Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01250 ATGGATTTCAACGTTTTCCACCTTCTTTTATCATCACTCCTAATTTGTTTGCTCTTACAGAAACCAGCCTATGCCATAAAAAAGTCTTACATTGTGTACTTAGGAGCACATTCTCATGGCCCTAGCCCTTCTGATTTTGAAGCTGAATCTGCCACGAATTCTCATTACGAGTTATTAGGCTCACACGTGGGAAGCCTAGAGAAGGCAAAAGAATCAATATTTTACTCGTACAATAGACACATCAATGGCTTTGCTGCAATGCTTGAGGAGGAAGAAGCAAAAGATATTGCAAAAAATCCAAAAGTTGTGTCTGTTTTCCTGAACAAAATGATGAAACTGCATACAACCAGAACATGGCAATTTCTTGGATTGGAGAAAGATAGAATAGTTCCCAAAGACTCTATTTGGGAGAAAGCTAGATATGGTGAAGATATAATCATTGGCAACCTAGACACAGGTGTTTGGCCTGAATCAAAAAGCTTTGATGACAAAGGATTTGGCCGAATCCCATCAAAATGGCGCGGAGATGGAGCTTGCCAACTTGATAGATTGAATGGTTCAAATAGATTTCCTTGTAACAAGAAGCTAATTGGGGCCAGATCTTTCTACAAAGGTTATGAAGCAGCACTTGGTGAGTCTCTTAATGCATCTCTTACTACTGCACGAGACAACGAAGGGCATGGCACGCATACTTTGTCAACTGCAGGGGGTAATTTTGTTCCAGGAGTAACTGTTTTTGGTAATGGTAATGGCACTGCCAAAGGCGGATCTCCAAAGGCCAGAGTTGCCGCCTACAAGGTCTGCTGGCCTTCAGTCAATGGTGTTGGTGGATGCTTAGATGCAGATGTCTTAGCTGGTTTTGAAGCTGCTATAAGTGACCATGTTGATGTGCTTTCAGTTTCTGCTGGTTCAACTAGCCCTCAATATTTGTTTATAGACTCATTTGCCATAGGATCATTCCATGCAGTTGCCAAGGGTATAGTGGTAATTAACTCTGCAGGGAATGAGGGACCCGGACCCGGAACAGTTTCTAGTGCAGCACCATGGATGATCGCAGTTGCTGCTAGCTCAATAGACAGGAGCTTCACCAGCTACGTTGAACTTGGTAACAAGAAACAACTAAAGGGATCCAGTCTTTCAGTTAGGAGCTTTCCTTCTCATAAGCTTTATCCTTTGATTGATGCTAAGGATGCAAAACTAGCAAAAGCCAATGCTTCTGATGCTAAAACCTGTGCTGATGGAACCCTTGATCCTAAAAAGGTGAAAGGGAAAATACTGGTCTGCCTAGTTGAAGAAGGCAAGACAGGCGCAAGTGAACAATACCTGCAAGGTTTTCTTGCAGGTGCCGTGGGAGTGGTTTCGGCTAATGATGAGCACTCGGGGAATAAGATTTATGCCTTACCCTCTCCTCTACCATCttcaaatctcaattttaCAAATGGAGAATATGTTTATTCTTACCTACAACGTACCAAGAATCCTATGGCTTACCTAACTAAACCGAAAACGGAAGTCAATGTAAAGCCAAGTCCAATGATGGCTGAATTTTCATCGAGGGGACCTAATATTGTCCTACCATCGATCCTCAAGCCTGACGTCACTGCACCCGGGTTGGACATAATTGCTGCTTACTCAGAGGTACAAGGAAGTGTGTATGCATACATTGCAGATTCGGGAACTTCCATGTCCTGCCCTCATGTCGCTGGCATTGTTGGCCTTCTTAAAGCTCTTCACCCTCATTGGAGTCCTGCAGCAATACAATCTGCTATTATGACCACAGCAACCACGGTAGATGATGGTGGAAGGCCAATTCTAGACTCATTTTACAAAAAAGCAACTCCATTTAACTATGGTTCAGGACATATTCAACCTAACTTTGCAATGGACCCTGGACTGGTTTATGATCTAAACACAGTTGATTACTTGAACGTATTGTGTGCTTCTGGCTATAGCGAAGCAGAACTTATCACCTTTTACGACAGGCCTTATTCTTGCCCTAAGTCTTATAACTTGGCAGATTTTAACTACCCTTCAATCACTGTGCTTGATCTGAAGAAAACCCCTGTAACTGTTACTCGTACTGTTACAAATGTTGGATCTCCAAGCACATATAAGGTGTATGTCAAGAACCCTAAAGGAGTTTCGGTGTCAGTCAAGCCGAGTTCCTTGACATTTACGAAAGTTGGTGAAAAGAAGACATTCAAGATTATACTGCAAACCATGGGTGTGGCTAAGCCTGGAAGTTTTGTGTTTGGGGAGTTGTGTTGGTCAGATGGCAAGCACAAAGTGAGGAGTCCTCTAGTGGTCAAGCACAAATG 2318 0.4271 MDFNVFHLLLSSLLICLLLQKPAYAIKKSYIVYLGAHSHGPSPSDFEAESATNSHYELLGSHVGSLEKAKESIFYSYNRHINGFAAMLEEEEAKDIAKNPKVVSVFLNKMMKLHTTRTWQFLGLEKDRIVPKDSIWEKARYGEDIIIGNLDTGVWPESKSFDDKGFGRIPSKWRGDGACQLDRLNGSNRFPCNKKLIGARSFYKGYEAALGESLNASLTTARDNEGHGTHTLSTAGGNFVPGVTVFGNGNGTAKGGSPKARVAAYKVCWPSVNGVGGCLDADVLAGFEAAISDHVDVLSVSAGSTSPQYLFIDSFAIGSFHAVAKGIVVINSAGNEGPGPGTVSSAAPWMIAVAASSIDRSFTSYVELGNKKQLKGSSLSVRSFPSHKLYPLIDAKDAKLAKANASDAKTCADGTLDPKKVKGKILVCLVEEGKTGASEQYLQGFLAGAVGVVSANDEHSGNKIYALPSPLPSSNLNFTNGEYVYSYLQRTKNPMAYLTKPKTEVNVKPSPMMAEFSSRGPNIVLPSILKPDVTAPGLDIIAAYSEVQGSVYAYIADSGTSMSCPHVAGIVGLLKALHPHWSPAAIQSAIMTTATTVDDGGRPILDSFYKKATPFNYGSGHIQPNFAMDPGLVYDLNTVDYLNVLCASGYSEAELITFYDRPYSCPKSYNLADFNYPSITVLDLKKTPVTVTRTVTNVGSPSTYKVYVKNPKGVSVSVKPSSLTFTKVGEKKTFKIILQTMGVAKPGSFVFGELCWSDGKHKVRSPLVVKHK 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01250 772 CDD PA_subtilisin_like 365 498 - -
Bva01g01250 772 Pfam Peptidase inhibitor I9 29 114 IPR010259 -
Bva01g01250 772 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 114 IPR037045 -
Bva01g01250 772 PRINTS Subtilisin serine protease family (S8) signature 223 236 IPR015500 -
Bva01g01250 772 PRINTS Subtilisin serine protease family (S8) signature 142 161 IPR015500 -
Bva01g01250 772 PRINTS Subtilisin serine protease family (S8) signature 558 574 IPR015500 -
Bva01g01250 772 Gene3D Peptidase S8/S53 domain 144 641 IPR036852 GO:0004252|GO:0006508
Bva01g01250 772 ProSitePatterns Serine proteases, subtilase family, serine active site. 559 569 IPR023828 -
Bva01g01250 772 Pfam Subtilase family 142 602 IPR000209 GO:0006508|GO:0008236
Bva01g01250 772 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 22 770 - -
Bva01g01250 772 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 22 770 IPR045051 -
Bva01g01250 772 ProSiteProfiles Serine proteases, subtilase domain profile. 118 628 - -
Bva01g01250 772 Pfam Fibronectin type-III domain 673 769 IPR041469 -
Bva01g01250 772 SUPERFAMILY Subtilisin-like 113 632 IPR036852 GO:0004252|GO:0006508
Bva01g01250 772 Gene3D - 359 505 - -
Bva01g01250 772 Gene3D - 645 771 - -
Bva01g01250 772 CDD Peptidases_S8_3 112 595 IPR034197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01250 Bva-Chr1 13154352 13159900 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01250 18 770 Subtilisin-like Serine Gene Family AT5G59810 55.774 0.0 825
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01250 - - tcc:18593208 912.524