Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01184 ATGATTTGGCATCCCTGCCTTTCCTTGTTAATCGTGGTGCTGGTACTGCTTGTGAATCCTGGAAGCAGCCACCGTAGTTGCAAGAAACATACATGTGGACCTCATGGCCCGTTGATTCAATTTCCTTTCTATCTCATCGACGCCAACACTACTTCCTCTGACTATCCTGCTGGGTTTGGTGTATATTGCACAGATATAAATAAGGCAATGCTTGAGCTGCCAGCATTTTCATCTCCAGTAAACCTCTCAATTGAAACAATAGATTACGAGGATCAATCTATAGATGTGACTGACCCAGAAGGTTGCCTTCCCCGGCAGTTcctaaaaatcaacaaatcttcaatttttcactCTCACTATGAAGTTGATACAAGTACATCAGCGACTTTCTTCAACTGTTCTTATTCTTCGCAAGATCAAGCCTATTGCACAATCCGAGTTTTATCCTCCAGCGATGATGTTGCTACAGCGGGTGTAGAATCATGTTCCAAGATGTTTGATGCAACATACAATTCTGAATATACTACTGCCTTGAGATTGGAATGGTCAAAACCAAATTCTTCTTATGTTGAAGTTGAATGTCCGAATTCACGATTCAGATCTACGACACTAACAGCTGCAGGTGGAATAATAGGCTCAGTGCTTGTGATCATTGCCCTGTTTTACAtctattacaaatttaaaaccaaGGGAGAAGATCAGGCAAgagtagaaatttttttggaggATTACAGGTCACAGAGGCCTACAAGATTCTCATATGCCGATATTAAGAGAATCACAAATGGTCTTAAGAACAAGTTGGGTGAAGGAGCTCATGGAGTTGTCTACAAAGGTAAGTTATCTGAAAAAATTGTTGTTGCTGTGAAGATACTCAACAATACAGAAGGCAATGGGAAAGAGTTCATCAATGAAGTGGGAACTATGGGCAAGATCCATCATGTTAATGTGGTTCGCTTGCTTGGCTTTTGTGCTCATGGAGTCCACCGtgctttaatttatgatttctttccACATGGTTCTTTGCAGAACTTCATATCCCCACCAGACAATAAGCAAACCTTCCTTGGATGGGAGAAGCTGGAACAAATTGCTCTTGGTGTAGCAAAAGGGATTGAGTACCTTCACCAAGGATGTGATCAACaaattcttcactttgacatcaATCCACATAACGTTTTACTTGATGATGACTTTACTCccaaaattattgattttggtCTAGCAAAATTATATTCTAGAAATCGAAGCACGGTGTCAATGACAGCAGCAAGGGGAACTTTAGGCTACATTGCTCCagaaattttctctaaaaattttGGTCATGTCTCTTACAAGTCTGATATTTATAGTTATGGAATGTTGTTGCTAGAAATAGTagggggaagaaaaaaaataagcagaAGTcgtgaaattgaaattttataccCAGAATGGATCCATAATTTAATTGAGGGAAGAGGAGATATACGCATCCACATTGAGAATGAGGGAGACATTAAGATTGCTAAGAAACTTGCAACTGTAGGACTGTGGTGCATTCAATGGCATCCTACTAATCGTCCATCCATTAGGAATGTGTTACAAATGCTTGAAGGAGAGGGAGACAAGTTAAAGGTGCCCCCTAATCCTTTTGCCTCTACTACTTCCACAAGTTCTACAGCAATTACTCCAGGAAGACATCTGGGGTTGGAGTTGGAAGCCATCCATGAATTAGAATA 1721 0.3678 MIWHPCLSLLIVVLVLLVNPGSSHRSCKKHTCGPHGPLIQFPFYLIDANTTSSDYPAGFGVYCTDINKAMLELPAFSSPVNLSIETIDYEDQSIDVTDPEGCLPRQFLKINKSSIFHSHYEVDTSTSATFFNCSYSSQDQAYCTIRVLSSSDDVATAGVESCSKMFDATYNSEYTTALRLEWSKPNSSYVEVECPNSRFRSTTLTAAGGIIGSVLVIIALFYIYYKFKTKGEDQARVEIFLEDYRSQRPTRFSYADIKRITNGLKNKLGEGAHGVVYKGKLSEKIVVAVKILNNTEGNGKEFINEVGTMGKIHHVNVVRLLGFCAHGVHRALIYDFFPHGSLQNFISPPDNKQTFLGWEKLEQIALGVAKGIEYLHQGCDQQILHFDINPHNVLLDDDFTPKIIDFGLAKLYSRNRSTVSMTAARGTLGYIAPEIFSKNFGHVSYKSDIYSYGMLLLEIVGGRKKISRSREIEILYPEWIHNLIEGRGDIRIHIENEGDIKIAKKLATVGLWCIQWHPTNRPSIRNVLQMLEGEGDKLKVPPNPFASTTSTSSTAITPGRHLGLELEAIHELE 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01184 573 Gene3D Transferase(Phosphotransferase) domain 1 337 540 - -
Bva01g01184 573 Pfam Protein kinase domain 265 529 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g01184 573 PANTHER RECEPTOR-LIKE KINASE 201 571 - -
Bva01g01184 573 PANTHER RECEPTOR-LIKE KINASE 15 194 - -
Bva01g01184 573 ProSiteProfiles Protein kinase domain profile. 262 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g01184 573 Gene3D Phosphorylase Kinase; domain 1 238 336 - -
Bva01g01184 573 Pfam Wall-associated receptor kinase galacturonan-binding 27 98 IPR025287 GO:0030247
Bva01g01184 573 PANTHER RUST RESISTANCE KINASE LR10-RELATED 15 194 IPR045874 GO:0004672
Bva01g01184 573 SUPERFAMILY Protein kinase-like (PK-like) 244 532 IPR011009 -
Bva01g01184 573 PANTHER RUST RESISTANCE KINASE LR10-RELATED 201 571 IPR045874 GO:0004672
Bva01g01184 573 ProSitePatterns Protein kinases ATP-binding region signature. 268 290 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01184 Bva-Chr1 10860890 10862746 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01184 206 553 Receptor kinase-like Gene Family AT1G66910 45.304 8.53e-99 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Bva01g01184 Pkinase 3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01184 - - gmx:100819302 619.002