Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01277 ATGGCTGGTGAAAGGGATGGTATCATTGGCCTCACCAGATCCATTGACGTGCCTAGTTCCAGCGCAGGGGCCGTAATTTACAAGAACCCCATCACATTCTTCGACCCAGAAACCAATACCACTACTTCCTTCTCCGCAAAGTTCACATTCTCCATTAGAAACGTGAACCCGAGCTCGTTCTGTGATGGGTTAAcgttctttctctctcctagTAACCGGACTCTAGGGTCCCCTGGTGGCTATCTGGGTCTCGTCAATTCCTCCCAGTTAACTCGCAACAAGTTCGTAGCGGTTGAATTCGATACCCGACTGGATCCTCGCTTCAATGACCCGAATGAGAACCATGTCGGGTTGGACATCGATAGCATGAATTCGATCAATACCGCGGATCTGATCTTGCAGGGGATTGATCTCAAGAGTGGGAATTTGATCAATGCTTGGATTGATTACAAGAATGAGCAGAGGAAGCTCATGGTTTTCTTGAGTTATTCTAGTTTGAAGCCTGAGAAACCCATTCTCAGCGTTGATATTAACCTATCTGATTATTTCAAGAGGATTATGTATGTGGGATTTTCAGCTTCTACTGAGGGAAGCACTGAGCTTCaccaaattgaaaattggAGCTTTCAGACTGTTGGGTTTATTCCGGCAAGACCAAAATCGCGTCTTGAGTATCTTCAGTGTGGAATGGCAACTGAGAAGACTGATGTTTTCAGTTATGGAGTTGTTGTACTTGAAGTTGCTTATGGAAGAAGGTCAATCGAAAGAGAAGGCCAAAAAATGGTTAACTTGGCTGATTGGGTTTGGGGGCTGCACTCTGAAGGGAAGATCATTGAAGCAGCAGACAAAAAGTTGAAAGGTGAGTTTAAAGAGGAAGAGATGAGGAAACTGTTACTCTTGGGTTTGAGCTGTGCAAACCCAGATAGTTCAGAGAGGCCTTCAATGAGAAGAGTCCTGCAGATTCTCAACAATGAAGTAGCATCTcttgcaaatttcaaattggctttcttttttagaTCTACTACAGGATGCATTTTTATATTGGCGTTTGGTAAGAAATGTAAAACGAGATTACTGAAAACTACGATTAATATGTGTTTagatcttattatttttataagaaatatagataataaaatgta 1142 0.3958 MAGERDGIIGLTRSIDVPSSSAGAVIYKNPITFFDPETNTTTSFSAKFTFSIRNVNPSSFCDGLTFFLSPSNRTLGSPGGYLGLVNSSQLTRNKFVAVEFDTRLDPRFNDPNENHVGLDIDSMNSINTADLILQGIDLKSGNLINAWIDYKNEQRKLMVFLSYSSLKPEKPILSVDINLSDYFKRIMYVGFSASTEGSTELHQIENWSFQTVGFIPARPKSRLEYLQCGMATEKTDVFSYGVVVLEVAYGRRSIEREGQKMVNLADWVWGLHSEGKIIEAADKKLKGEFKEEEMRKLLLLGLSCANPDSSERPSMRRVLQILNNEVASLANFKLAFFFRSTTGCIFILAFGKKCKTRLLKTTINMCLDLIIFIRNIDNKM 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01277 380 Gene3D - 2 163 - -
Bva01g01277 380 Pfam Legume lectin domain 6 220 IPR001220 GO:0030246
Bva01g01277 380 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.1 6 212 - -
Bva01g01277 380 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.1 224 326 - -
Bva01g01277 380 PANTHER - 6 212 - -
Bva01g01277 380 PANTHER - 224 326 - -
Bva01g01277 380 Gene3D Transferase(Phosphotransferase) domain 1 164 335 - -
Bva01g01277 380 SUPERFAMILY Protein kinase-like (PK-like) 224 333 IPR011009 -
Bva01g01277 380 CDD lectin_legume_LecRK_Arcelin_ConA 6 213 IPR001220 GO:0030246
Bva01g01277 380 ProSitePatterns Legume lectins beta-chain signature. 96 102 IPR019825 -
Bva01g01277 380 SUPERFAMILY Concanavalin A-like lectins/glucanases 5 222 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01277 Bva-Chr1 13652817 13658678 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01277 139 326 Receptor kinase-like Gene Family AT5G55830 47.959 8.82e-47 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Bva01g01277 Lectin_legB 4.9e-62 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01277 - - jre:108985395 330.487