGTCACAGGTTACATCTTTGGAAGCGTTTGGTGGCGCTTCAACCTCAACGTCCTTGCCTACTTAATTGTCTCTCATGTTGCTGGAGGATGCTGGTATATTCTTGCAATGCGGCGGTTGGTGACATGCATTCAGCAGCAATGTGATCGACGCATGAACTGTAATCTTCCATTGTTTTGCTCGAAGGGAAACAATCCGAGTGGTGTAAACTTGACGAGCATAGAATCATACTGTTTGGAAGTTGATGGACCATTCAATTATGGAATCTATACTCCAGCACTCCTGATTTTTGCAAGCAATTCTCTGGCTGTCAAAATCCTCTATCCAATCTTTTGGGGCTTATTGAACCTCAGCTCTTTCGGCAATGAGCTTGTCCCTACGAGTCACTGGTTGGAAGTGTTATTCAGCATATGCATTACTCTTGGAGGCTTAGCTCTTTTTGTCACATTAATTGGGAATATTCagATATGTCTGCATGCTGTGATGGCAAGCAAGAAAAGGATGCAGATCCGTTGTCGTGATTTGGAATGGTGGATGAAGCGCAGACAATTACCCTCTCATCTGAGACAAAGGGTTCGAAACTTTGAGCGTCAAAACTGGATGTCAATGGGAGGACAAGATGAGATGCAGTTGATTCAGGATTTGCCTGATGGCCTTCGCAAGGATATTAAGCGCTATCTTTGCATAGACCTAATAAGAAAGGTACCTATCTTTCAAATGTTGGACGATATTATCCTTGATAATATTTGTGATATGCTTAGGCCCGTTGTATACTCTCAAGGTGAAAAGATAATTAGAGAAGGAGATTGCGTGCTAAAGATGGTGTTTATACTTCACGGCCGTGTACAACGTAGCCAAGGACTTACCAAAGGCTTTGTTGCCACCAGTGTCCTTGAACCAGGTTGCTTCTTCGGCGACGAGCTACTCCTATGGTGTCTTCGTCTACCTTCCTCCGACAGACTCCCTGCTTCGTCTGCAACATTTTCTTGCATCGACCCTTTGGAAGCATACGGTCTTGATGCATATCATTTGAGGTATATCACTTGCCATTTTCGTTATAAGTTCAACCAATGGAGCCTTAAGCACATGATAAGATATTATTCCTCGAATTGGCGAACTTGGGGAGCCGTAGTCATTCAATTAGCTTGGCGACGCTATAGGATCAGAACGAAAGGTGAAATTACTCATGCCATGCAAAATGGAGGGAATGAAAATCCACAGCTAAAGAAGTTTGTTACAATGTTTTTATCATTAAGGCCTAATGATCACCTTGAATG 2099 0.465 MFFSLSSTPTMPICLPRWNEFRECSGSSHGREENRFTMSDYPECYACTQVGVPAFHSSRCDTTRQRPHLEAAAGSSLMPITTGPESNAYSGRANGKKKKRGFGFSFGQVLDPRSRYVQRWNRAVLLARATALAVDPLFFYVVTLSGNGFPCFYMDRVLAVVVTVFRTCVDLVHVCHLWLQFRLAYVSSESLVVGCGKLVWDPRAIAMHNLRSLNKFWLDAFVILPIPQVIIWFVVPKLLEGERIKQTMTILLVGYLFQSLPNFYHSIYLMRRLKKVTGYIFGSVWWRFNLNVLAYLIVSHVAGGCWYILAMRRLVTCIQQQCDRRMNCNLPLFCSKGNNPSGVNLTSIESYCLEVDGPFNYGIYTPALLIFASNSLAVKILYPIFWGLLNLSSFGNELVPTSHWLEVLFSICITLGGLALFVTLIGNIQICLHAVMASKKRMQIRCRDLEWWMKRRQLPSHLRQRVRNFERQNWMSMGGQDEMQLIQDLPDGLRKDIKRYLCIDLIRKVPIFQMLDDIILDNICDMLRPVVYSQGEKIIREGDCVLKMVFILHGRVQRSQGLTKGFVATSVLEPGCFFGDELLLWCLRLPSSDRLPASSATFSCIDPLEAYGLDAYHLRYITCHFRYKFNQWSLKHMIRYYSSNWRTWGAVVIQLAWRRYRIRTKGEITHAMQNGGNENPQLKKFVTMFLSLRPNDHLE 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01307 699 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 2-LIKE 39 699 - -
Bva01g01307 699 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 39 699 - -
Bva01g01307 699 SUPERFAMILY cAMP-binding domain-like 439 621 IPR018490 -
Bva01g01307 699 SUPERFAMILY Voltage-gated potassium channels 111 431 - -
Bva01g01307 699 ProSiteProfiles cAMP/cGMP binding motif profile. 511 621 IPR000595 -
Bva01g01307 699 CDD CAP_ED 511 621 IPR000595 -
Bva01g01307 699 Gene3D Helix hairpin bin 437 502 - -
Bva01g01307 699 SMART cnmp_10 511 629 IPR000595 -
Bva01g01307 699 Gene3D Jelly Rolls 509 627 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01307 Bva-Chr1 14183550 14189069 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01307 43 699 Ion Channels AT5G15410 60.588 0.0 790
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01307 K05391 - cpap:110820129 895.96