LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bva01g01238	ATGcttgaagaggaagaagcagaagaaatTGCAAaaaatccaaaagtTGTGTCTGTGTTCTTGAACAAAAAGAGGAAATTACACACCACTAGATCGTGGCAATTTCTTGGACTAGAGGAGAATGGAATACTTCCTAAAGACTCTATTTGGGAGAAGGCAAGATATGGTGAAGATACAATCATTGGAAAACTTGATACAGGTTTTGAGGCAAGACATGATGTGAAACCACAATTTACTAATGCACGTGATGTGGACGGGCATGGCTCGCATACTCTGTCAACTGCAGGAGGTAGTTTTGTTCCAGGAGTCAGTATTTTTGGTAACGGTTTTGGCACTGCCAAAGGTGGATCTCCAAAGGCAAGAGTTGCAGCCTACAAGGTCTGCTGGCCCGATATTAGTGAAACTATGCGTGGTGGATGCTTCGATGCAGATGTCTTAGCTGGTTTTGAAGCTGCTATAAGTGATAATGTTGATTTGCCAAGGGGTATAGTGGTTGTTAACTCTGCAGGGAATGAAGGACCCCGACCTGAAACCGTAGCTAGTGTGGTACCATGGATGATCACAGTTGCTGCTAGCACAATAGACAGAAGCTTTGCCAGCTATGTTGCACTTGGTGACAAGTCACACCTGAAgGGATCCAGTCTTTCACCCAAGGGCTTGCCATCTCAGAAGTTTTATCCTTTGATTAATGCTGAGGATGCTGAGCTAGCTAAAGCTAATGCCTCCGATGCATA	734	0.4223	MLEEEEAEEIAKNPKVVSVFLNKKRKLHTTRSWQFLGLEENGILPKDSIWEKARYGEDTIIGKLDTGFEARHDVKPQFTNARDVDGHGSHTLSTAGGSFVPGVSIFGNGFGTAKGGSPKARVAAYKVCWPDISETMRGGCFDADVLAGFEAAISDNVDLPRGIVVVNSAGNEGPRPETVASVVPWMITVAASTIDRSFASYVALGDKSHLKGSSLSPKGLPSQKFYPLINAEDAELAKANASDA	244

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bva01g01238	244	Gene3D	-	195	242	-	-
	Bva01g01238	244	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	77	158	IPR045051	-
	Bva01g01238	244	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	2	68	IPR045051	-
	Bva01g01238	244	PANTHER	SUBTILISIN-LIKE PROTEASE SBT5.4	77	158	-	-
	Bva01g01238	244	PANTHER	SUBTILISIN-LIKE PROTEASE SBT5.4	161	240	-	-
	Bva01g01238	244	Gene3D	Peptidase S8/S53 domain	161	194	IPR036852	GO:0004252\|GO:0006508
	Bva01g01238	244	Gene3D	Peptidase S8/S53 domain	72	158	IPR036852	GO:0004252\|GO:0006508
	Bva01g01238	244	SUPERFAMILY	Subtilisin-like	27	229	IPR036852	GO:0004252\|GO:0006508
	Bva01g01238	244	ProSiteProfiles	Serine proteases, subtilase domain profile.	32	244	-	-
	Bva01g01238	244	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	161	240	IPR045051	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Bva01g01238	Bva-Chr1	12881797	12884223	Proximal

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bva01g01238	2	244	Subtilisin-like Serine Gene Family	AT2G04160	46.835	2.64e-81	257

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bva01g01238	-		-	vvi:100251507	293.893

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