Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01292 ATGGGTAGTTGTGGAAGGGAAGGATCAGTGAGGCAGTACGTAAGATCGAAGATGCCTCGTTTGAGATGGACACCTGAACTACATCGCTGCTTTGTTCAAGCCATTGAAAGCCTTGGAGGTCATCACAAGGCTACCCCTAAGCTTGTTCTTCAGTCAATGAATGTCAAAGGGTTAACTATCTCACACGTTAAGAGCCATCTTCAGATGTACAGAAGCATGAGAGGTGACTTGGGCAGACAAGATAGGAATTCCACCCAACATAGAAAATTACAATCTTTTGATGAGGAACATGATGATGGGTGTGTTGATGAAGTGAATGATGTTGGTGTTCATCCTTCAAAATCCAATGCAAGAGAATCTGATTCTCACTTCAGCAACAGTGATTTCTCCCCAAAAAGAGCTAGAATCGAGACGACGAGTTCAATCTCAGAGGCTCTGCAATGCAGCCGCAGAATATGTGAAGCGGTTTCAAATCCGTACTCCTTTTGTGATTATGTGCAGGCCATGGCTGAGCATAAGGGAATAAAGGAGCTTTGTGGTGGTTCAAGGTGGCAGAATCAACCCCCTTCACGAGTCTTCAATCTGATGCCAGATTTTGGCAACTTCAGCTCATTCAAATGTCCAAAGCAAGAATCTGATTTCTTTCAGGTTACCAAGTTAGATAGTCAAAAACACAGTTTACAGCCAATGAATGAAGTTGAGAGCACAAGGACAGCAGCAGCACATGGagaagataaagaagaagaagaagaagaaagagggtGTGAGTTGTCATTGTCACTCTCATTGCCCAATCCTTCTTCTTCAGCAAGTGAGAATAGTGAAGCAATCTCTTCTTCCTTCCCTGCAGGGTTTCATAGCTATAAGGATTGCTCTAGTTCTTCTTCCTCTGATAAAGATAATAGAATTAACCTAGACCTATCTATAGCCCTATGTGGCAATTG 944 0.4153 MGSCGREGSVRQYVRSKMPRLRWTPELHRCFVQAIESLGGHHKATPKLVLQSMNVKGLTISHVKSHLQMYRSMRGDLGRQDRNSTQHRKLQSFDEEHDDGCVDEVNDVGVHPSKSNARESDSHFSNSDFSPKRARIETTSSISEALQCSRRICEAVSNPYSFCDYVQAMAEHKGIKELCGGSRWQNQPPSRVFNLMPDFGNFSSFKCPKQESDFFQVTKLDSQKHSLQPMNEVESTRTAAAHGEDKEEEEEERGCELSLSLSLPNPSSSASENSEAISSSFPAGFHSYKDCSSSSSSDKDNRINLDLSIALCGN 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01292 314 MobiDBLite consensus disorder prediction 238 256 - -
Bva01g01292 314 SUPERFAMILY Homeodomain-like 17 72 IPR009057 -
Bva01g01292 314 MobiDBLite consensus disorder prediction 260 276 - -
Bva01g01292 314 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 1 314 - -
Bva01g01292 314 MobiDBLite consensus disorder prediction 112 131 - -
Bva01g01292 314 Pfam Myb-like DNA-binding domain 21 71 IPR001005 -
Bva01g01292 314 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 75 IPR017930 -
Bva01g01292 314 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 19 72 IPR006447 GO:0003677
Bva01g01292 314 MobiDBLite consensus disorder prediction 225 276 - -
Bva01g01292 314 Gene3D - 18 74 - -
Bva01g01292 314 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 1 314 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01292 Bva-Chr1 13975830 13980930 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01292 1 77 G2-like Transcription Factor Family AT1G14600 69.512 2.20e-32 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bva01g01292 Myb_DNA-binding 3.6e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01292 - - jre:108997116 337.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01292 01 13975830 13980930 Bva01g01292 01 13975830 13980930 ECH