Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01271 ATGGAGTTTCTTTCTCTAGCTGTTGGCAAGTTATTGGATTCCACAGTGGCACCACTAGCAAGGCAGATGGGCTACATGATTTCCTACAGCAGTAACGTTAAGGAGCTGAAGAAGGAAGCTGAAGCACTCCGGCATACAAGGGAACATGTACAACATAGAGTTGATGCTGCCCTAAGGAATGGGGAAATGATTGAAGAAGATGTTCGCAAGTGGCTAGAAGAAGTAGATGATATCGCTCTAAAGGCCCACGAGCTCAATAACGAtgaacgtcatgcaaagacaGGCTGGTCTAGCAGATCCTTTCCAAATATGCGCTCCAGGAATAAGCTTAGCAGACAttcaaagaagatgaaggaggAAATAGAGCAAATCAAGTTGAGGGGtaattttaatgaagtttCTTATCGAGATGTTCCCAAATTCACAGCGCTCTCTTCCTCAATCATAGATAGCACTCAACTTGCCTCAAGGGTGTCATTACAAAATGACCTTATGAGGGCACTGGAAAACCCTAATGTACAAACCATTGGGGTGCACGGTTTGCCCGGTGTGGGTAAGACCACTCTAGTCAAAGAGGTTGCGGAGAAAGTTCAGAAAGACAAGTTATTTGATGCGGTCATCTTTGCAAATGTCACACAGGATCCAGATCTTGGAAAAATCCAACAACAAATTGCTGACATGTTGGGGCTCAAATTTGAAGAACAAACCTTAATTGTGAGAGCAGAACGGCTACGAAATAGATTAAGTTTGAACCAACAAGCACTTCTCATAATTTTGGATGATCTTTGGGAAGAGCTCAATATGGACGAGGTGGGCATCCCTTCTGTAGAGCAACACaagcatttgaaaattttaatgactTCAAGAAGTCGAGAGGTGTTATCTGACCAAATGTATGCACAAAAGAACTTTTTGTTACCAGTGTTGCCAAAGAGGGAAGCATGGAAGTTATTTATGGATAAGGCCCATTTTGAGGAGTCTGCAGTAAGTGATGAATTTCGGTTGATAGCCGAACATGTTACTGAAGAGTGTGCAGGGCTGCCAATTGCTATTGTGGCCATTGCAAGTGCATTGAGAAACAAGAGTTTGTTAGAGTGGAAGGATGTCTTGAGACAACTTCAAAATCTTGCTTCAGCAAATATTACAGGTACGCAAGATAGAATGTACAAATCAATCGAGGTGAGTTATGAGAAGTTAGAAAATGATCTCTTGAAGTCAATTTTCTTACTTTGTGGAGTAATGCGATCCCATTCTCTGGTTATGGATTTGTTCACCAATTCTATTGGCCTAGGTTTGTTCCAGGACATCTATAATATGGAAGAGGCACAAAATAGTCTTCATATAAGCATTCGTAAACTAAAAGACTCATGTTTATTGCTAGATAGTTATTCTAGTAAGCGTTTTAACATGCATGATGTTGTCAGAGATACGGCCATACGCCTAGCATCTAGGCAACAAAATCTATTcataaaaagatatgaaaagtTAGAAGAATGGCCTGAAAGAGATCAAATGATAGATTGCAGaacaattattttagattGTTGTGACATTGATGAGCTTCCCCAAGGGCTATATTTTCGAAAACTCATCTTTTTTCATCTACACAATAGCAAACCTAATTGGGACGTCACAGACAGCATGTTCACAGGAATGGGCGAGTTGAAAGTATTGAATTTGACTGGAGAGCCAGTCAATTCTTTGCCTTCTTCAATCAGTCTCTTAAGCAACCTTCGCACCTTGTGTCTTGATGTGATTGGAGATATAGGGATAATTGGAGAGTTGAAGGGTTTGAAAGTTCTCACTCTCAGCTCTGATATGTTGCAATTGCCATCACAACTGAGCCAGTTAACGCATCTGAAACTGCTGGACTTGAGGGGCTGCTACAATCTTGTATTGATCCCACCTAATATCTTATCTAGGTTGACAAAATTACAGGAGCTCTATATGGCTACTCATATTTACTCAAATCCTATTGAGTGGTATGTGGATGATCCCAACTACGAGCAAGAGAGTATGAGATATGTCAGTCCTTCTGAATATAGAGAACCTATCCCAAACAACGTGCGAACTAGGGCAAGTCTAGCTGAGCTGAAAAATTTGGCTCACTTGACCTCGTTAGAATTACGTATTCACAACGTAAAAATGTTGCCAAAGGACACGGTATTTGATAGGTTACGAAGGTTCAAACTAATCATAGGAAGAACGGAACCAAACTTGTCATCTGAGTATGAAGCATCAAGGATATTGGAACTTGACCTTGGTACCAGCATTCATTCATGGGATAATGTCAAAAGGTTGCTAGACCACGTGGATGATTTACATTTGTACAATTTGGCAGGTGCTGAAAATGTTGTTCCtggaacaaataaaaaaggcaTGCCAAAACTAAGATATCTTCATCTTCAGTTCATTGATGAAATCCAGACCATAGTTGACTCATCATGGTGCAATCATGCTATTGATATTTTCCCCAATTTGGAGTCCTTGGTTATCAATTGTGCCGGGaacatgaaaaaattatgcaatggCCCATTGACAAGAGGATCCTTTTCAAGATTAAAAGTTATCAACGTGGCTAACTGTAATCAAGTGAAAACCCTCTTCTCAGTTTCCACCATTAGAGGTCCTCCACAAAGCAGTCTTAGAACAGAGACAATTTCTGACAATGAAAATGCCGCGAGCGTCCTCCAGTTTGCCAAGCTACAAACTATCATTCTGAAAGACCTGCCTCAACTAATTAGTTTCTGGGAAGAACACAAGACATCATCAACTGATATGGATGCAAAAGTGGTCACAGGGGACAATATTGCTCACACTCCCATTTCACTTTTCACTGAGAAGGTTACGCTCCCAAACTTGGAGGAGATTGTTATTAGCAACGTTCTTAAGTTGAACACAATATGGCATTTGCAGCAACAACTTCGTCCAAATTCATTTGATAATCTAAGAAAGCTTCAGATTGAAAATTGTCCGGGAATCAGGACCATCTTTCCATCTGCCATTGGGAGTAGCATGCACAATCTTGAGacattgtttattaaaaattgtgaatCTCTAGAGCATGTATTTGATCTCCAAGTACTATATGATAAAGAAGTACACAGCGGGATAAGTGGTTTATCAAGGATGTTCAGCTTTCCAAATTTGCAGCAGGTTTATGTTGAAAGGTGTGAGAagctaaaatatttgtttccaAGATATGTGGCAAGAACTCTTGACAAACTCCAAAGgcttaaaatagagaaatgttCGTTGATGGAAgagataataacaaaaaaagacaattCAAATCCTTCTTCCACTGAAGAGGTTCTGTACTCCAATTTGGAGGAATTGATTATCATCGACATGGATAAGTTGAATGCAATATGGAAATCTCAAGAAGCACTTTCTCTAAATTCCTTTAGCAAACTCAAGAAGATTGAGGCCAGAGACTGTCCAGAACTCATTTTTCTATGTCAGATATTGAGCAACACTCAGAGTCTTGAGGCgttgataattgataattgtaaATATCTACAACTGATATATGGAGACACAATCCCTGGGACTAGTACTCCGCATATGCATGCCGGTGGATTTGAACGGCTACGCTTTTTGTTTTCAGCATCTGTGGTAAAATGTCTTGACAAACTTCGAAAccttgaaataagaaaatgctCACTGATGGAAGGGATGACAAAGATTGAAGACGATACACCTTCCGGCATGGTTATGTTCCCCAACTTGGAGGAAATGATTATCATTGATGTGGATAATTTGAATGCAATATGCCACTGGCAGCAATTACTATCTCCAGATTCTTTTGGTAAACTCAAGAAGATTGAAACCAGAAACTGCCCAGAACTCATTTTTCCATGTCAGATACTGAGCAACACGGAGATTCTTGAGACATTGATAATTAATGATTGCAAATATCTAAAACAGATATCTGGAGACTTAATCCCTGAGACTAGTAATTCGCAGATGAATGTCAGAGGAAGTGATTGGCCAAGAGTTTTGTTTCCAGCATCTCTGACGAAAAATATGTACAAACTCCAAAACCTTGACATACGAAATTGTTCAATGGTGGAAGAGATCATAACCATTCAAGAAAATGCAGCTCCTTTTGTTGAAAAGGTTATTTTCCCTAACTTGGAGGAAGTTATTATCATTGACGTGGATAAGTTGAATGCAATATGGCATTGGCAGAATGCACTTCCTCCAAATTCTTTTGGCAAACTCAAGAAGATTGAGATCAGAAACTGCCCAGAACTCATTTTTCCATCTCAGATGTTGAGCAACACTCTGAGTCTCGAGACATTGAAGATTAACAATTGTAAATATCTACAACAGATATCTGGAGACATAATCCCTGAGACTAGCAATTCGCAAATGCATGTTGGTGGAAGTGAAAGGCTACACGTTTTGCTTCCAACATCTGTTGCAAAAAATCTTTACAAACTCCAGAtccttgaaataaaaaaatgttcaatGGTGGAAGTGATAATAATGACAGAAATCAATACTCCCCCACCTGTTTCCGAAAAGGTTGATATATTCCCTAACTTGGAGGAGATGGTCATTGTGGATGTAGACATGTTGAATATGATAGTAGATTCGAAGCAACAACTTTCTTCGAATTCCTTTGAtagacttaaaaaaattgagattagAAATTGTCCAGAACTCACGTCAATATTGCCATGTTACAAGAGGAGCACAATTCAAAATCTTGAGACATTCACCATTATTGACTGTAAATCTCTGCTAGAAATATTCCCTCTCCCAGGAACAAATACTAGAGAGACATGTGGTCGGACTGTAAACTGCACAGAAAATTTGCATAACCTTGCAGATTTGCCAGCTGCAATGCATGTTGAAGGATGTGAAAggctaaaatatttgtttcctCCATCTGCAGAAGAAGGACTTGGGAAATTCCAGAAGATTGTAATAGAGAAATGCTCTGTGATGGAAGAGATAGTAATGGTAGAAGAAAGCAGCCACTGTTCTTTACTCGAAGAGGTAAAATGGCAAAGCCATAAATCACTTTGTAATTTGAGATCTCTAAGGATAGCAAACTGTGAAAATTTTTCCAAGGTACTACCATTCAATGTCCTGAAATCCTTAATTGTCTTGGAAGAGCTGGAAATCCAAAATTGCCAATCAGCAGAAGTGGTGTTTGATTTGGAAGGAATAAACactgaaaaagtaaataacaTGCAAGGAATTCGGCTGGAAAAACTGATATTGGAGTCCCTACCAAAGCTCAAACATGTCTGGAGTAAGACCCCGGAAGAGGTTGTCACCTTTCATGAACTAAAAGTTCTTCGAGCTTGTGGGTGTCCATGTCTGACAAGTCTGTTCCCAGCCAATATaggaaaaagtttaaaaaaacttaaagaaTTAACCATCAGTGATTGTGGGTTAGAAGAAATAGTGGAAAAGGAGGAAGGGCAAACACtgtcaattaattttcagttCAGAAAACTGCACTCTTTGGAAATCTCAGATGTACCCAAGCTCAAGAGTTTCTATCCAGGAGAATATACTACATATTGGCCAGCAGTGAAGAGGATCCATGTTTGTATTCCTAGCGAAGTGAGTGTGTTTGGCACAAAACTATTCAAGAAACATCAGAAGCACAATCTCGATATCTCAAATCAGCAGCCGATCTTCCTGGTCGAAAGGATAAACACTGACTTGGAAGAATTGGCATTGAACAGGGTGGACATGCCATTGGGATTTCTTGCCATATTCCCCCAGCTAAGAAATCTCTGTATACAATTCATTGATGATGATCATGCCAATTTTCCATATCAGTGGCTTGAAAGCATAGCTAATTTGAGGAAACTAACAGTGAAATCTAGTTCCTTTAAAGAGATATTCCCAAGTGAAAATTCCGAAGAACAAATAGGCAATGATGTGCAGCTTAATGAGTTATCATTGCAGTTCCTTTCTCAGCTAGAGTGCATATGCAAGGAAGGCTATGTAGCAGAGACAATTCTAAGTGTGCTGGGATCTTTATATGTGGTGGAATGTCATTGTTTGAAAAATCTAGTGCCTTCATCAGTATGTTTCAGTCATTTGACACATTTGGAAGTGCATAAATGTGTGGGGCTCTTCTATCTGGTGACATCAACAACAGCAAAGAGTCTCATTAAACTCAGAACATTGAAGATAACTGAATGCGCAATGATAAAGGAAATAGTAGCCGATGATGTTGACAATGCTGAACAGGAGATAGTGTTTGCTGACTTGGAATTACTGGAACTTCGTATGTTATCAAGCTTGGGAAGCTTTTGTTTGAAGAATCACACTTTCAAATTCCCCTCATTGAATAAATTAGTTGTAAGTGAATGCCCTCAGATGAAAATGTTCTGCCTCGGGGACTTAACAACACCATTGTTGGCTAGAGTACTTATGACAATGGATGATGAAGGGCGCTGGGAGGGTGACCTGAACACAACCATAAAGTA 6464 0.3765 MEFLSLAVGKLLDSTVAPLARQMGYMISYSSNVKELKKEAEALRHTREHVQHRVDAALRNGEMIEEDVRKWLEEVDDIALKAHELNNDERHAKTGWSSRSFPNMRSRNKLSRHSKKMKEEIEQIKLRGNFNEVSYRDVPKFTALSSSIIDSTQLASRVSLQNDLMRALENPNVQTIGVHGLPGVGKTTLVKEVAEKVQKDKLFDAVIFANVTQDPDLGKIQQQIADMLGLKFEEQTLIVRAERLRNRLSLNQQALLIILDDLWEELNMDEVGIPSVEQHKHLKILMTSRSREVLSDQMYAQKNFLLPVLPKREAWKLFMDKAHFEESAVSDEFRLIAEHVTEECAGLPIAIVAIASALRNKSLLEWKDVLRQLQNLASANITGTQDRMYKSIEVSYEKLENDLLKSIFLLCGVMRSHSLVMDLFTNSIGLGLFQDIYNMEEAQNSLHISIRKLKDSCLLLDSYSSKRFNMHDVVRDTAIRLASRQQNLFIKRYEKLEEWPERDQMIDCRTIILDCCDIDELPQGLYFRKLIFFHLHNSKPNWDVTDSMFTGMGELKVLNLTGEPVNSLPSSISLLSNLRTLCLDVIGDIGIIGELKGLKVLTLSSDMLQLPSQLSQLTHLKLLDLRGCYNLVLIPPNILSRLTKLQELYMATHIYSNPIEWYVDDPNYEQESMRYVSPSEYREPIPNNVRTRASLAELKNLAHLTSLELRIHNVKMLPKDTVFDRLRRFKLIIGRTEPNLSSEYEASRILELDLGTSIHSWDNVKRLLDHVDDLHLYNLAGAENVVPGTNKKGMPKLRYLHLQFIDEIQTIVDSSWCNHAIDIFPNLESLVINCAGNMKKLCNGPLTRGSFSRLKVINVANCNQVKTLFSVSTIRGPPQSSLRTETISDNENAASVLQFAKLQTIILKDLPQLISFWEEHKTSSTDMDAKVVTGDNIAHTPISLFTEKVTLPNLEEIVISNVLKLNTIWHLQQQLRPNSFDNLRKLQIENCPGIRTIFPSAIGSSMHNLETLFIKNCESLEHVFDLQVLYDKEVHSGISGLSRMFSFPNLQQVYVERCEKLKYLFPRYVARTLDKLQRLKIEKCSLMEEIITKKDNSNPSSTEEVLYSNLEELIIIDMDKLNAIWKSQEALSLNSFSKLKKIEARDCPELIFLCQILSNTQSLEALIIDNCKYLQLIYGDTIPGTSTPHMHAGGFERLRFLFSASVVKCLDKLRNLEIRKCSLMEGMTKIEDDTPSGMVMFPNLEEMIIIDVDNLNAICHWQQLLSPDSFGKLKKIETRNCPELIFPCQILSNTEILETLIINDCKYLKQISGDLIPETSNSQMNVRGSDWPRVLFPASLTKNMYKLQNLDIRNCSMVEEIITIQENAAPFVEKVIFPNLEEVIIIDVDKLNAIWHWQNALPPNSFGKLKKIEIRNCPELIFPSQMLSNTLSLETLKINNCKYLQQISGDIIPETSNSQMHVGGSERLHVLLPTSVAKNLYKLQILEIKKCSMVEVIIMTEINTPPPVSEKVDIFPNLEEMVIVDVDMLNMIVDSKQQLSSNSFDRLKKIEIRNCPELTSILPCYKRSTIQNLETFTIIDCKSLLEIFPLPGTNTRETCGRTVNCTENLHNLADLPAAMHVEGCERLKYLFPPSAEEGLGKFQKIVIEKCSVMEEIVMVEESSHCSLLEEVKWQSHKSLCNLRSLRIANCENFSKVLPFNVLKSLIVLEELEIQNCQSAEVVFDLEGINTEKVNNMQGIRLEKLILESLPKLKHVWSKTPEEVVTFHELKVLRACGCPCLTSLFPANIGKSLKKLKELTISDCGLEEIVEKEEGQTLSINFQFRKLHSLEISDVPKLKSFYPGEYTTYWPAVKRIHVCIPSEVSVFGTKLFKKHQKHNLDISNQQPIFLVERINTDLEELALNRVDMPLGFLAIFPQLRNLCIQFIDDDHANFPYQWLESIANLRKLTVKSSSFKEIFPSENSEEQIGNDVQLNELSLQFLSQLECICKEGYVAETILSVLGSLYVVECHCLKNLVPSSVCFSHLTHLEVHKCVGLFYLVTSTTAKSLIKLRTLKITECAMIKEIVADDVDNAEQEIVFADLELLELRMLSSLGSFCLKNHTFKFPSLNKLVVSECPQMKMFCLGDLTTPLLARVLMTMDDEGRWEGDLNTTIK 2154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01271 2154 Gene3D - 309 399 IPR042197 -
Bva01g01271 2154 PANTHER - 1764 1844 - -
Bva01g01271 2154 PANTHER RPP4C3 1764 1844 - -
Bva01g01271 2154 SUPERFAMILY RNI-like 1892 2123 - -
Bva01g01271 2154 Gene3D Ribonuclease Inhibitor 1378 1599 IPR032675 -
Bva01g01271 2154 PANTHER RPP4C3 1618 1661 - -
Bva01g01271 2154 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 411 IPR027417 -
Bva01g01271 2154 PANTHER RPP4C3 1046 1097 - -
Bva01g01271 2154 PANTHER RPP4C3 1369 1452 - -
Bva01g01271 2154 PANTHER RPP4C3 2001 2152 - -
Bva01g01271 2154 Coils Coil 26 53 - -
Bva01g01271 2154 SMART AAA_5 172 304 IPR003593 -
Bva01g01271 2154 Gene3D Ribonuclease Inhibitor 464 683 IPR032675 -
Bva01g01271 2154 SUPERFAMILY RNI-like 1624 1837 - -
Bva01g01271 2154 SUPERFAMILY RNI-like 1343 1584 - -
Bva01g01271 2154 PANTHER - 23 1031 - -
Bva01g01271 2154 PANTHER - 1228 1367 - -
Bva01g01271 2154 MobiDBLite consensus disorder prediction 91 116 - -
Bva01g01271 2154 SUPERFAMILY L domain-like 470 903 - -
Bva01g01271 2154 PRINTS Disease resistance protein signature 249 263 - -
Bva01g01271 2154 PRINTS Disease resistance protein signature 344 358 - -
Bva01g01271 2154 PRINTS Disease resistance protein signature 615 631 - -
Bva01g01271 2154 PRINTS Disease resistance protein signature 175 190 - -
Bva01g01271 2154 PANTHER RPP4C3 23 1031 - -
Bva01g01271 2154 PANTHER RPP4C3 1228 1367 - -
Bva01g01271 2154 Gene3D Ribonuclease Inhibitor 1621 1856 IPR032675 -
Bva01g01271 2154 Gene3D Ribonuclease Inhibitor 1199 1367 IPR032675 -
Bva01g01271 2154 Gene3D Ribonuclease Inhibitor 951 1198 IPR032675 -
Bva01g01271 2154 PANTHER - 1369 1452 - -
Bva01g01271 2154 SUPERFAMILY L domain-like 937 1224 - -
Bva01g01271 2154 Coils Coil 107 127 - -
Bva01g01271 2154 Gene3D - 145 304 IPR027417 -
Bva01g01271 2154 Coils Coil 2070 2090 - -
Bva01g01271 2154 PANTHER - 1046 1097 - -
Bva01g01271 2154 PANTHER - 2001 2152 - -
Bva01g01271 2154 PANTHER - 1618 1661 - -
Bva01g01271 2154 Pfam NB-ARC domain 161 397 IPR002182 GO:0043531
Bva01g01271 2154 Gene3D Ribonuclease Inhibitor 684 926 IPR032675 -
Bva01g01271 2154 Gene3D Ribonuclease Inhibitor 1857 2042 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01271 Bva-Chr1 13516363 13526874 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01271 172 638 WRKY Transcription Factor Family AT5G45050 22.364 6.94e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01271 - - aip:107625541 925.62