Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01255 ATGGCTCGCTCTATTCCTCTGGTTTCCACCATTTTTGTCCTCCTGCTCCTTCTCGTGGCAACTGAGATGAGGCCAATGGTTGCAGAAGCAAGAACCTGTGACTCTCAGAGCCACCGTTTCAAGGGAGCTTGTGTGAGTGACACTAACTGTGCCTCTGTTTGCAAAACCGAGGGTTTCCCAGATGGACATTGCCGTGGCTTCCGTCGCCGATGCTTCTGCAAGAAACCTTGTTA 233 0.515 MARSIPLVSTIFVLLLLLVATEMRPMVAEARTCDSQSHRFKGACVSDTNCASVCKTEGFPDGHCRGFRRRCFCKKPC 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01255 77 CDD Knot1 42 73 IPR003614 GO:0006952
Bva01g01255 77 ProSitePatterns Gamma-thionins family signature. 31 54 IPR008176 GO:0006952
Bva01g01255 77 PANTHER DEFENSIN-LIKE PROTEIN 1 1 77 - -
Bva01g01255 77 Pfam Gamma-thionin family 31 77 - -
Bva01g01255 77 PANTHER DEFENSIN-LIKE PROTEIN P322 1 77 - -
Bva01g01255 77 SMART gth_4 32 77 IPR003614 GO:0006952
Bva01g01255 77 Gene3D - 31 77 IPR036574 -
Bva01g01255 77 PRINTS Purothionin signature 62 76 IPR008176 GO:0006952
Bva01g01255 77 PRINTS Purothionin signature 32 47 IPR008176 GO:0006952
Bva01g01255 77 SUPERFAMILY Scorpion toxin-like 31 77 IPR036574 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01255 Bva-Chr1 13211002 13211356 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01255 1 77 Plant Defensins Gene Families AT2G02100 58.442 2.28e-31 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01255 - - gmx:100798577 93.9745