Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01239 aTGGCAGACATTCCTATGAACATGACAACCAATACTGTTCAGAGATTGGTAGATAGAGCCATAGATAAAGCTTATTATCTTTGTTgtttcaagaaaattattgaagactttgaagaggaaaagaaaacaatagaagCAAAATATACAGATGTCCAGAAAGATATTGAAGAGAACAAGAATGCAGTTAAGGATATTGTGCAGGAAGTCGATCTGTGGAAGAACAGAGCTGAGGATCTCATTGCCGAAGATACCAACCGCCGAAAGTCATGTCTTTTTCCTTGGTGTTACAATTGCATTTGGCAATATCAACGAGGAAAAGACTTGGCAGAGAAGATGCAAAGAATCAAAGAACTCATTCAAAATAGTAACTTCGCGAAAATTGGACGCCCTGCAGTACTTCCTAGCTGGGAATTCTATGCTTCACCGGATTTTATGTTCTTTGATAGCAGAAAATTGGTTTATGATAAGGTTTTGGCAGCACTCAAAAATGGTGAGAATTATATAACTGCACTGCATGGTACAGGGGGGTCAGGTAAGACCACATTGGCAGTCAAGGTTGGAGAAAtagttgaaaaggaaaagcattTTGACAGAGCCGTCATGGTTACTGTATCTAATAATCCAGATGTCAAAATGATTCATGATCATATTGCGAGGCCTTTGGGTGTGGAATTCAAACCGGAAGAAAATGATTTAGATAGAGCGAAGAGACTTTGGTCAAGGTTAACAAATGGTGAAAGGGTACTTATAGTACTAGATGATGTTTGGAAAAAgctcaaatttgaagaaattgggATACCCCACAATCACAAGGGTTGCTGCATTCTTATAACCACGCGTGATTTGAATGTTTGTCGTCTAATGGGTTGCCAAGATTCCATCATTAAACTGGACATCTTACCTGAAAATGAAGCTTGGGTTTTTTTCCAAAAGTATTCTGGTATCAATGATAATTCCCCGAAAAAGTTGAAGGATACTGCTGAAAAAATTGCTAAAGAATGTAAAGGCTTGCCAGTTGCACTTGCAGCACTAGCAAGCACTTTGAAGGGCCAAAATCTTGAAGACTGGAATGCTGCTATGAGAAGCTTGAAAAATCCTAGATCAGTTGATATTACTAATCATGAACTCAAAGAAGTGTACCAAAGATTGAAAGTAAGCTATGATTTTCTAAATCACGAGCATGCACAAAAGCTCTTCAAGCTCTGTTCGTTGTTTCCCGAAGATTATGAAATCCCTCTAGATGATTTGACCAGGTTTTCTATAGGGTTGGGACTATTTGGGGAGGTGGACTCATACACTACAGCAAGGGATGATATGCATAGAGCTAAGAAAAGGCTAATAGATTGTTGTTTATTAATGGAagttaatgaaagaaaatgtgtCAAAATGCATGATTTGATACGTGAAGTGGCCAAAGTGATAGCAAACAATGAGATTCATTTGATTGTGGGTCCAAAATGGAATCAAAATGATACTGAAAAATTGGGGGATATGAGATATTTGTATTGCCAAAACATGATTGATTTTCCTGAATA 1535 0.3544 MADIPMNMTTNTVQRLVDRAIDKAYYLCCFKKIIEDFEEEKKTIEAKYTDVQKDIEENKNAVKDIVQEVDLWKNRAEDLIAEDTNRRKSCLFPWCYNCIWQYQRGKDLAEKMQRIKELIQNSNFAKIGRPAVLPSWEFYASPDFMFFDSRKLVYDKVLAALKNGENYITALHGTGGSGKTTLAVKVGEIVEKEKHFDRAVMVTVSNNPDVKMIHDHIARPLGVEFKPEENDLDRAKRLWSRLTNGERVLIVLDDVWKKLKFEEIGIPHNHKGCCILITTRDLNVCRLMGCQDSIIKLDILPENEAWVFFQKYSGINDNSPKKLKDTAEKIAKECKGLPVALAALASTLKGQNLEDWNAAMRSLKNPRSVDITNHELKEVYQRLKVSYDFLNHEHAQKLFKLCSLFPEDYEIPLDDLTRFSIGLGLFGEVDSYTTARDDMHRAKKRLIDCCLLMEVNERKCVKMHDLIREVAKVIANNEIHLIVGPKWNQNDTEKLGDMRYLYCQNMIDFPE 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01239 511 Pfam NB-ARC domain 155 388 IPR002182 GO:0043531
Bva01g01239 511 Gene3D - 386 473 IPR036388 -
Bva01g01239 511 Coils Coil 34 82 - -
Bva01g01239 511 PANTHER - 31 479 - -
Bva01g01239 511 Gene3D - 140 299 IPR027417 -
Bva01g01239 511 Gene3D - 300 385 IPR042197 -
Bva01g01239 511 PRINTS Disease resistance protein signature 168 183 - -
Bva01g01239 511 PRINTS Disease resistance protein signature 242 256 - -
Bva01g01239 511 PRINTS Disease resistance protein signature 334 348 - -
Bva01g01239 511 PANTHER PHOSPHATASE, PUTATIVE-RELATED 31 479 - -
Bva01g01239 511 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 136 402 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01239 Bva-Chr1 12927576 12929111 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01239 173 478 WRKY Transcription Factor Family AT5G45050 26.730 2.93e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01239 - - mtr:MTR_1g031830 462.996